RNA–Protein interactions for RNA: ENST00000486506.5

MECP2-209, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 2,907 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-209ENST00000486506 TMF1P82094 1093 aa10.03□□□□□ -0.8
MECP2-209ENST00000486506 PRAM1Q96QH2 718 aa10.03□□□□□ -0.8
MECP2-209ENST00000486506 LAMC1P11047 1609 aa10.03□□□□□ -0.8
MECP2-209ENST00000486506 ADAMTS13Q76LX8 1427 aa10.03□□□□□ -0.8
MECP2-209ENST00000486506 YTHDC2Q9H6S0 1430 aaKnown RBP10.03□□□□□ -0.8
MECP2-209ENST00000486506 WAPLQ7Z5K2 1190 aa10.03□□□□□ -0.8
MECP2-209ENST00000486506 SETBP1Q9Y6X0 1596 aa10.03□□□□□ -0.8
MECP2-209ENST00000486506 POGKQ9P215 609 aa10.02□□□□□ -0.81
MECP2-209ENST00000486506 KCNG1Q9UIX4 513 aa10.02□□□□□ -0.81
MECP2-209ENST00000486506 VGLL3A8MV65 326 aa10.02□□□□□ -0.81
MECP2-209ENST00000486506 ZBED9Q6R2W3 1325 aa10.02□□□□□ -0.81
MECP2-209ENST00000486506 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.81
MECP2-209ENST00000486506 IQGAP1P46940 1657 aa10.01□□□□□ -0.81
MECP2-209ENST00000486506 WWC1Q8IX03 1113 aa10.01□□□□□ -0.81
MECP2-209ENST00000486506 NRXN3Q9Y4C0 1643 aa10.01□□□□□ -0.81
MECP2-209ENST00000486506 TERF1P54274 439 aa10.01□□□□□ -0.81
MECP2-209ENST00000486506 MINK1Q8N4C8 1332 aaPredicted RBP10□□□□□ -0.81
MECP2-209ENST00000486506 TBX22Q9Y458 520 aa10□□□□□ -0.81
MECP2-209ENST00000486506 LRPPRCP42704 1394 aaKnown RBP9.99□□□□□ -0.81
MECP2-209ENST00000486506 PLEKHH1Q9ULM0 1364 aa9.99□□□□□ -0.81
MECP2-209ENST00000486506 RNF123Q5XPI4 1314 aa9.99□□□□□ -0.81
MECP2-209ENST00000486506 TCERG1O14776 1098 aaKnown RBP9.99□□□□□ -0.81
MECP2-209ENST00000486506 PTMAP06454 111 aaKnown RBP9.99□□□□□ -0.81
MECP2-209ENST00000486506 AMOTL2Q9Y2J4 779 aa9.99□□□□□ -0.81
MECP2-209ENST00000486506 GRIPAP1Q4V328 841 aa9.98□□□□□ -0.81
MECP2-209ENST00000486506 CCDC184Q52MB2 194 aa9.98□□□□□ -0.81
MECP2-209ENST00000486506 GTPBP4Q9BZE4 634 aaKnown RBP9.98□□□□□ -0.81
MECP2-209ENST00000486506 ZNF142P52746 1687 aaPredicted RBP9.98□□□□□ -0.81
MECP2-209ENST00000486506 ABCC11Q96J66 1382 aa9.98□□□□□ -0.81
MECP2-209ENST00000486506 LETM1O95202 739 aaPredicted RBP9.98□□□□□ -0.81
MECP2-209ENST00000486506 AXDND1Q5T1B0 1012 aaPredicted RBP9.98□□□□□ -0.81
MECP2-209ENST00000486506 MED14O60244 1454 aa9.97□□□□□ -0.81
MECP2-209ENST00000486506 TICAM2Q86XR7 235 aa9.97□□□□□ -0.81
MECP2-209ENST00000486506 CABP2Q9NPB3 220 aa9.97□□□□□ -0.81
MECP2-209ENST00000486506 PTPRUQ92729 1446 aa9.97□□□□□ -0.81
MECP2-209ENST00000486506 ROBO2Q9HCK4 1378 aa9.97□□□□□ -0.81
MECP2-209ENST00000486506 SETD1AO15047 1707 aaKnown RBP9.97□□□□□ -0.81
MECP2-209ENST00000486506 SMG6Q86US8 1419 aaKnown RBP9.96□□□□□ -0.81
MECP2-209ENST00000486506 PTMSP20962 102 aa9.96□□□□□ -0.81
MECP2-209ENST00000486506 PDE4AP27815 886 aa9.96□□□□□ -0.81
MECP2-209ENST00000486506 ZNF622Q969S3 477 aaKnown RBP eCLIP9.96□□□□□ -0.816e-14■□□□□ 8.7
MECP2-209ENST00000486506 RBM33Q96EV2 1170 aaKnown RBP9.96□□□□□ -0.81
MECP2-209ENST00000486506 KCNA6P17658 529 aa9.96□□□□□ -0.81
MECP2-209ENST00000486506 FAM193AP78312 1265 aa9.96□□□□□ -0.81
MECP2-209ENST00000486506 SLC20A2Q08357 652 aa9.96□□□□□ -0.81
MECP2-209ENST00000486506 CDCA8Q53HL2 280 aa9.96□□□□□ -0.81
MECP2-209ENST00000486506 ARID3AQ99856 593 aa9.96□□□□□ -0.81
MECP2-209ENST00000486506 BACH2Q9BYV9 841 aa9.96□□□□□ -0.81
MECP2-209ENST00000486506 SBNO2Q9Y2G9 1366 aa9.96□□□□□ -0.82
MECP2-209ENST00000486506 MS4A1P11836 297 aa9.96□□□□□ -0.82
MECP2-209ENST00000486506 SRPK2P78362 688 aaKnown RBP9.96□□□□□ -0.82
MECP2-209ENST00000486506 HDAC5Q9UQL6 1122 aa9.96□□□□□ -0.82
MECP2-209ENST00000486506 CCDC9Q9Y3X0 531 aaKnown RBP9.96□□□□□ -0.82
MECP2-209ENST00000486506 NPHP4O75161 1426 aaPredicted RBP9.95□□□□□ -0.82
MECP2-209ENST00000486506 DNTTIP2Q5QJE6 756 aaKnown RBP9.95□□□□□ -0.82
MECP2-209ENST00000486506 TMC1Q8TDI8 760 aa9.95□□□□□ -0.82
MECP2-209ENST00000486506 EVC2Q86UK5 1308 aa9.95□□□□□ -0.82
MECP2-209ENST00000486506 ARHGEF28Q8N1W1 1705 aaKnown RBP9.95□□□□□ -0.82
MECP2-209ENST00000486506 LMTK3Q96Q04 1460 aa9.95□□□□□ -0.82
MECP2-209ENST00000486506 FAM9BQ8IZU0 186 aa9.95□□□□□ -0.82
MECP2-209ENST00000486506 PANK3Q9H999 370 aa9.95□□□□□ -0.82
MECP2-209ENST00000486506 ZSCAN20P17040 1043 aaPredicted RBP9.94□□□□□ -0.82
MECP2-209ENST00000486506 SLC12A5Q9H2X9 1139 aa9.94□□□□□ -0.82
MECP2-209ENST00000486506 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
MECP2-209ENST00000486506 GOLGA6L3A6NEY3 463 aa9.93□□□□□ -0.82
MECP2-209ENST00000486506 ESPNB1AK53 854 aa9.93□□□□□ -0.82
MECP2-209ENST00000486506 CDK19Q9BWU1 502 aa9.93□□□□□ -0.82
MECP2-209ENST00000486506 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.93□□□□□ -0.82
MECP2-209ENST00000486506 QRICH2Q9H0J4 1663 aa9.93□□□□□ -0.82
MECP2-209ENST00000486506 CC2D1BQ5T0F9 858 aaKnown RBP9.93□□□□□ -0.82
MECP2-209ENST00000486506 TECPR2O15040 1411 aa9.93□□□□□ -0.82
MECP2-209ENST00000486506 TRIM44Q96DX7 344 aaPredicted RBP9.93□□□□□ -0.82
MECP2-209ENST00000486506 PRDM10Q9NQV6 1147 aa9.92□□□□□ -0.82
MECP2-209ENST00000486506 TULP4Q9NRJ4 1543 aa9.92□□□□□ -0.82
MECP2-209ENST00000486506 FRAT2O75474 233 aaPredicted RBP9.92□□□□□ -0.82
MECP2-209ENST00000486506 PSEN1P49768 467 aa9.92□□□□□ -0.82
MECP2-209ENST00000486506 KIAA1211Q6ZU35 1233 aa9.92□□□□□ -0.82
MECP2-209ENST00000486506 FAM135BQ49AJ0 1406 aa9.91□□□□□ -0.82
MECP2-209ENST00000486506 POLR1AO95602 1720 aaPredicted RBP9.91□□□□□ -0.82
MECP2-209ENST00000486506 DLC1Q96QB1 1528 aa9.91□□□□□ -0.82
MECP2-209ENST00000486506 SIRT1Q96EB6 747 aa9.91□□□□□ -0.82
MECP2-209ENST00000486506 WASLO00401 505 aaPredicted RBP9.91□□□□□ -0.82
MECP2-209ENST00000486506 PER1O15534 1290 aaPredicted RBP9.91□□□□□ -0.82
MECP2-209ENST00000486506 APPP05067 770 aa9.9□□□□□ -0.82
MECP2-209ENST00000486506 MCCP23508 829 aa9.9□□□□□ -0.82
MECP2-209ENST00000486506 RIPK4P57078 832 aa9.9□□□□□ -0.82
MECP2-209ENST00000486506 TPRNQ4KMQ1 711 aa9.9□□□□□ -0.82
MECP2-209ENST00000486506 PIK3R4Q99570 1358 aa9.9□□□□□ -0.82
MECP2-209ENST00000486506 HMGB1P09429 215 aaKnown RBP9.9□□□□□ -0.82
MECP2-209ENST00000486506 NUDCQ9Y266 331 aa9.9□□□□□ -0.82
MECP2-209ENST00000486506 PRKRIP1Q9H875 184 aaPredicted RBP9.89□□□□□ -0.83
MECP2-209ENST00000486506 DIP2AQ14689 1571 aa9.89□□□□□ -0.83
MECP2-209ENST00000486506 CPS1P31327 1500 aa9.89□□□□□ -0.83
MECP2-209ENST00000486506 CABP1Q9NZU7 370 aa9.89□□□□□ -0.83
MECP2-209ENST00000486506 DNAJC2Q99543 621 aaKnown RBP9.89□□□□□ -0.83
MECP2-209ENST00000486506 CARD14Q9BXL6 1004 aa9.89□□□□□ -0.83
MECP2-209ENST00000486506 PATL2C9JE40 543 aaKnown RBP9.88□□□□□ -0.83
MECP2-209ENST00000486506 CLSTN1O94985 981 aa9.88□□□□□ -0.83
MECP2-209ENST00000486506 XRCC6P12956 609 aaKnown RBP eCLIP9.88□□□□□ -0.83
MECP2-209ENST00000486506 MRS2Q9HD23 443 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms