RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
COL4A5-206ENST00000489230 TERF2IPQ9NYB0 399 aa17.31■□□□□ 0.36
COL4A5-206ENST00000489230 SBNO1A3KN83 1393 aa17.3■□□□□ 0.36
COL4A5-206ENST00000489230 POLR3AO14802 1390 aaPredicted RBP17.3■□□□□ 0.36
COL4A5-206ENST00000489230 NINLQ9Y2I6 1382 aa17.3■□□□□ 0.36
COL4A5-206ENST00000489230 FNBP4Q8N3X1 1017 aaPredicted RBP17.3■□□□□ 0.36
COL4A5-206ENST00000489230 XPCQ01831 940 aaPredicted RBP17.29■□□□□ 0.36
COL4A5-206ENST00000489230 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
COL4A5-206ENST00000489230 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
COL4A5-206ENST00000489230 USP32Q8NFA0 1604 aa17.29■□□□□ 0.36
COL4A5-206ENST00000489230 SPATA31A3Q5VYP0 1347 aa17.28■□□□□ 0.36
COL4A5-206ENST00000489230 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
COL4A5-206ENST00000489230 ATRNO75882 1429 aa17.28■□□□□ 0.36
COL4A5-206ENST00000489230 SLC12A5Q9H2X9 1139 aa17.27■□□□□ 0.36
COL4A5-206ENST00000489230 RGPD8O14715 1765 aaPredicted RBP17.27■□□□□ 0.35
COL4A5-206ENST00000489230 ITSN1Q15811 1721 aa17.27■□□□□ 0.35
COL4A5-206ENST00000489230 PXDNQ92626 1479 aa17.26■□□□□ 0.35
COL4A5-206ENST00000489230 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
COL4A5-206ENST00000489230 ARHGEF10O15013 1369 aa17.26■□□□□ 0.35
COL4A5-206ENST00000489230 COL22A1Q8NFW1 1626 aaPredicted RBP17.25■□□□□ 0.35
COL4A5-206ENST00000489230 SRCAPQ6ZRS2 3230 aa17.25■□□□□ 0.35
COL4A5-206ENST00000489230 CCDC125Q86Z20 511 aa17.24■□□□□ 0.35
COL4A5-206ENST00000489230 ABTB2Q8N961 1025 aa17.23■□□□□ 0.35
COL4A5-206ENST00000489230 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
COL4A5-206ENST00000489230 CPSF1Q10570 1443 aaKnown RBP17.21■□□□□ 0.35
COL4A5-206ENST00000489230 TNS3Q68CZ2 1445 aa17.21■□□□□ 0.35
COL4A5-206ENST00000489230 NLRP13Q86W25 1043 aa17.21■□□□□ 0.35
COL4A5-206ENST00000489230 GJD4Q96KN9 370 aaPredicted RBP17.21■□□□□ 0.35
COL4A5-206ENST00000489230 POLR3GLQ9BT43 218 aa17.21■□□□□ 0.35
COL4A5-206ENST00000489230 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.34
COL4A5-206ENST00000489230 BCL9LQ86UU0 1499 aa17.2■□□□□ 0.34
COL4A5-206ENST00000489230 HAP1P54257 671 aaPredicted RBP17.2■□□□□ 0.34
COL4A5-206ENST00000489230 TOPAZ1Q8N9V7 1692 aa17.2■□□□□ 0.34
COL4A5-206ENST00000489230 USP6P35125 1406 aa17.19■□□□□ 0.34
COL4A5-206ENST00000489230 TTC21BQ7Z4L5 1316 aa17.19■□□□□ 0.34
COL4A5-206ENST00000489230 MARF1Q9Y4F3 1742 aaKnown RBP17.18■□□□□ 0.34
COL4A5-206ENST00000489230 ANKRD36BQ8N2N9 1353 aa17.17■□□□□ 0.34
COL4A5-206ENST00000489230 C11orf95C9JLR9 678 aaPredicted RBP17.17■□□□□ 0.34
COL4A5-206ENST00000489230 NLRP6P59044 892 aa17.17■□□□□ 0.34
COL4A5-206ENST00000489230 EP400Q96L91 3159 aa17.16■□□□□ 0.34
COL4A5-206ENST00000489230 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
COL4A5-206ENST00000489230 SSH2Q76I76 1423 aa17.15■□□□□ 0.34
COL4A5-206ENST00000489230 EDC4Q6P2E9 1401 aaKnown RBP17.14■□□□□ 0.33
COL4A5-206ENST00000489230 SF3B2Q13435 895 aaKnown RBP17.14■□□□□ 0.33
COL4A5-206ENST00000489230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.14■□□□□ 0.33
COL4A5-206ENST00000489230 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
COL4A5-206ENST00000489230 A0A1W2PP64 1363 aa17.14■□□□□ 0.33
COL4A5-206ENST00000489230 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.13■□□□□ 0.33
COL4A5-206ENST00000489230 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
COL4A5-206ENST00000489230 KCNH5Q8NCM2 988 aa17.13■□□□□ 0.33
COL4A5-206ENST00000489230 CABLES1Q8TDN4 633 aa17.13■□□□□ 0.33
COL4A5-206ENST00000489230 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
COL4A5-206ENST00000489230 NUTM2GQ5VZR2 741 aa17.12■□□□□ 0.33
COL4A5-206ENST00000489230 PANK3Q9H999 370 aa17.12■□□□□ 0.33
COL4A5-206ENST00000489230 SLIT2O94813 1529 aa17.11■□□□□ 0.33
COL4A5-206ENST00000489230 TRPM3Q9HCF6 1732 aaPredicted RBP17.1■□□□□ 0.33
COL4A5-206ENST00000489230 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
COL4A5-206ENST00000489230 GCP02774 474 aa17.1■□□□□ 0.33
COL4A5-206ENST00000489230 GLI3P10071 1580 aa17.1■□□□□ 0.33
COL4A5-206ENST00000489230 COG3Q96JB2 828 aa17.09■□□□□ 0.33
COL4A5-206ENST00000489230 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
COL4A5-206ENST00000489230 CCDC9Q9Y3X0 531 aaKnown RBP17.09■□□□□ 0.33
COL4A5-206ENST00000489230 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
COL4A5-206ENST00000489230 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
COL4A5-206ENST00000489230 AKAP12Q02952 1782 aa17.08■□□□□ 0.33
COL4A5-206ENST00000489230 USP19O94966 1318 aa17.08■□□□□ 0.32
COL4A5-206ENST00000489230 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
COL4A5-206ENST00000489230 WASHC2AQ641Q2 1341 aa17.08■□□□□ 0.32
COL4A5-206ENST00000489230 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.32
COL4A5-206ENST00000489230 NME9Q86XW9 330 aa17.08■□□□□ 0.32
COL4A5-206ENST00000489230 SEPT12Q8IYM1 358 aa17.08■□□□□ 0.32
COL4A5-206ENST00000489230 KNSTRNQ9Y448 316 aa17.08■□□□□ 0.32
COL4A5-206ENST00000489230 ALS2Q96Q42 1657 aa17.07■□□□□ 0.32
COL4A5-206ENST00000489230 FYB1O15117 783 aa17.07■□□□□ 0.32
COL4A5-206ENST00000489230 FAM83GA6ND36 823 aa17.06■□□□□ 0.32
COL4A5-206ENST00000489230 VPS72Q15906 364 aa17.06■□□□□ 0.32
COL4A5-206ENST00000489230 ZC3H6P61129 1189 aaKnown RBP17.05■□□□□ 0.32
COL4A5-206ENST00000489230 PRDM11Q9NQV5 511 aa17.05■□□□□ 0.32
COL4A5-206ENST00000489230 A0A0G2JS52 829 aa17.04■□□□□ 0.32
COL4A5-206ENST00000489230 MYT1Q01538 1121 aa17.04■□□□□ 0.32
COL4A5-206ENST00000489230 BRWD3Q6RI45 1802 aa17.04■□□□□ 0.32
COL4A5-206ENST00000489230 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
COL4A5-206ENST00000489230 CPDO75976 1380 aa17.03■□□□□ 0.32
COL4A5-206ENST00000489230 KRT27Q7Z3Y8 459 aa17.03■□□□□ 0.32
COL4A5-206ENST00000489230 NSD3Q9BZ95 1437 aa17.03■□□□□ 0.32
COL4A5-206ENST00000489230 GGNBP2Q9H3C7 697 aa17.01■□□□□ 0.31
COL4A5-206ENST00000489230 NWD2Q9ULI1 1742 aa17.01■□□□□ 0.31
COL4A5-206ENST00000489230 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
COL4A5-206ENST00000489230 PLCH1Q4KWH8 1693 aa17.01■□□□□ 0.31
COL4A5-206ENST00000489230 BAG6P46379 1132 aa17■□□□□ 0.31
COL4A5-206ENST00000489230 EVA1CP58658 441 aa17■□□□□ 0.31
COL4A5-206ENST00000489230 ARHGEF25Q86VW2 580 aa17■□□□□ 0.31
COL4A5-206ENST00000489230 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
COL4A5-206ENST00000489230 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
COL4A5-206ENST00000489230 BTG4Q9NY30 223 aa16.99■□□□□ 0.31
COL4A5-206ENST00000489230 NSD2O96028 1365 aa16.99■□□□□ 0.31
COL4A5-206ENST00000489230 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
COL4A5-206ENST00000489230 SOX12O15370 315 aa16.98■□□□□ 0.31
COL4A5-206ENST00000489230 AATKQ6ZMQ8 1374 aa16.98■□□□□ 0.31
COL4A5-206ENST00000489230 PIK3C2AO00443 1686 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms