RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-218ENST00000487565 EIF2AK4Q9P2K8 1649 aaKnown RBP11.4□□□□□ -0.58
GARNL3-218ENST00000487565 CERKQ8TCT0 537 aa11.4□□□□□ -0.58
GARNL3-218ENST00000487565 CDHR5Q9HBB8 845 aa11.4□□□□□ -0.58
GARNL3-218ENST00000487565 REREQ9P2R6 1566 aa11.4□□□□□ -0.58
GARNL3-218ENST00000487565 RAB3GAP2Q9H2M9 1393 aa11.4□□□□□ -0.59
GARNL3-218ENST00000487565 SEMA3EO15041 775 aa11.39□□□□□ -0.59
GARNL3-218ENST00000487565 HCSTQ9UBK5 93 aa11.39□□□□□ -0.59
GARNL3-218ENST00000487565 WNT2BQ93097 391 aa11.38□□□□□ -0.59
GARNL3-218ENST00000487565 ATP10AO60312 1499 aa11.38□□□□□ -0.59
GARNL3-218ENST00000487565 CDCA7LQ96GN5 454 aa11.37□□□□□ -0.59
GARNL3-218ENST00000487565 DHX29Q7Z478 1369 aaKnown RBP11.37□□□□□ -0.59
GARNL3-218ENST00000487565 PRSS12P56730 875 aa11.36□□□□□ -0.59
GARNL3-218ENST00000487565 PACS2Q86VP3 889 aa11.36□□□□□ -0.59
GARNL3-218ENST00000487565 SEPT9Q9UHD8 586 aaPredicted RBP11.36□□□□□ -0.59
GARNL3-218ENST00000487565 TSKSQ9UJT2 592 aa11.36□□□□□ -0.59
GARNL3-218ENST00000487565 UNC13BO14795 1591 aa11.36□□□□□ -0.59
GARNL3-218ENST00000487565 RNF17Q9BXT8 1623 aaKnown RBP11.35□□□□□ -0.59
GARNL3-218ENST00000487565 LAPTM4BQ86VI4 370 aa11.35□□□□□ -0.59
GARNL3-218ENST00000487565 BCORL1Q5H9F3 1711 aa11.35□□□□□ -0.59
GARNL3-218ENST00000487565 AGLP35573 1532 aa11.35□□□□□ -0.59
GARNL3-218ENST00000487565 DEPDC5O75140 1603 aa11.34□□□□□ -0.59
GARNL3-218ENST00000487565 PRDM15P57071 1507 aaPredicted RBP11.34□□□□□ -0.59
GARNL3-218ENST00000487565 PTPN5P54829 565 aa11.33□□□□□ -0.6
GARNL3-218ENST00000487565 THSD4Q6ZMP0 1018 aa11.33□□□□□ -0.6
GARNL3-218ENST00000487565 KDM5DQ9BY66 1539 aa11.33□□□□□ -0.6
GARNL3-218ENST00000487565 ACIN1Q9UKV3 1341 aaKnown RBP11.33□□□□□ -0.6
GARNL3-218ENST00000487565 ANKK1Q8NFD2 765 aa11.32□□□□□ -0.6
GARNL3-218ENST00000487565 MROH1Q8NDA8 1641 aa11.31□□□□□ -0.6
GARNL3-218ENST00000487565 FAM98CQ17RN3 349 aaKnown RBP11.31□□□□□ -0.6
GARNL3-218ENST00000487565 NPDC1Q9NQX5 325 aaPredicted RBP11.31□□□□□ -0.6
GARNL3-218ENST00000487565 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
GARNL3-218ENST00000487565 KANK1Q14678 1352 aa11.3□□□□□ -0.6
GARNL3-218ENST00000487565 SIGLEC1Q9BZZ2 1709 aa11.3□□□□□ -0.6
GARNL3-218ENST00000487565 NUTM2FA1L443 756 aa11.3□□□□□ -0.6
GARNL3-218ENST00000487565 TESPA1A2RU30 521 aaPredicted RBP11.3□□□□□ -0.6
GARNL3-218ENST00000487565 KIF3BO15066 747 aa11.3□□□□□ -0.6
GARNL3-218ENST00000487565 HRCP23327 699 aa11.3□□□□□ -0.6
GARNL3-218ENST00000487565 ZFRQ96KR1 1074 aaKnown RBP11.3□□□□□ -0.6
GARNL3-218ENST00000487565 IQGAP3Q86VI3 1631 aa11.3□□□□□ -0.6
GARNL3-218ENST00000487565 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
GARNL3-218ENST00000487565 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
GARNL3-218ENST00000487565 TRIM52Q96A61 297 aa11.29□□□□□ -0.6
GARNL3-218ENST00000487565 RBM27Q9P2N5 1060 aaKnown RBP11.29□□□□□ -0.6
GARNL3-218ENST00000487565 NUP155O75694 1391 aa11.28□□□□□ -0.6
GARNL3-218ENST00000487565 ZC3H13Q5T200 1668 aaKnown RBP11.28□□□□□ -0.6
GARNL3-218ENST00000487565 PZPP20742 1482 aa11.28□□□□□ -0.6
GARNL3-218ENST00000487565 SMAPO00193 183 aa11.28□□□□□ -0.6
GARNL3-218ENST00000487565 SMYD5Q6GMV2 418 aa11.28□□□□□ -0.6
GARNL3-218ENST00000487565 PNMA3Q9UL41 463 aa11.28□□□□□ -0.6
GARNL3-218ENST00000487565 ARID4BQ4LE39 1312 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-218ENST00000487565 VWDEQ8N2E2 1590 aa11.28□□□□□ -0.6
GARNL3-218ENST00000487565 ABCC3O15438 1527 aa11.27□□□□□ -0.61
GARNL3-218ENST00000487565 PADI6Q6TGC4 694 aa11.27□□□□□ -0.61
GARNL3-218ENST00000487565 BCAMP50895 628 aa11.26□□□□□ -0.61
GARNL3-218ENST00000487565 TATDN2Q93075 761 aa11.26□□□□□ -0.61
GARNL3-218ENST00000487565 DHX57Q6P158 1386 aaKnown RBP11.26□□□□□ -0.61
GARNL3-218ENST00000487565 EFCAB6Q5THR3 1501 aa11.25□□□□□ -0.61
GARNL3-218ENST00000487565 LMTK2Q8IWU2 1503 aa11.25□□□□□ -0.61
GARNL3-218ENST00000487565 TET3O43151 1660 aa11.25□□□□□ -0.61
GARNL3-218ENST00000487565 PTGDRQ13258 359 aa11.25□□□□□ -0.61
GARNL3-218ENST00000487565 GGT6Q6P531 493 aa11.25□□□□□ -0.61
GARNL3-218ENST00000487565 CEP152O94986 1710 aa11.24□□□□□ -0.61
GARNL3-218ENST00000487565 SOWAHBA6NEL2 793 aa11.24□□□□□ -0.61
GARNL3-218ENST00000487565 C3orf80F5H4A9 247 aa11.24□□□□□ -0.61
GARNL3-218ENST00000487565 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
GARNL3-218ENST00000487565 CAMSAP1Q5T5Y3 1602 aa11.24□□□□□ -0.61
GARNL3-218ENST00000487565 MLECQ14165 292 aa11.23□□□□□ -0.61
GARNL3-218ENST00000487565 TTC13Q8NBP0 860 aa11.23□□□□□ -0.61
GARNL3-218ENST00000487565 LRCH3Q96II8 777 aa11.23□□□□□ -0.61
GARNL3-218ENST00000487565 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.23□□□□□ -0.61
GARNL3-218ENST00000487565 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
GARNL3-218ENST00000487565 CNTLNQ9NXG0 1405 aa11.22□□□□□ -0.61
GARNL3-218ENST00000487565 WASHC2CQ9Y4E1 1318 aa11.21□□□□□ -0.61
GARNL3-218ENST00000487565 FCHSD2O94868 740 aa11.21□□□□□ -0.61
GARNL3-218ENST00000487565 CCER1Q8TC90 406 aaPredicted RBP11.21□□□□□ -0.61
GARNL3-218ENST00000487565 MPHOSPH9Q99550 1183 aa11.21□□□□□ -0.61
GARNL3-218ENST00000487565 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
GARNL3-218ENST00000487565 CLTCQ00610 1675 aaKnown RBP11.2□□□□□ -0.62
GARNL3-218ENST00000487565 ESF1Q9H501 851 aaKnown RBP11.2□□□□□ -0.62
GARNL3-218ENST00000487565 FER1L4A9Z1Z3 1794 aa11.2□□□□□ -0.62
GARNL3-218ENST00000487565 RPRD2Q5VT52 1461 aaKnown RBP11.19□□□□□ -0.62
GARNL3-218ENST00000487565 MROH2AA6NES4 1674 aa11.19□□□□□ -0.62
GARNL3-218ENST00000487565 E9PCH4 1651 aa11.19□□□□□ -0.62
GARNL3-218ENST00000487565 MADDQ8WXG6 1647 aa11.19□□□□□ -0.62
GARNL3-218ENST00000487565 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
GARNL3-218ENST00000487565 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
GARNL3-218ENST00000487565 NPATQ14207 1427 aa11.18□□□□□ -0.62
GARNL3-218ENST00000487565 ARHGAP31Q2M1Z3 1444 aa11.18□□□□□ -0.62
GARNL3-218ENST00000487565 HDGFP51858 240 aaKnown RBP11.17□□□□□ -0.62
GARNL3-218ENST00000487565 WBP1LQ9NX94 342 aa11.17□□□□□ -0.62
GARNL3-218ENST00000487565 TRPM2O94759 1503 aa11.17□□□□□ -0.62
GARNL3-218ENST00000487565 ADAMTSL3P82987 1691 aa11.17□□□□□ -0.62
GARNL3-218ENST00000487565 CLSPNQ9HAW4 1339 aa11.16□□□□□ -0.62
GARNL3-218ENST00000487565 TSR3Q9UJK0 312 aaKnown RBP11.16□□□□□ -0.62
GARNL3-218ENST00000487565 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
GARNL3-218ENST00000487565 SPHKAPQ2M3C7 1700 aa11.15□□□□□ -0.62
GARNL3-218ENST00000487565 ERVK-7P63135 1459 aa11.15□□□□□ -0.62
GARNL3-218ENST00000487565 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
GARNL3-218ENST00000487565 EYA1Q99502 592 aa11.14□□□□□ -0.63
GARNL3-218ENST00000487565 ANKRD30BQ9BXX2 1392 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms