RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 KCNH2Q12809 1159 aa7.58□□□□□ -1.2
KDM3A-213ENST00000488971 BAP1Q92560 729 aa7.58□□□□□ -1.2
KDM3A-213ENST00000488971 TERTO14746 1132 aaKnown RBP7.57□□□□□ -1.2
KDM3A-213ENST00000488971 CAPN5O15484 640 aaPredicted RBP7.57□□□□□ -1.2
KDM3A-213ENST00000488971 PDE4DQ08499 809 aa7.57□□□□□ -1.2
KDM3A-213ENST00000488971 CTHP32929 405 aa7.56□□□□□ -1.2
KDM3A-213ENST00000488971 DIXDC1Q155Q3 683 aa7.56□□□□□ -1.2
KDM3A-213ENST00000488971 IL27Q8NEV9 243 aa7.56□□□□□ -1.2
KDM3A-213ENST00000488971 TBC1D2Q9BYX2 928 aa7.56□□□□□ -1.2
KDM3A-213ENST00000488971 BMP1P13497 986 aa7.55□□□□□ -1.2
KDM3A-213ENST00000488971 INSM1Q01101 510 aaPredicted RBP7.55□□□□□ -1.2
KDM3A-213ENST00000488971 DESI1Q6ICB0 168 aa7.55□□□□□ -1.2
KDM3A-213ENST00000488971 PLEKHG3A1L390 1219 aa7.54□□□□□ -1.2
KDM3A-213ENST00000488971 RSBN1LQ6PCB5 846 aaPredicted RBP7.54□□□□□ -1.2
KDM3A-213ENST00000488971 ZNF511Q8NB15 262 aa7.54□□□□□ -1.2
KDM3A-213ENST00000488971 TLL2Q9Y6L7 1015 aa7.54□□□□□ -1.2
KDM3A-213ENST00000488971 VARSP26640 1264 aaKnown RBP7.53□□□□□ -1.2
KDM3A-213ENST00000488971 GJA5P36382 358 aa7.53□□□□□ -1.2
KDM3A-213ENST00000488971 PARP9Q8IXQ6 854 aa7.53□□□□□ -1.2
KDM3A-213ENST00000488971 SLC16A10Q8TF71 515 aa7.53□□□□□ -1.2
KDM3A-213ENST00000488971 WIPF1O43516 503 aa7.52□□□□□ -1.21
KDM3A-213ENST00000488971 TRIM46Q7Z4K8 759 aa7.52□□□□□ -1.21
KDM3A-213ENST00000488971 PCDHB15Q9Y5E8 787 aa7.52□□□□□ -1.21
KDM3A-213ENST00000488971 SPTLC1O15269 473 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 NNTQ13423 1086 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 CSPP1Q1MSJ5 1256 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 LYPD8Q6UX82 237 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 ZMYND15Q9H091 742 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 ZBTB3Q9H5J0 574 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 STK17AQ9UEE5 414 aa7.51□□□□□ -1.21
KDM3A-213ENST00000488971 CFAP99D6REC4 459 aa7.5□□□□□ -1.21
KDM3A-213ENST00000488971 RIC3Q7Z5B4 369 aa7.5□□□□□ -1.21
KDM3A-213ENST00000488971 FAM174AQ8TBP5 190 aa7.5□□□□□ -1.21
KDM3A-213ENST00000488971 NXF1Q9UBU9 619 aaKnown RBP7.5□□□□□ -1.21
KDM3A-213ENST00000488971 HRCP23327 699 aa7.49□□□□□ -1.21
KDM3A-213ENST00000488971 ARID5BQ14865 1188 aa7.49□□□□□ -1.21
KDM3A-213ENST00000488971 AGERQ15109 404 aa7.49□□□□□ -1.21
KDM3A-213ENST00000488971 TSC1Q92574 1164 aa7.49□□□□□ -1.21
KDM3A-213ENST00000488971 WDR4P57081 412 aaKnown RBP7.48□□□□□ -1.21
KDM3A-213ENST00000488971 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 MPNDQ8N594 471 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 CABLES1Q8TDN4 633 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 DDRGK1Q96HY6 314 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 ZFP42Q96MM3 310 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 FAM117AQ9C073 453 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 RSPH6AQ9H0K4 717 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 MAP10Q9P2G4 905 aa7.48□□□□□ -1.21
KDM3A-213ENST00000488971 NUTM2BA6NNL0 878 aaPredicted RBP7.47□□□□□ -1.21
KDM3A-213ENST00000488971 NUTM2EB1AL46 878 aaPredicted RBP7.47□□□□□ -1.21
KDM3A-213ENST00000488971 VEGFBP49765 207 aa7.47□□□□□ -1.21
KDM3A-213ENST00000488971 SCARF1Q14162 830 aa7.47□□□□□ -1.21
KDM3A-213ENST00000488971 NUTM2DQ5VT03 806 aaPredicted RBP7.47□□□□□ -1.21
KDM3A-213ENST00000488971 PRPF38BQ5VTL8 546 aaKnown RBP7.47□□□□□ -1.21
KDM3A-213ENST00000488971 NUTM2AQ8IVF1 878 aaPredicted RBP7.47□□□□□ -1.21
KDM3A-213ENST00000488971 ADH1CP00326 375 aa7.46□□□□□ -1.22
KDM3A-213ENST00000488971 MRPL14Q6P1L8 145 aaKnown RBP7.46□□□□□ -1.22
KDM3A-213ENST00000488971 FOXJ1Q92949 421 aa7.46□□□□□ -1.22
KDM3A-213ENST00000488971 F12P00748 615 aaPredicted RBP7.45□□□□□ -1.22
KDM3A-213ENST00000488971 TIMP2P16035 220 aa7.45□□□□□ -1.22
KDM3A-213ENST00000488971 IRF7Q92985 503 aa7.45□□□□□ -1.22
KDM3A-213ENST00000488971 PURBQ96QR8 312 aaKnown RBP7.45□□□□□ -1.22
KDM3A-213ENST00000488971 BPHLQ86WA6 291 aaPredicted RBP7.44□□□□□ -1.22
KDM3A-213ENST00000488971 NPAS3Q8IXF0 933 aa7.44□□□□□ -1.22
KDM3A-213ENST00000488971 PER1O15534 1290 aaPredicted RBP7.43□□□□□ -1.22
KDM3A-213ENST00000488971 GMPRP36959 345 aa7.43□□□□□ -1.22
KDM3A-213ENST00000488971 ARMC2Q8NEN0 867 aa7.43□□□□□ -1.22
KDM3A-213ENST00000488971 GOPCQ9HD26 462 aa7.43□□□□□ -1.22
KDM3A-213ENST00000488971 LIMD1Q9UGP4 676 aa7.43□□□□□ -1.22
KDM3A-213ENST00000488971 FAM181BA6NEQ2 426 aa7.42□□□□□ -1.22
KDM3A-213ENST00000488971 H3BM21 787 aa7.42□□□□□ -1.22
KDM3A-213ENST00000488971 ZIC2O95409 532 aaPredicted RBP7.42□□□□□ -1.22
KDM3A-213ENST00000488971 MYSM1Q5VVJ2 828 aa7.42□□□□□ -1.22
KDM3A-213ENST00000488971 CDK15Q96Q40 435 aa7.42□□□□□ -1.22
KDM3A-213ENST00000488971 NR5A1Q13285 461 aa7.41□□□□□ -1.22
KDM3A-213ENST00000488971 QPCTQ16769 361 aa7.41□□□□□ -1.22
KDM3A-213ENST00000488971 HELBQ8NG08 1087 aaPredicted RBP7.41□□□□□ -1.22
KDM3A-213ENST00000488971 SOBPA7XYQ1 873 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 LILRB3O75022 631 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 C4orf48Q5BLP8 95 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 C6orf118Q5T5N4 469 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 ITPKCQ96DU7 683 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 KLF16Q9BXK1 252 aaPredicted RBP7.4□□□□□ -1.22
KDM3A-213ENST00000488971 ZFAND3Q9H8U3 227 aa7.4□□□□□ -1.22
KDM3A-213ENST00000488971 UPP2O95045 317 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 NR3C2P08235 984 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 UBTFP17480 764 aaKnown RBP7.39□□□□□ -1.23
KDM3A-213ENST00000488971 FLIIQ13045 1269 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 TUSC1Q2TAM9 212 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 NBPF14Q5TI25 921 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 ZSCAN1Q8NBB4 408 aa7.39□□□□□ -1.23
KDM3A-213ENST00000488971 ERBB4Q15303 1308 aa7.38□□□□□ -1.23
KDM3A-213ENST00000488971 MAN1A2O60476 641 aa7.38□□□□□ -1.23
KDM3A-213ENST00000488971 BMP2P12643 396 aa7.38□□□□□ -1.23
KDM3A-213ENST00000488971 GRM5P41594 1212 aa7.38□□□□□ -1.23
KDM3A-213ENST00000488971 CLK2P49760 499 aaKnown RBP7.38□□□□□ -1.23
KDM3A-213ENST00000488971 RTL5Q5HYW3 569 aaPredicted RBP7.38□□□□□ -1.23
KDM3A-213ENST00000488971 MAGEB6P1A0A0J9YX57 407 aa7.37□□□□□ -1.23
KDM3A-213ENST00000488971 VASH1Q7L8A9 365 aaPredicted RBP7.37□□□□□ -1.23
KDM3A-213ENST00000488971 POLR3EQ9NVU0 708 aa7.37□□□□□ -1.23
KDM3A-213ENST00000488971 FSHRP23945 695 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms