RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 BRD4O60885 1362 aaPredicted RBP21.1■□□□□ 0.97
CXCL12-207ENST00000488591 TMC1Q8TDI8 760 aa21.09■□□□□ 0.97
CXCL12-207ENST00000488591 CDCA8Q53HL2 280 aa21.08■□□□□ 0.97
CXCL12-207ENST00000488591 ALS2Q96Q42 1657 aa21.08■□□□□ 0.96
CXCL12-207ENST00000488591 EIF4G2P78344 907 aaKnown RBP eCLIP21.07■□□□□ 0.96
CXCL12-207ENST00000488591 ABTB2Q8N961 1025 aa21.07■□□□□ 0.96
CXCL12-207ENST00000488591 CABLES1Q8TDN4 633 aa21.07■□□□□ 0.96
CXCL12-207ENST00000488591 AFF2P51816 1311 aa21.06■□□□□ 0.96
CXCL12-207ENST00000488591 USP6P35125 1406 aa21.05■□□□□ 0.96
CXCL12-207ENST00000488591 HDGFL2Q7Z4V5 671 aaPredicted RBP21.04■□□□□ 0.96
CXCL12-207ENST00000488591 MARF1Q9Y4F3 1742 aaKnown RBP21.04■□□□□ 0.96
CXCL12-207ENST00000488591 NUTM2GQ5VZR2 741 aa21.03■□□□□ 0.96
CXCL12-207ENST00000488591 ILDR2Q71H61 639 aa21.03■□□□□ 0.96
CXCL12-207ENST00000488591 SLC12A5Q9H2X9 1139 aa21.03■□□□□ 0.96
CXCL12-207ENST00000488591 TERF2IPQ9NYB0 399 aa21.03■□□□□ 0.96
CXCL12-207ENST00000488591 KTN1Q86UP2 1357 aaKnown RBP21.02■□□□□ 0.96
CXCL12-207ENST00000488591 NINLQ9Y2I6 1382 aa21.02■□□□□ 0.96
CXCL12-207ENST00000488591 POTEAQ6S8J7 498 aa21.02■□□□□ 0.96
CXCL12-207ENST00000488591 NLRP13Q86W25 1043 aa21.02■□□□□ 0.96
CXCL12-207ENST00000488591 CPSF1Q10570 1443 aaKnown RBP21.02■□□□□ 0.96
CXCL12-207ENST00000488591 AKAP12Q02952 1782 aa21.01■□□□□ 0.95
CXCL12-207ENST00000488591 USP21Q9UK80 565 aa21.01■□□□□ 0.95
CXCL12-207ENST00000488591 HSPA5P11021 654 aaKnown RBP21■□□□□ 0.95
CXCL12-207ENST00000488591 FNBP4Q8N3X1 1017 aaPredicted RBP21■□□□□ 0.95
CXCL12-207ENST00000488591 ABCA3Q99758 1704 aa21■□□□□ 0.95
CXCL12-207ENST00000488591 TTC21BQ7Z4L5 1316 aa20.99■□□□□ 0.95
CXCL12-207ENST00000488591 TTC21AQ8NDW8 1320 aa20.99■□□□□ 0.95
CXCL12-207ENST00000488591 NLRP6P59044 892 aa20.98■□□□□ 0.95
CXCL12-207ENST00000488591 QTRT2Q9H974 415 aaKnown RBP20.98■□□□□ 0.95
CXCL12-207ENST00000488591 SSH2Q76I76 1423 aa20.97■□□□□ 0.95
CXCL12-207ENST00000488591 CD163L1Q9NR16 1453 aa20.95■□□□□ 0.94
CXCL12-207ENST00000488591 RXRBP28702 533 aa20.95■□□□□ 0.94
CXCL12-207ENST00000488591 TRPC5Q9UL62 973 aaPredicted RBP20.95■□□□□ 0.94
CXCL12-207ENST00000488591 MON2Q7Z3U7 1717 aa20.95■□□□□ 0.94
CXCL12-207ENST00000488591 FAM83GA6ND36 823 aa20.94■□□□□ 0.94
CXCL12-207ENST00000488591 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.94■□□□□ 0.94
CXCL12-207ENST00000488591 PRDM11Q9NQV5 511 aa20.94■□□□□ 0.94
CXCL12-207ENST00000488591 CRYBG1Q9Y4K1 1723 aa20.94■□□□□ 0.94
CXCL12-207ENST00000488591 USP19O94966 1318 aa20.94■□□□□ 0.94
CXCL12-207ENST00000488591 A0A1W2PP64 1363 aa20.94■□□□□ 0.94
CXCL12-207ENST00000488591 UNC5CLQ8IV45 518 aa20.93■□□□□ 0.94
CXCL12-207ENST00000488591 EDC4Q6P2E9 1401 aaKnown RBP20.93■□□□□ 0.94
CXCL12-207ENST00000488591 PHRF1Q9P1Y6 1649 aaKnown RBP20.93■□□□□ 0.94
CXCL12-207ENST00000488591 ZC3H6P61129 1189 aaKnown RBP20.92■□□□□ 0.94
CXCL12-207ENST00000488591 BCL9LQ86UU0 1499 aa20.92■□□□□ 0.94
CXCL12-207ENST00000488591 SLIT2O94813 1529 aa20.92■□□□□ 0.94
CXCL12-207ENST00000488591 NRKQ7Z2Y5 1582 aa20.92■□□□□ 0.94
CXCL12-207ENST00000488591 PIK3C2AO00443 1686 aa20.91■□□□□ 0.94
CXCL12-207ENST00000488591 GCP02774 474 aa20.91■□□□□ 0.94
CXCL12-207ENST00000488591 RBM6P78332 1123 aaKnown RBP20.91■□□□□ 0.94
CXCL12-207ENST00000488591 ANKRD36BQ8N2N9 1353 aa20.91■□□□□ 0.94
CXCL12-207ENST00000488591 POLR3GLQ9BT43 218 aa20.91■□□□□ 0.94
CXCL12-207ENST00000488591 COL14A1Q05707 1796 aaKnown RBP20.9■□□□□ 0.94
CXCL12-207ENST00000488591 KIAA0232Q92628 1395 aa20.9■□□□□ 0.94
CXCL12-207ENST00000488591 KCNH5Q8NCM2 988 aa20.89■□□□□ 0.93
CXCL12-207ENST00000488591 BTG4Q9NY30 223 aa20.89■□□□□ 0.93
CXCL12-207ENST00000488591 NWD2Q9ULI1 1742 aa20.89■□□□□ 0.93
CXCL12-207ENST00000488591 PLCH1Q4KWH8 1693 aa20.89■□□□□ 0.93
CXCL12-207ENST00000488591 ATRNO75882 1429 aa20.88■□□□□ 0.93
CXCL12-207ENST00000488591 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.87■□□□□ 0.93
CXCL12-207ENST00000488591 NME9Q86XW9 330 aa20.87■□□□□ 0.93
CXCL12-207ENST00000488591 CPDO75976 1380 aa20.86■□□□□ 0.93
CXCL12-207ENST00000488591 CHRNA2Q15822 529 aa20.86■□□□□ 0.93
CXCL12-207ENST00000488591 SLIT3O75094 1523 aa20.86■□□□□ 0.93
CXCL12-207ENST00000488591 USP31Q70CQ4 1352 aa20.85■□□□□ 0.93
CXCL12-207ENST00000488591 GJD4Q96KN9 370 aaPredicted RBP20.85■□□□□ 0.93
CXCL12-207ENST00000488591 CCDC9Q9Y3X0 531 aaKnown RBP20.85■□□□□ 0.93
CXCL12-207ENST00000488591 ZBTB7CA1YPR0 619 aa20.84■□□□□ 0.93
CXCL12-207ENST00000488591 SOCS7O14512 581 aa20.84■□□□□ 0.93
CXCL12-207ENST00000488591 VPS72Q15906 364 aa20.84■□□□□ 0.93
CXCL12-207ENST00000488591 CDK12Q9NYV4 1490 aaPredicted RBP20.83■□□□□ 0.93
CXCL12-207ENST00000488591 SOX12O15370 315 aa20.83■□□□□ 0.93
CXCL12-207ENST00000488591 ZRANB1Q9UGI0 708 aa20.83■□□□□ 0.93
CXCL12-207ENST00000488591 EVA1CP58658 441 aa20.82■□□□□ 0.92
CXCL12-207ENST00000488591 MYOM1P52179 1685 aa20.82■□□□□ 0.92
CXCL12-207ENST00000488591 COG3Q96JB2 828 aa20.81■□□□□ 0.92
CXCL12-207ENST00000488591 USP54Q70EL1 1684 aa20.8■□□□□ 0.92
CXCL12-207ENST00000488591 NRAPQ86VF7 1730 aa20.79■□□□□ 0.92
CXCL12-207ENST00000488591 STRN4Q9NRL3 753 aa20.79■□□□□ 0.92
CXCL12-207ENST00000488591 AATKQ6ZMQ8 1374 aa20.78■□□□□ 0.92
CXCL12-207ENST00000488591 C11orf95C9JLR9 678 aaPredicted RBP20.78■□□□□ 0.92
CXCL12-207ENST00000488591 ARHGEF25Q86VW2 580 aa20.78■□□□□ 0.92
CXCL12-207ENST00000488591 CARD14Q9BXL6 1004 aa20.78■□□□□ 0.92
CXCL12-207ENST00000488591 FYB1O15117 783 aa20.77■□□□□ 0.92
CXCL12-207ENST00000488591 OVOS2A0A0J9YW53 1432 aa20.76■□□□□ 0.91
CXCL12-207ENST00000488591 RGS12O14924 1447 aa20.76■□□□□ 0.91
CXCL12-207ENST00000488591 OVOS2Q6IE36 1432 aa20.76■□□□□ 0.91
CXCL12-207ENST00000488591 NSD3Q9BZ95 1437 aa20.76■□□□□ 0.91
CXCL12-207ENST00000488591 CAMTA1Q9Y6Y1 1673 aa20.76■□□□□ 0.91
CXCL12-207ENST00000488591 NFAT5O94916 1531 aa20.75■□□□□ 0.91
CXCL12-207ENST00000488591 LMO7Q8WWI1 1683 aa20.75■□□□□ 0.91
CXCL12-207ENST00000488591 GGNBP2Q9H3C7 697 aa20.75■□□□□ 0.91
CXCL12-207ENST00000488591 PANK3Q9H999 370 aa20.75■□□□□ 0.91
CXCL12-207ENST00000488591 GLI3P10071 1580 aa20.75■□□□□ 0.91
CXCL12-207ENST00000488591 KIF7Q2M1P5 1343 aa20.75■□□□□ 0.91
CXCL12-207ENST00000488591 SPATA31A5Q5VU36 1347 aa20.75■□□□□ 0.91
CXCL12-207ENST00000488591 SPATA31A7Q8IWB4 1347 aa20.75■□□□□ 0.91
CXCL12-207ENST00000488591 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
CXCL12-207ENST00000488591 CGNL1Q0VF96 1302 aa20.74■□□□□ 0.91
CXCL12-207ENST00000488591 KIF20BQ96Q89 1820 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms