RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 NGLY1Q96IV0 654 aa17.48■□□□□ 0.39
HMG20B-211ENST00000486028 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
HMG20B-211ENST00000486028 ILDR2Q71H61 639 aa17.47■□□□□ 0.39
HMG20B-211ENST00000486028 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
HMG20B-211ENST00000486028 TOPAZ1Q8N9V7 1692 aa17.47■□□□□ 0.39
HMG20B-211ENST00000486028 CABLES1Q8TDN4 633 aa17.46■□□□□ 0.39
HMG20B-211ENST00000486028 BRD4O60885 1362 aaPredicted RBP17.45■□□□□ 0.38
HMG20B-211ENST00000486028 TMF1P82094 1093 aa17.45■□□□□ 0.38
HMG20B-211ENST00000486028 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
HMG20B-211ENST00000486028 AFF2P51816 1311 aa17.45■□□□□ 0.38
HMG20B-211ENST00000486028 POTEAQ6S8J7 498 aa17.44■□□□□ 0.38
HMG20B-211ENST00000486028 ZBTB22O15209 634 aa17.43■□□□□ 0.38
HMG20B-211ENST00000486028 ABTB2Q8N961 1025 aa17.43■□□□□ 0.38
HMG20B-211ENST00000486028 TRPM3Q9HCF6 1732 aaPredicted RBP17.43■□□□□ 0.38
HMG20B-211ENST00000486028 CDCA8Q53HL2 280 aa17.42■□□□□ 0.38
HMG20B-211ENST00000486028 FNBP4Q8N3X1 1017 aaPredicted RBP17.42■□□□□ 0.38
HMG20B-211ENST00000486028 USP6P35125 1406 aa17.41■□□□□ 0.38
HMG20B-211ENST00000486028 EIF4G2P78344 907 aaKnown RBP eCLIP17.41■□□□□ 0.38
HMG20B-211ENST00000486028 SLC12A5Q9H2X9 1139 aa17.41■□□□□ 0.38
HMG20B-211ENST00000486028 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
HMG20B-211ENST00000486028 HDGFL2Q7Z4V5 671 aaPredicted RBP17.4■□□□□ 0.38
HMG20B-211ENST00000486028 NLRP13Q86W25 1043 aa17.4■□□□□ 0.38
HMG20B-211ENST00000486028 TERF2IPQ9NYB0 399 aa17.4■□□□□ 0.38
HMG20B-211ENST00000486028 USP21Q9UK80 565 aa17.4■□□□□ 0.38
HMG20B-211ENST00000486028 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
HMG20B-211ENST00000486028 QTRT2Q9H974 415 aaKnown RBP17.39■□□□□ 0.37
HMG20B-211ENST00000486028 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.37
HMG20B-211ENST00000486028 NINLQ9Y2I6 1382 aa17.38■□□□□ 0.37
HMG20B-211ENST00000486028 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
HMG20B-211ENST00000486028 FAM83GA6ND36 823 aa17.37■□□□□ 0.37
HMG20B-211ENST00000486028 HSPA5P11021 654 aaKnown RBP17.37■□□□□ 0.37
HMG20B-211ENST00000486028 RXRBP28702 533 aa17.37■□□□□ 0.37
HMG20B-211ENST00000486028 NLRP6P59044 892 aa17.37■□□□□ 0.37
HMG20B-211ENST00000486028 TTC21BQ7Z4L5 1316 aa17.37■□□□□ 0.37
HMG20B-211ENST00000486028 SSH2Q76I76 1423 aa17.37■□□□□ 0.37
HMG20B-211ENST00000486028 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
HMG20B-211ENST00000486028 TTC21AQ8NDW8 1320 aa17.36■□□□□ 0.37
HMG20B-211ENST00000486028 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
HMG20B-211ENST00000486028 CNKSR2Q8WXI2 1034 aa17.34■□□□□ 0.37
HMG20B-211ENST00000486028 USP19O94966 1318 aa17.33■□□□□ 0.36
HMG20B-211ENST00000486028 GCP02774 474 aa17.33■□□□□ 0.36
HMG20B-211ENST00000486028 RBM6P78332 1123 aaKnown RBP17.33■□□□□ 0.36
HMG20B-211ENST00000486028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.33■□□□□ 0.36
HMG20B-211ENST00000486028 PRDM11Q9NQV5 511 aa17.33■□□□□ 0.36
HMG20B-211ENST00000486028 BCL9LQ86UU0 1499 aa17.32■□□□□ 0.36
HMG20B-211ENST00000486028 ZC3H6P61129 1189 aaKnown RBP17.32■□□□□ 0.36
HMG20B-211ENST00000486028 MARF1Q9Y4F3 1742 aaKnown RBP17.32■□□□□ 0.36
HMG20B-211ENST00000486028 CD163L1Q9NR16 1453 aa17.31■□□□□ 0.36
HMG20B-211ENST00000486028 SLIT2O94813 1529 aa17.31■□□□□ 0.36
HMG20B-211ENST00000486028 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
HMG20B-211ENST00000486028 ABCA3Q99758 1704 aa17.3■□□□□ 0.36
HMG20B-211ENST00000486028 A0A1W2PP64 1363 aa17.3■□□□□ 0.36
HMG20B-211ENST00000486028 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
HMG20B-211ENST00000486028 SOCS7O14512 581 aa17.3■□□□□ 0.36
HMG20B-211ENST00000486028 ATRNO75882 1429 aa17.3■□□□□ 0.36
HMG20B-211ENST00000486028 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
HMG20B-211ENST00000486028 KCNH5Q8NCM2 988 aa17.29■□□□□ 0.36
HMG20B-211ENST00000486028 BTG4Q9NY30 223 aa17.29■□□□□ 0.36
HMG20B-211ENST00000486028 ANKRD36BQ8N2N9 1353 aa17.28■□□□□ 0.36
HMG20B-211ENST00000486028 CHRNA2Q15822 529 aa17.28■□□□□ 0.36
HMG20B-211ENST00000486028 GJD4Q96KN9 370 aaPredicted RBP17.28■□□□□ 0.36
HMG20B-211ENST00000486028 POLR3GLQ9BT43 218 aa17.28■□□□□ 0.36
HMG20B-211ENST00000486028 CPDO75976 1380 aa17.28■□□□□ 0.36
HMG20B-211ENST00000486028 VPS72Q15906 364 aa17.27■□□□□ 0.36
HMG20B-211ENST00000486028 NME9Q86XW9 330 aa17.27■□□□□ 0.36
HMG20B-211ENST00000486028 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.35
HMG20B-211ENST00000486028 ZRANB1Q9UGI0 708 aa17.26■□□□□ 0.35
HMG20B-211ENST00000486028 CCDC9Q9Y3X0 531 aaKnown RBP17.26■□□□□ 0.35
HMG20B-211ENST00000486028 CRYBG1Q9Y4K1 1723 aa17.26■□□□□ 0.35
HMG20B-211ENST00000486028 USP31Q70CQ4 1352 aa17.26■□□□□ 0.35
HMG20B-211ENST00000486028 PIK3C2AO00443 1686 aa17.25■□□□□ 0.35
HMG20B-211ENST00000486028 COL14A1Q05707 1796 aaKnown RBP17.25■□□□□ 0.35
HMG20B-211ENST00000486028 PHRF1Q9P1Y6 1649 aaKnown RBP17.25■□□□□ 0.35
HMG20B-211ENST00000486028 CDK12Q9NYV4 1490 aaPredicted RBP17.24■□□□□ 0.35
HMG20B-211ENST00000486028 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
HMG20B-211ENST00000486028 SOX12O15370 315 aa17.24■□□□□ 0.35
HMG20B-211ENST00000486028 EVA1CP58658 441 aa17.24■□□□□ 0.35
HMG20B-211ENST00000486028 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
HMG20B-211ENST00000486028 SLIT3O75094 1523 aa17.23■□□□□ 0.35
HMG20B-211ENST00000486028 NWD2Q9ULI1 1742 aa17.23■□□□□ 0.35
HMG20B-211ENST00000486028 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
HMG20B-211ENST00000486028 PLCH1Q4KWH8 1693 aa17.22■□□□□ 0.35
HMG20B-211ENST00000486028 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.21■□□□□ 0.35
HMG20B-211ENST00000486028 AATKQ6ZMQ8 1374 aa17.21■□□□□ 0.35
HMG20B-211ENST00000486028 C11orf95C9JLR9 678 aaPredicted RBP17.21■□□□□ 0.35
HMG20B-211ENST00000486028 ARHGEF25Q86VW2 580 aa17.21■□□□□ 0.35
HMG20B-211ENST00000486028 COG3Q96JB2 828 aa17.21■□□□□ 0.35
HMG20B-211ENST00000486028 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
HMG20B-211ENST00000486028 FYB1O15117 783 aa17.19■□□□□ 0.34
HMG20B-211ENST00000486028 SPATA31A5Q5VU36 1347 aa17.19■□□□□ 0.34
HMG20B-211ENST00000486028 SPATA31A7Q8IWB4 1347 aa17.19■□□□□ 0.34
HMG20B-211ENST00000486028 RGS12O14924 1447 aa17.18■□□□□ 0.34
HMG20B-211ENST00000486028 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
HMG20B-211ENST00000486028 ONECUT3O60422 494 aaPredicted RBP17.17■□□□□ 0.34
HMG20B-211ENST00000486028 GGNBP2Q9H3C7 697 aa17.17■□□□□ 0.34
HMG20B-211ENST00000486028 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
HMG20B-211ENST00000486028 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
HMG20B-211ENST00000486028 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
HMG20B-211ENST00000486028 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
HMG20B-211ENST00000486028 PANK3Q9H999 370 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms