RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 CABP1Q9NZU7 370 aa3.38□□□□□ -1.87
C9orf72-205ENST00000488117 LAS1LQ9Y4W2 734 aaKnown RBP3.38□□□□□ -1.87
C9orf72-205ENST00000488117 ZNF521Q96K83 1311 aa3.38□□□□□ -1.87
C9orf72-205ENST00000488117 DLC1Q96QB1 1528 aa3.38□□□□□ -1.87
C9orf72-205ENST00000488117 TMEM131LA2VDJ0 1609 aa3.38□□□□□ -1.87
C9orf72-205ENST00000488117 RIPK4P57078 832 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 ZNF692Q9BU19 519 aaPredicted RBP3.37□□□□□ -1.87
C9orf72-205ENST00000488117 KIF16BQ96L93 1317 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 MED14O60244 1454 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 ATP7BP35670 1465 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 ARHGEF40Q8TER5 1519 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 TSPOAP1O95153 1857 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 NBR1Q14596 966 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 IL16Q14005 1332 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 WASLO00401 505 aaPredicted RBP3.37□□□□□ -1.87
C9orf72-205ENST00000488117 BCAR3O75815 825 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 FCHSD2O94868 740 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 ITPRIPQ8IWB1 547 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 DZIP1LQ8IYY4 767 aaKnown RBP3.37□□□□□ -1.87
C9orf72-205ENST00000488117 TRMT2AQ8IZ69 625 aaKnown RBP3.37□□□□□ -1.87
C9orf72-205ENST00000488117 BACH2Q9BYV9 841 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 SIGLEC1Q9BZZ2 1709 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 DDX19BQ9UMR2 479 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 COG6Q9Y2V7 657 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 PPIP5K1Q6PFW1 1433 aa3.37□□□□□ -1.87
C9orf72-205ENST00000488117 SPATA31D1Q6ZQQ2 1576 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 ZMYM3Q14202 1370 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 GNAI1P63096 354 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 SIRT1Q96EB6 747 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 A2ML1A8K2U0 1454 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 PTPRMP28827 1452 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 EDC4Q6P2E9 1401 aaKnown RBP3.36□□□□□ -1.87
C9orf72-205ENST00000488117 TMPOP42166 694 aaKnown RBP3.36□□□□□ -1.87
C9orf72-205ENST00000488117 RARSP54136 660 aaKnown RBP3.36□□□□□ -1.87
C9orf72-205ENST00000488117 C20orf194Q5TEA3 1177 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 TXNDC2Q86VQ3 553 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 ZNF428Q96B54 188 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 CFAP65Q6ZU64 1925 aaKnown RBP3.36□□□□□ -1.87
C9orf72-205ENST00000488117 FYB1O15117 783 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 PANK1Q8TE04 598 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 NUDT16Q96DE0 195 aaKnown RBP3.36□□□□□ -1.87
C9orf72-205ENST00000488117 CFAP44Q96MT7 982 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 IQSEC2Q5JU85 1478 aa3.36□□□□□ -1.87
C9orf72-205ENST00000488117 FAM135BQ49AJ0 1406 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 PRKAR2BP31323 418 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 MVPQ14764 893 aaKnown RBP3.35□□□□□ -1.87
C9orf72-205ENST00000488117 WAPLQ7Z5K2 1190 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 CCDC61Q9Y6R9 512 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 KDM2BQ8NHM5 1336 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 KIF20BQ96Q89 1820 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 EXOSC9Q06265 439 aaKnown RBP3.35□□□□□ -1.87
C9orf72-205ENST00000488117 NFE2L2Q16236 605 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 ALDH1L2Q3SY69 923 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 RTF1Q92541 710 aaKnown RBP3.35□□□□□ -1.87
C9orf72-205ENST00000488117 BCL2L13Q9BXK5 485 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 NLRP1Q9C000 1473 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 THEMISQ8N1K5 641 aaPredicted RBP3.35□□□□□ -1.87
C9orf72-205ENST00000488117 USP35Q9P2H5 1018 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 ANKRD26Q9UPS8 1709 aa3.35□□□□□ -1.87
C9orf72-205ENST00000488117 NGDNQ8NEJ9 315 aaKnown RBP3.35□□□□□ -1.87
C9orf72-205ENST00000488117 API5Q9BZZ5 524 aaKnown RBP3.35□□□□□ -1.87
C9orf72-205ENST00000488117 SHPRHQ149N8 1683 aa3.34□□□□□ -1.87
C9orf72-205ENST00000488117 TRHP20396 242 aaPredicted RBP3.34□□□□□ -1.87
C9orf72-205ENST00000488117 TSR2Q969E8 191 aaKnown RBP3.34□□□□□ -1.87
C9orf72-205ENST00000488117 IFT57Q9NWB7 429 aa3.34□□□□□ -1.87
C9orf72-205ENST00000488117 TMEM2Q9UHN6 1383 aa3.34□□□□□ -1.87
C9orf72-205ENST00000488117 HMOX1P09601 288 aa3.34□□□□□ -1.87
C9orf72-205ENST00000488117 C14orf37Q86TY3 774 aa3.34□□□□□ -1.87
C9orf72-205ENST00000488117 SPINK5Q9NQ38 1064 aaPredicted RBP3.34□□□□□ -1.87
C9orf72-205ENST00000488117 PLEKHG1Q9ULL1 1385 aa3.34□□□□□ -1.87
C9orf72-205ENST00000488117 CASC1Q6TDU7 716 aa3.34□□□□□ -1.88
C9orf72-205ENST00000488117 ATF7IPQ6VMQ6 1270 aa3.34□□□□□ -1.88
C9orf72-205ENST00000488117 NOB1Q9ULX3 412 aaKnown RBP3.34□□□□□ -1.88
C9orf72-205ENST00000488117 CDK12Q9NYV4 1490 aaPredicted RBP3.33□□□□□ -1.88
C9orf72-205ENST00000488117 AATKQ6ZMQ8 1374 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 AMPHP49418 695 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 NME9Q86XW9 330 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 TTC21BQ7Z4L5 1316 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 TTC21AQ8NDW8 1320 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 CDC42BPGQ6DT37 1551 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 CHMP4AQ9BY43 222 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 ADGRB2O60241 1585 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 MYO5BQ9ULV0 1848 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 PLEKHF1Q96S99 279 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 POLKQ9UBT6 870 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 PDZRN3Q9UPQ7 1066 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 CPS1P31327 1500 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 RSPH6AQ9H0K4 717 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 KNDC1Q76NI1 1749 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 METP08581 1390 aa3.33□□□□□ -1.88
C9orf72-205ENST00000488117 DEKP35659 375 aaKnown RBP3.32□□□□□ -1.88
C9orf72-205ENST00000488117 ITSN1Q15811 1721 aa3.32□□□□□ -1.88
C9orf72-205ENST00000488117 TWISTNBQ3B726 338 aaPredicted RBP3.32□□□□□ -1.88
C9orf72-205ENST00000488117 HSCBQ8IWL3 235 aa3.32□□□□□ -1.88
C9orf72-205ENST00000488117 GCC1Q96CN9 775 aa3.32□□□□□ -1.88
C9orf72-205ENST00000488117 DMRT2Q9Y5R5 561 aa3.32□□□□□ -1.88
C9orf72-205ENST00000488117 EMILIN1Q9Y6C2 1016 aa3.32□□□□□ -1.88
C9orf72-205ENST00000488117 SOX12O15370 315 aa3.32□□□□□ -1.88
C9orf72-205ENST00000488117 GAS2L2Q8NHY3 880 aa3.32□□□□□ -1.88
C9orf72-205ENST00000488117 SSH1Q8WYL5 1049 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms