RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 C8orf34Q49A92 452 aa25.23■■□□□ 1.63
SYNGR1-207ENST00000489206 PANK1Q8TE04 598 aa25.23■■□□□ 1.63
SYNGR1-207ENST00000489206 NRXN3Q9Y4C0 1643 aa25.22■■□□□ 1.63
SYNGR1-207ENST00000489206 PNNQ9H307 717 aaKnown RBP25.22■■□□□ 1.63
SYNGR1-207ENST00000489206 COG6Q9Y2V7 657 aa25.22■■□□□ 1.63
SYNGR1-207ENST00000489206 IL16Q14005 1332 aa25.21■■□□□ 1.63
SYNGR1-207ENST00000489206 MAPK8IP3Q9UPT6 1336 aa25.21■■□□□ 1.63
SYNGR1-207ENST00000489206 PMFBP1Q8TBY8 1022 aa25.2■■□□□ 1.63
SYNGR1-207ENST00000489206 FRAT1Q92837 279 aaPredicted RBP25.2■■□□□ 1.63
SYNGR1-207ENST00000489206 IGHDP01880 384 aa25.19■■□□□ 1.62
SYNGR1-207ENST00000489206 U2SURPO15042 1029 aaKnown RBP25.18■■□□□ 1.62
SYNGR1-207ENST00000489206 TMPOP42166 694 aaKnown RBP25.18■■□□□ 1.62
SYNGR1-207ENST00000489206 NBR1Q14596 966 aa25.18■■□□□ 1.62
SYNGR1-207ENST00000489206 ZMYM3Q14202 1370 aa25.17■■□□□ 1.62
SYNGR1-207ENST00000489206 DIAPH1O60610 1272 aaKnown RBP25.17■■□□□ 1.62
SYNGR1-207ENST00000489206 RGS3P49796 1198 aa25.17■■□□□ 1.62
SYNGR1-207ENST00000489206 RTL5Q5HYW3 569 aaPredicted RBP25.16■■□□□ 1.62
SYNGR1-207ENST00000489206 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.16■■□□□ 1.62
SYNGR1-207ENST00000489206 CABP1Q9NZU7 370 aa25.16■■□□□ 1.62
SYNGR1-207ENST00000489206 SENP3Q9H4L4 574 aaPredicted RBP25.16■■□□□ 1.62
SYNGR1-207ENST00000489206 MAP2P11137 1827 aaKnown RBP25.15■■□□□ 1.62
SYNGR1-207ENST00000489206 KDM4FA0A1W2PPD8 638 aa25.15■■□□□ 1.62
SYNGR1-207ENST00000489206 PPM1GO15355 546 aaPredicted RBP25.13■■□□□ 1.61
SYNGR1-207ENST00000489206 TRIM35Q9UPQ4 493 aa25.13■■□□□ 1.61
SYNGR1-207ENST00000489206 LRRC7Q96NW7 1537 aa25.12■■□□□ 1.61
SYNGR1-207ENST00000489206 MON2Q7Z3U7 1717 aa25.12■■□□□ 1.61
SYNGR1-207ENST00000489206 ZKSCAN2Q63HK3 967 aa25.12■■□□□ 1.61
SYNGR1-207ENST00000489206 EDC4Q6P2E9 1401 aaKnown RBP25.11■■□□□ 1.61
SYNGR1-207ENST00000489206 RLBP1P12271 317 aa25.11■■□□□ 1.61
SYNGR1-207ENST00000489206 TECPR2O15040 1411 aa25.11■■□□□ 1.61
SYNGR1-207ENST00000489206 CPSF1Q10570 1443 aaKnown RBP25.11■■□□□ 1.61
SYNGR1-207ENST00000489206 FAM135BQ49AJ0 1406 aa25.11■■□□□ 1.61
SYNGR1-207ENST00000489206 CPS1P31327 1500 aa25.11■■□□□ 1.61
SYNGR1-207ENST00000489206 USP35Q9P2H5 1018 aa25.11■■□□□ 1.61
SYNGR1-207ENST00000489206 FCHSD2O94868 740 aa25.1■■□□□ 1.61
SYNGR1-207ENST00000489206 SIRT1Q96EB6 747 aa25.1■■□□□ 1.61
SYNGR1-207ENST00000489206 AKAP12Q02952 1782 aa25.1■■□□□ 1.61
SYNGR1-207ENST00000489206 MVPQ14764 893 aaKnown RBP25.09■■□□□ 1.61
SYNGR1-207ENST00000489206 ITSN1Q15811 1721 aa25.08■■□□□ 1.61
SYNGR1-207ENST00000489206 DEKP35659 375 aaKnown RBP25.08■■□□□ 1.61
SYNGR1-207ENST00000489206 WAPLQ7Z5K2 1190 aa25.08■■□□□ 1.61
SYNGR1-207ENST00000489206 BCL2L13Q9BXK5 485 aa25.08■■□□□ 1.61
SYNGR1-207ENST00000489206 HDGFP51858 240 aaKnown RBP25.07■■□□□ 1.6
SYNGR1-207ENST00000489206 DZIP1LQ8IYY4 767 aaKnown RBP25.07■■□□□ 1.6
SYNGR1-207ENST00000489206 RWDD1Q9H446 243 aaPredicted RBP25.07■■□□□ 1.6
SYNGR1-207ENST00000489206 PPIP5K1Q6PFW1 1433 aa25.06■■□□□ 1.6
SYNGR1-207ENST00000489206 WASLO00401 505 aaPredicted RBP25.06■■□□□ 1.6
SYNGR1-207ENST00000489206 RIPK4P57078 832 aa25.06■■□□□ 1.6
SYNGR1-207ENST00000489206 EXOSC9Q06265 439 aaKnown RBP25.06■■□□□ 1.6
SYNGR1-207ENST00000489206 MLECQ14165 292 aa25.06■■□□□ 1.6
SYNGR1-207ENST00000489206 TSR2Q969E8 191 aaKnown RBP25.06■■□□□ 1.6
SYNGR1-207ENST00000489206 CDK12Q9NYV4 1490 aaPredicted RBP25.06■■□□□ 1.6
SYNGR1-207ENST00000489206 PCDHB15Q9Y5E8 787 aa25.05■■□□□ 1.6
SYNGR1-207ENST00000489206 UBR1Q8IWV7 1749 aa25.05■■□□□ 1.6
SYNGR1-207ENST00000489206 FTSJ3Q8IY81 847 aaKnown RBP25.05■■□□□ 1.6
SYNGR1-207ENST00000489206 TNNQ9UQP3 1299 aa25.05■■□□□ 1.6
SYNGR1-207ENST00000489206 ESF1Q9H501 851 aaKnown RBP25.04■■□□□ 1.6
SYNGR1-207ENST00000489206 SMC4Q9NTJ3 1288 aa25.04■■□□□ 1.6
SYNGR1-207ENST00000489206 POLKQ9UBT6 870 aa25.04■■□□□ 1.6
SYNGR1-207ENST00000489206 NEFMP07197 916 aa25.04■■□□□ 1.6
SYNGR1-207ENST00000489206 DAXXQ9UER7 740 aaPredicted RBP25.04■■□□□ 1.6
SYNGR1-207ENST00000489206 AATKQ6ZMQ8 1374 aa25.03■■□□□ 1.6
SYNGR1-207ENST00000489206 METP08581 1390 aa25.03■■□□□ 1.6
SYNGR1-207ENST00000489206 C3P01024 1663 aa25.03■■□□□ 1.6
SYNGR1-207ENST00000489206 RSPH6AQ9H0K4 717 aa25.02■■□□□ 1.6
SYNGR1-207ENST00000489206 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.02■■□□□ 1.6
SYNGR1-207ENST00000489206 TNRQ92752 1358 aa25■■□□□ 1.59
SYNGR1-207ENST00000489206 KIF16BQ96L93 1317 aa25■■□□□ 1.59
SYNGR1-207ENST00000489206 ZNF428Q96B54 188 aa25■■□□□ 1.59
SYNGR1-207ENST00000489206 LAS1LQ9Y4W2 734 aaKnown RBP25■■□□□ 1.59
SYNGR1-207ENST00000489206 SSH1Q8WYL5 1049 aa25■■□□□ 1.59
SYNGR1-207ENST00000489206 DDX19BQ9UMR2 479 aa25■■□□□ 1.59
SYNGR1-207ENST00000489206 ADAMTSL3P82987 1691 aa24.99■■□□□ 1.59
SYNGR1-207ENST00000489206 ALDH1L2Q3SY69 923 aa24.99■■□□□ 1.59
SYNGR1-207ENST00000489206 ATF7IPQ6VMQ6 1270 aa24.99■■□□□ 1.59
SYNGR1-207ENST00000489206 CALD1Q05682 793 aaKnown RBP24.98■■□□□ 1.59
SYNGR1-207ENST00000489206 TRIM27P14373 513 aa24.97■■□□□ 1.59
SYNGR1-207ENST00000489206 PRKAR2BP31323 418 aa24.97■■□□□ 1.59
SYNGR1-207ENST00000489206 PDZRN3Q9UPQ7 1066 aa24.97■■□□□ 1.59
SYNGR1-207ENST00000489206 IPO8O15397 1037 aaKnown RBP24.96■■□□□ 1.59
SYNGR1-207ENST00000489206 NUDT16Q96DE0 195 aaKnown RBP24.96■■□□□ 1.59
SYNGR1-207ENST00000489206 NFE2L2Q16236 605 aa24.95■■□□□ 1.58
SYNGR1-207ENST00000489206 CCDC61Q9Y6R9 512 aa24.95■■□□□ 1.58
SYNGR1-207ENST00000489206 TMEM2Q9UHN6 1383 aa24.95■■□□□ 1.58
SYNGR1-207ENST00000489206 TOPAZ1Q8N9V7 1692 aa24.95■■□□□ 1.58
SYNGR1-207ENST00000489206 DLG5Q8TDM6 1919 aa24.95■■□□□ 1.58
SYNGR1-207ENST00000489206 BRPF1P55201 1214 aaPredicted RBP24.94■■□□□ 1.58
SYNGR1-207ENST00000489206 HDAC1Q13547 482 aaPredicted RBP24.94■■□□□ 1.58
SYNGR1-207ENST00000489206 NRKQ7Z2Y5 1582 aa24.94■■□□□ 1.58
SYNGR1-207ENST00000489206 USP19O94966 1318 aa24.94■■□□□ 1.58
SYNGR1-207ENST00000489206 TXNDC2Q86VQ3 553 aa24.93■■□□□ 1.58
SYNGR1-207ENST00000489206 RIMS1Q86UR5 1692 aaKnown RBP24.93■■□□□ 1.58
SYNGR1-207ENST00000489206 IL13P35225 146 aa24.93■■□□□ 1.58
SYNGR1-207ENST00000489206 ZNF692Q9BU19 519 aaPredicted RBP24.93■■□□□ 1.58
SYNGR1-207ENST00000489206 FER1L4A9Z1Z3 1794 aa24.92■■□□□ 1.58
SYNGR1-207ENST00000489206 COG3Q96JB2 828 aa24.91■■□□□ 1.58
SYNGR1-207ENST00000489206 NOB1Q9ULX3 412 aaKnown RBP24.91■■□□□ 1.58
SYNGR1-207ENST00000489206 NME9Q86XW9 330 aa24.91■■□□□ 1.58
SYNGR1-207ENST00000489206 PLPPR3Q6T4P5 718 aa24.89■■□□□ 1.58
SYNGR1-207ENST00000489206 ITPRIPQ8IWB1 547 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms