RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 CPSF1Q10570 1443 aaKnown RBP13.28□□□□□ -0.28
CTPS1-210ENST00000486889 HAP1P54257 671 aaPredicted RBP13.27□□□□□ -0.29
CTPS1-210ENST00000486889 NLRP13Q86W25 1043 aa13.27□□□□□ -0.29
CTPS1-210ENST00000486889 ABTB2Q8N961 1025 aa13.27□□□□□ -0.29
CTPS1-210ENST00000486889 SBNO1A3KN83 1393 aa13.27□□□□□ -0.29
CTPS1-210ENST00000486889 NSD2O96028 1365 aa13.27□□□□□ -0.29
CTPS1-210ENST00000486889 USP6P35125 1406 aa13.27□□□□□ -0.29
CTPS1-210ENST00000486889 PHLPP1O60346 1717 aa13.26□□□□□ -0.29
CTPS1-210ENST00000486889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.26□□□□□ -0.29
CTPS1-210ENST00000486889 COG3Q96JB2 828 aa13.26□□□□□ -0.29
CTPS1-210ENST00000486889 NSD3Q9BZ95 1437 aa13.25□□□□□ -0.29
CTPS1-210ENST00000486889 TTC21BQ7Z4L5 1316 aa13.25□□□□□ -0.29
CTPS1-210ENST00000486889 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
CTPS1-210ENST00000486889 SOS2Q07890 1332 aaPredicted RBP13.24□□□□□ -0.29
CTPS1-210ENST00000486889 ANP32CO43423 234 aa13.24□□□□□ -0.29
CTPS1-210ENST00000486889 KCNH5Q8NCM2 988 aa13.24□□□□□ -0.29
CTPS1-210ENST00000486889 MYOM1P52179 1685 aa13.24□□□□□ -0.29
CTPS1-210ENST00000486889 AKAP12Q02952 1782 aa13.23□□□□□ -0.29
CTPS1-210ENST00000486889 NLRP6P59044 892 aa13.23□□□□□ -0.29
CTPS1-210ENST00000486889 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
CTPS1-210ENST00000486889 AHDC1Q5TGY3 1603 aaPredicted RBP13.23□□□□□ -0.29
CTPS1-210ENST00000486889 MORC1Q86VD1 984 aa13.22□□□□□ -0.29
CTPS1-210ENST00000486889 MON2Q7Z3U7 1717 aa13.22□□□□□ -0.29
CTPS1-210ENST00000486889 TNS3Q68CZ2 1445 aa13.22□□□□□ -0.29
CTPS1-210ENST00000486889 JCADQ9P266 1359 aa13.21□□□□□ -0.29
CTPS1-210ENST00000486889 NPC1L1Q9UHC9 1359 aa13.21□□□□□ -0.29
CTPS1-210ENST00000486889 NHSL1Q5SYE7 1610 aa13.21□□□□□ -0.29
CTPS1-210ENST00000486889 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.29
CTPS1-210ENST00000486889 RALBP1Q15311 655 aa13.2□□□□□ -0.3
CTPS1-210ENST00000486889 CARD14Q9BXL6 1004 aa13.2□□□□□ -0.3
CTPS1-210ENST00000486889 PXDNQ92626 1479 aa13.2□□□□□ -0.3
CTPS1-210ENST00000486889 CD163L1Q9NR16 1453 aa13.2□□□□□ -0.3
CTPS1-210ENST00000486889 NUTM2BA6NNL0 878 aaPredicted RBP13.19□□□□□ -0.3
CTPS1-210ENST00000486889 NUTM2EB1AL46 878 aaPredicted RBP13.19□□□□□ -0.3
CTPS1-210ENST00000486889 DIEXFQ68CQ4 756 aaKnown RBP13.19□□□□□ -0.3
CTPS1-210ENST00000486889 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
CTPS1-210ENST00000486889 RGS17Q9UGC6 210 aaPredicted RBP13.19□□□□□ -0.3
CTPS1-210ENST00000486889 FYB1O15117 783 aa13.18□□□□□ -0.3
CTPS1-210ENST00000486889 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
CTPS1-210ENST00000486889 CC2D1BQ5T0F9 858 aaKnown RBP13.18□□□□□ -0.3
CTPS1-210ENST00000486889 DDX17Q92841 729 aaKnown RBP13.18□□□□□ -0.3
CTPS1-210ENST00000486889 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
CTPS1-210ENST00000486889 SSH2Q76I76 1423 aa13.17□□□□□ -0.3
CTPS1-210ENST00000486889 POTEAQ6S8J7 498 aa13.17□□□□□ -0.3
CTPS1-210ENST00000486889 NME9Q86XW9 330 aa13.17□□□□□ -0.3
CTPS1-210ENST00000486889 GGNBP2Q9H3C7 697 aa13.17□□□□□ -0.3
CTPS1-210ENST00000486889 USP31Q70CQ4 1352 aa13.17□□□□□ -0.3
CTPS1-210ENST00000486889 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
CTPS1-210ENST00000486889 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
CTPS1-210ENST00000486889 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
CTPS1-210ENST00000486889 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
CTPS1-210ENST00000486889 NUTM2GQ5VZR2 741 aa13.15□□□□□ -0.3
CTPS1-210ENST00000486889 CFAP53Q96M91 514 aa13.15□□□□□ -0.3
CTPS1-210ENST00000486889 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
CTPS1-210ENST00000486889 TRPM3Q9HCF6 1732 aaPredicted RBP13.14□□□□□ -0.31
CTPS1-210ENST00000486889 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
CTPS1-210ENST00000486889 GCP02774 474 aa13.13□□□□□ -0.31
CTPS1-210ENST00000486889 AMPHP49418 695 aa13.13□□□□□ -0.31
CTPS1-210ENST00000486889 ALS2Q96Q42 1657 aa13.12□□□□□ -0.31
CTPS1-210ENST00000486889 SOX12O15370 315 aa13.12□□□□□ -0.31
CTPS1-210ENST00000486889 TNNT2P45379 298 aaPredicted RBP13.12□□□□□ -0.31
CTPS1-210ENST00000486889 ZNF772Q68DY9 489 aaPredicted RBP13.12□□□□□ -0.31
CTPS1-210ENST00000486889 USP19O94966 1318 aa13.12□□□□□ -0.31
CTPS1-210ENST00000486889 ANKRD26Q9UPS8 1709 aa13.11□□□□□ -0.31
CTPS1-210ENST00000486889 KIF24Q5T7B8 1368 aa13.11□□□□□ -0.31
CTPS1-210ENST00000486889 AATKQ6ZMQ8 1374 aa13.11□□□□□ -0.31
CTPS1-210ENST00000486889 PNPLA6Q8IY17 1366 aa13.11□□□□□ -0.31
CTPS1-210ENST00000486889 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
CTPS1-210ENST00000486889 PPM1GO15355 546 aaPredicted RBP13.11□□□□□ -0.31
CTPS1-210ENST00000486889 OVOS2A0A0J9YW53 1432 aa13.11□□□□□ -0.31
CTPS1-210ENST00000486889 OVOS2Q6IE36 1432 aa13.11□□□□□ -0.31
CTPS1-210ENST00000486889 PIK3C2AO00443 1686 aa13.11□□□□□ -0.31
CTPS1-210ENST00000486889 MYBBP1AQ9BQG0 1328 aaKnown RBP13.11□□□□□ -0.31
CTPS1-210ENST00000486889 SHPRHQ149N8 1683 aa13.1□□□□□ -0.31
CTPS1-210ENST00000486889 PRKRIP1Q9H875 184 aaPredicted RBP13.1□□□□□ -0.31
CTPS1-210ENST00000486889 PRDM11Q9NQV5 511 aa13.1□□□□□ -0.31
CTPS1-210ENST00000486889 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
CTPS1-210ENST00000486889 NUDCQ9Y266 331 aa13.09□□□□□ -0.31
CTPS1-210ENST00000486889 COL22A1Q8NFW1 1626 aaPredicted RBP13.09□□□□□ -0.31
CTPS1-210ENST00000486889 USP54Q70EL1 1684 aa13.08□□□□□ -0.31
CTPS1-210ENST00000486889 PARD3Q8TEW0 1356 aa13.08□□□□□ -0.31
CTPS1-210ENST00000486889 ZC3H6P61129 1189 aaKnown RBP13.08□□□□□ -0.32
CTPS1-210ENST00000486889 C8orf37Q96NL8 207 aa13.08□□□□□ -0.32
CTPS1-210ENST00000486889 LRP6O75581 1613 aa13.08□□□□□ -0.32
CTPS1-210ENST00000486889 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
CTPS1-210ENST00000486889 EVA1CP58658 441 aa13.07□□□□□ -0.32
CTPS1-210ENST00000486889 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
CTPS1-210ENST00000486889 CABLES1Q8TDN4 633 aa13.07□□□□□ -0.32
CTPS1-210ENST00000486889 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
CTPS1-210ENST00000486889 SLIT3O75094 1523 aa13.07□□□□□ -0.32
CTPS1-210ENST00000486889 CPDO75976 1380 aa13.07□□□□□ -0.32
CTPS1-210ENST00000486889 FLT4P35916 1363 aa13.07□□□□□ -0.32
CTPS1-210ENST00000486889 ADAMTS2O95450 1211 aa13.06□□□□□ -0.32
CTPS1-210ENST00000486889 RXRBP28702 533 aa13.06□□□□□ -0.32
CTPS1-210ENST00000486889 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
CTPS1-210ENST00000486889 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
CTPS1-210ENST00000486889 NEFMP07197 916 aa13.05□□□□□ -0.32
CTPS1-210ENST00000486889 CSB-PGBD3P0DP91 1061 aa13.05□□□□□ -0.32
CTPS1-210ENST00000486889 MTHFSP49914 203 aa13.05□□□□□ -0.32
CTPS1-210ENST00000486889 ARHGEF25Q86VW2 580 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms