RNA–Protein interactions for RNA: ENST00000489446.1

KLHL29-204, Transcript of kelch like family member 29, humanhuman

TSL 1 (best)

Gene KLHL29, Length 2,456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL29-204ENST00000489446 DLC1Q96QB1 1528 aa18.39■□□□□ 0.53
KLHL29-204ENST00000489446 FRAT1Q92837 279 aaPredicted RBP18.39■□□□□ 0.53
KLHL29-204ENST00000489446 ZBTB47Q9UFB7 747 aaPredicted RBP18.39■□□□□ 0.53
KLHL29-204ENST00000489446 PLEKHF1Q96S99 279 aa18.38■□□□□ 0.53
KLHL29-204ENST00000489446 COG6Q9Y2V7 657 aa18.38■□□□□ 0.53
KLHL29-204ENST00000489446 KIF20BQ96Q89 1820 aa18.38■□□□□ 0.53
KLHL29-204ENST00000489446 NRXN3Q9Y4C0 1643 aa18.37■□□□□ 0.53
KLHL29-204ENST00000489446 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
KLHL29-204ENST00000489446 ZMYM3Q14202 1370 aa18.36■□□□□ 0.53
KLHL29-204ENST00000489446 BCL2L13Q9BXK5 485 aa18.36■□□□□ 0.53
KLHL29-204ENST00000489446 IGHDP01880 384 aa18.35■□□□□ 0.53
KLHL29-204ENST00000489446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
KLHL29-204ENST00000489446 TNNQ9UQP3 1299 aa18.35■□□□□ 0.53
KLHL29-204ENST00000489446 MYH16Q9H6N6 1097 aa18.34■□□□□ 0.53
KLHL29-204ENST00000489446 METP08581 1390 aa18.34■□□□□ 0.53
KLHL29-204ENST00000489446 TMPOP42166 694 aaKnown RBP18.34■□□□□ 0.53
KLHL29-204ENST00000489446 ESF1Q9H501 851 aaKnown RBP18.34■□□□□ 0.53
KLHL29-204ENST00000489446 FBLN1P23142 703 aa18.33■□□□□ 0.53
KLHL29-204ENST00000489446 RGS3P49796 1198 aa18.33■□□□□ 0.53
KLHL29-204ENST00000489446 CLUAP1Q96AJ1 413 aa18.33■□□□□ 0.53
KLHL29-204ENST00000489446 TRIM35Q9UPQ4 493 aa18.33■□□□□ 0.52
KLHL29-204ENST00000489446 PNPLA6Q8IY17 1366 aa18.33■□□□□ 0.52
KLHL29-204ENST00000489446 DIAPH1O60610 1272 aaKnown RBP18.32■□□□□ 0.52
KLHL29-204ENST00000489446 RLBP1P12271 317 aa18.32■□□□□ 0.52
KLHL29-204ENST00000489446 TSR2Q969E8 191 aaKnown RBP18.32■□□□□ 0.52
KLHL29-204ENST00000489446 ATP7BP35670 1465 aa18.32■□□□□ 0.52
KLHL29-204ENST00000489446 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
KLHL29-204ENST00000489446 TXNDC2Q86VQ3 553 aa18.31■□□□□ 0.52
KLHL29-204ENST00000489446 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.31■□□□□ 0.52
KLHL29-204ENST00000489446 WASLO00401 505 aaPredicted RBP18.3■□□□□ 0.52
KLHL29-204ENST00000489446 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
KLHL29-204ENST00000489446 MAP2P11137 1827 aaKnown RBP18.29■□□□□ 0.52
KLHL29-204ENST00000489446 FAM161AQ3B820 660 aa18.29■□□□□ 0.52
KLHL29-204ENST00000489446 POLKQ9UBT6 870 aa18.29■□□□□ 0.52
KLHL29-204ENST00000489446 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
KLHL29-204ENST00000489446 PPIP5K1Q6PFW1 1433 aa18.28■□□□□ 0.52
KLHL29-204ENST00000489446 RIPK4P57078 832 aa18.27■□□□□ 0.52
KLHL29-204ENST00000489446 EXOSC9Q06265 439 aaKnown RBP18.27■□□□□ 0.52
KLHL29-204ENST00000489446 NCKAP5LQ9HCH0 1330 aa18.27■□□□□ 0.52
KLHL29-204ENST00000489446 CPSF1Q10570 1443 aaKnown RBP18.27■□□□□ 0.51
KLHL29-204ENST00000489446 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
KLHL29-204ENST00000489446 BRPF3Q9ULD4 1205 aa18.26■□□□□ 0.51
KLHL29-204ENST00000489446 TNRQ92752 1358 aa18.26■□□□□ 0.51
KLHL29-204ENST00000489446 LRRC7Q96NW7 1537 aa18.25■□□□□ 0.51
KLHL29-204ENST00000489446 CEBPAP49715 358 aaPredicted RBP18.25■□□□□ 0.51
KLHL29-204ENST00000489446 PCDHB15Q9Y5E8 787 aa18.25■□□□□ 0.51
KLHL29-204ENST00000489446 KNDC1Q76NI1 1749 aa18.25■□□□□ 0.51
KLHL29-204ENST00000489446 CDC42BPGQ6DT37 1551 aa18.25■□□□□ 0.51
KLHL29-204ENST00000489446 NME9Q86XW9 330 aa18.25■□□□□ 0.51
KLHL29-204ENST00000489446 ZRANB1Q9UGI0 708 aa18.25■□□□□ 0.51
KLHL29-204ENST00000489446 NEFMP07197 916 aa18.24■□□□□ 0.51
KLHL29-204ENST00000489446 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
KLHL29-204ENST00000489446 EDC4Q6P2E9 1401 aaKnown RBP18.24■□□□□ 0.51
KLHL29-204ENST00000489446 UBR1Q8IWV7 1749 aa18.24■□□□□ 0.51
KLHL29-204ENST00000489446 FCHSD2O94868 740 aa18.23■□□□□ 0.51
KLHL29-204ENST00000489446 CT47B1P0C2W7 299 aaPredicted RBP18.23■□□□□ 0.51
KLHL29-204ENST00000489446 EMILIN1Q9Y6C2 1016 aa18.23■□□□□ 0.51
KLHL29-204ENST00000489446 TECPR2O15040 1411 aa18.23■□□□□ 0.51
KLHL29-204ENST00000489446 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
KLHL29-204ENST00000489446 RSPH6AQ9H0K4 717 aa18.23■□□□□ 0.51
KLHL29-204ENST00000489446 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
KLHL29-204ENST00000489446 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
KLHL29-204ENST00000489446 TMEM2Q9UHN6 1383 aa18.22■□□□□ 0.51
KLHL29-204ENST00000489446 IL16Q14005 1332 aa18.22■□□□□ 0.51
KLHL29-204ENST00000489446 PRKAR2BP31323 418 aa18.22■□□□□ 0.51
KLHL29-204ENST00000489446 ZKSCAN2Q63HK3 967 aa18.22■□□□□ 0.51
KLHL29-204ENST00000489446 SMC4Q9NTJ3 1288 aa18.22■□□□□ 0.51
KLHL29-204ENST00000489446 CPS1P31327 1500 aa18.21■□□□□ 0.51
KLHL29-204ENST00000489446 AAMPQ13685 434 aa18.21■□□□□ 0.51
KLHL29-204ENST00000489446 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
KLHL29-204ENST00000489446 USP35Q9P2H5 1018 aa18.21■□□□□ 0.51
KLHL29-204ENST00000489446 HMOX1P09601 288 aa18.21■□□□□ 0.5
KLHL29-204ENST00000489446 MVPQ14764 893 aaKnown RBP18.21■□□□□ 0.5
KLHL29-204ENST00000489446 SIRT1Q96EB6 747 aa18.21■□□□□ 0.5
KLHL29-204ENST00000489446 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.5
KLHL29-204ENST00000489446 MON2Q7Z3U7 1717 aa18.2■□□□□ 0.5
KLHL29-204ENST00000489446 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
KLHL29-204ENST00000489446 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
KLHL29-204ENST00000489446 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
KLHL29-204ENST00000489446 PRR36Q9H6K5 1346 aa18.19■□□□□ 0.5
KLHL29-204ENST00000489446 PHACTR3Q96KR7 559 aa18.19■□□□□ 0.5
KLHL29-204ENST00000489446 ROBO2Q9HCK4 1378 aa18.19■□□□□ 0.5
KLHL29-204ENST00000489446 FTSJ3Q8IY81 847 aaKnown RBP18.18■□□□□ 0.5
KLHL29-204ENST00000489446 DDRGK1Q96HY6 314 aa18.18■□□□□ 0.5
KLHL29-204ENST00000489446 ADAMTS13Q76LX8 1427 aa18.18■□□□□ 0.5
KLHL29-204ENST00000489446 VIRMAQ69YN4 1812 aaKnown RBP18.18■□□□□ 0.5
KLHL29-204ENST00000489446 AKAP12Q02952 1782 aa18.18■□□□□ 0.5
KLHL29-204ENST00000489446 TRIM27P14373 513 aa18.18■□□□□ 0.5
KLHL29-204ENST00000489446 IL13P35225 146 aa18.17■□□□□ 0.5
KLHL29-204ENST00000489446 LTKP29376 864 aa18.17■□□□□ 0.5
KLHL29-204ENST00000489446 ITSN1Q15811 1721 aa18.17■□□□□ 0.5
KLHL29-204ENST00000489446 C3P01024 1663 aa18.16■□□□□ 0.5
KLHL29-204ENST00000489446 RRS1Q15050 365 aaKnown RBP18.16■□□□□ 0.5
KLHL29-204ENST00000489446 COG3Q96JB2 828 aa18.16■□□□□ 0.5
KLHL29-204ENST00000489446 AATKQ6ZMQ8 1374 aa18.16■□□□□ 0.5
KLHL29-204ENST00000489446 CDK12Q9NYV4 1490 aaPredicted RBP18.15■□□□□ 0.5
KLHL29-204ENST00000489446 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
KLHL29-204ENST00000489446 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.15■□□□□ 0.5
KLHL29-204ENST00000489446 NFE2L2Q16236 605 aa18.14■□□□□ 0.5
KLHL29-204ENST00000489446 ATF7IPQ6VMQ6 1270 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms