RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 KRT28Q7Z3Y7 464 aa11.04□□□□□ -0.64
MACF1-220ENST00000485063 NGDNQ8NEJ9 315 aaKnown RBP11.04□□□□□ -0.64
MACF1-220ENST00000485063 PMFBP1Q8TBY8 1022 aa11.04□□□□□ -0.64
MACF1-220ENST00000485063 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
MACF1-220ENST00000485063 XPCQ01831 940 aaPredicted RBP11.03□□□□□ -0.64
MACF1-220ENST00000485063 CCDC61Q9Y6R9 512 aa11.03□□□□□ -0.64
MACF1-220ENST00000485063 PXDNQ92626 1479 aa11.03□□□□□ -0.64
MACF1-220ENST00000485063 ATP7BP35670 1465 aa11.02□□□□□ -0.65
MACF1-220ENST00000485063 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
MACF1-220ENST00000485063 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
MACF1-220ENST00000485063 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.65
MACF1-220ENST00000485063 PRR36Q9H6K5 1346 aa11.02□□□□□ -0.65
MACF1-220ENST00000485063 PNPLA6Q8IY17 1366 aa11.02□□□□□ -0.65
MACF1-220ENST00000485063 TOPAZ1Q8N9V7 1692 aa11.01□□□□□ -0.65
MACF1-220ENST00000485063 LMOD2Q6P5Q4 547 aa11.01□□□□□ -0.65
MACF1-220ENST00000485063 CABP2Q9NPB3 220 aa11.01□□□□□ -0.65
MACF1-220ENST00000485063 SBNO2Q9Y2G9 1366 aa11.01□□□□□ -0.65
MACF1-220ENST00000485063 COL22A1Q8NFW1 1626 aaPredicted RBP11□□□□□ -0.65
MACF1-220ENST00000485063 HAP1P54257 671 aaPredicted RBP11□□□□□ -0.65
MACF1-220ENST00000485063 SPATA31A3Q5VYP0 1347 aa11□□□□□ -0.65
MACF1-220ENST00000485063 SBNO1A3KN83 1393 aa11□□□□□ -0.65
MACF1-220ENST00000485063 PPIP5K1Q6PFW1 1433 aa11□□□□□ -0.65
MACF1-220ENST00000485063 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
MACF1-220ENST00000485063 ARHGEF10O15013 1369 aa10.99□□□□□ -0.65
MACF1-220ENST00000485063 TNS3Q68CZ2 1445 aa10.99□□□□□ -0.65
MACF1-220ENST00000485063 PLEKHG3A1L390 1219 aa10.98□□□□□ -0.65
MACF1-220ENST00000485063 ACEP12821 1306 aa10.98□□□□□ -0.65
MACF1-220ENST00000485063 ATAD2Q6PL18 1390 aa10.98□□□□□ -0.65
MACF1-220ENST00000485063 LRP6O75581 1613 aa10.98□□□□□ -0.65
MACF1-220ENST00000485063 ST20-MTHFSA0A0A6YYL1 179 aa10.97□□□□□ -0.65
MACF1-220ENST00000485063 POLR3AO14802 1390 aaPredicted RBP10.97□□□□□ -0.65
MACF1-220ENST00000485063 USP47Q96K76 1375 aa10.97□□□□□ -0.65
MACF1-220ENST00000485063 TRPM3Q9HCF6 1732 aaPredicted RBP10.97□□□□□ -0.65
MACF1-220ENST00000485063 MARF1Q9Y4F3 1742 aaKnown RBP10.97□□□□□ -0.65
MACF1-220ENST00000485063 ADAMTS2O95450 1211 aa10.96□□□□□ -0.65
MACF1-220ENST00000485063 ZNF772Q68DY9 489 aaPredicted RBP10.96□□□□□ -0.65
MACF1-220ENST00000485063 C8orf37Q96NL8 207 aa10.96□□□□□ -0.65
MACF1-220ENST00000485063 CABP1Q9NZU7 370 aa10.96□□□□□ -0.65
MACF1-220ENST00000485063 ALS2Q96Q42 1657 aa10.95□□□□□ -0.66
MACF1-220ENST00000485063 BRD4O60885 1362 aaPredicted RBP10.95□□□□□ -0.66
MACF1-220ENST00000485063 TMF1P82094 1093 aa10.95□□□□□ -0.66
MACF1-220ENST00000485063 NGLY1Q96IV0 654 aa10.95□□□□□ -0.66
MACF1-220ENST00000485063 PUS7Q96PZ0 661 aaKnown RBP10.95□□□□□ -0.66
MACF1-220ENST00000485063 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
MACF1-220ENST00000485063 PLEKHG5O94827 1062 aa10.94□□□□□ -0.66
MACF1-220ENST00000485063 CDCA8Q53HL2 280 aa10.94□□□□□ -0.66
MACF1-220ENST00000485063 TMC1Q8TDI8 760 aa10.94□□□□□ -0.66
MACF1-220ENST00000485063 AKAP12Q02952 1782 aa10.93□□□□□ -0.66
MACF1-220ENST00000485063 HDGFL2Q7Z4V5 671 aaPredicted RBP10.93□□□□□ -0.66
MACF1-220ENST00000485063 ABTB2Q8N961 1025 aa10.93□□□□□ -0.66
MACF1-220ENST00000485063 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
MACF1-220ENST00000485063 AFF2P51816 1311 aa10.92□□□□□ -0.66
MACF1-220ENST00000485063 EIF4G2P78344 907 aaKnown RBP eCLIP10.92□□□□□ -0.66
MACF1-220ENST00000485063 TESK2Q96S53 571 aa10.92□□□□□ -0.66
MACF1-220ENST00000485063 USP6P35125 1406 aa10.92□□□□□ -0.66
MACF1-220ENST00000485063 NLRP13Q86W25 1043 aa10.91□□□□□ -0.66
MACF1-220ENST00000485063 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
MACF1-220ENST00000485063 CABLES1Q8TDN4 633 aa10.91□□□□□ -0.66
MACF1-220ENST00000485063 TERF2IPQ9NYB0 399 aa10.91□□□□□ -0.66
MACF1-220ENST00000485063 RGS17Q9UGC6 210 aaPredicted RBP10.91□□□□□ -0.66
MACF1-220ENST00000485063 USP21Q9UK80 565 aa10.91□□□□□ -0.66
MACF1-220ENST00000485063 KTN1Q86UP2 1357 aaKnown RBP10.9□□□□□ -0.66
MACF1-220ENST00000485063 NINLQ9Y2I6 1382 aa10.9□□□□□ -0.66
MACF1-220ENST00000485063 MKRN4PQ13434 485 aaPredicted RBP10.9□□□□□ -0.66
MACF1-220ENST00000485063 MON2Q7Z3U7 1717 aa10.89□□□□□ -0.67
MACF1-220ENST00000485063 PHRF1Q9P1Y6 1649 aaKnown RBP10.89□□□□□ -0.67
MACF1-220ENST00000485063 NUTM2GQ5VZR2 741 aa10.89□□□□□ -0.67
MACF1-220ENST00000485063 ILDR2Q71H61 639 aa10.89□□□□□ -0.67
MACF1-220ENST00000485063 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
MACF1-220ENST00000485063 CRYBG1Q9Y4K1 1723 aa10.89□□□□□ -0.67
MACF1-220ENST00000485063 TTC21AQ8NDW8 1320 aa10.88□□□□□ -0.67
MACF1-220ENST00000485063 NLRP6P59044 892 aa10.88□□□□□ -0.67
MACF1-220ENST00000485063 CPSF1Q10570 1443 aaKnown RBP10.88□□□□□ -0.67
MACF1-220ENST00000485063 POTEAQ6S8J7 498 aa10.88□□□□□ -0.67
MACF1-220ENST00000485063 FNBP4Q8N3X1 1017 aaPredicted RBP10.88□□□□□ -0.67
MACF1-220ENST00000485063 SLC12A5Q9H2X9 1139 aa10.88□□□□□ -0.67
MACF1-220ENST00000485063 QTRT2Q9H974 415 aaKnown RBP10.88□□□□□ -0.67
MACF1-220ENST00000485063 TRPC5Q9UL62 973 aaPredicted RBP10.88□□□□□ -0.67
MACF1-220ENST00000485063 TTC21BQ7Z4L5 1316 aa10.87□□□□□ -0.67
MACF1-220ENST00000485063 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.87□□□□□ -0.67
MACF1-220ENST00000485063 NWD2Q9ULI1 1742 aa10.87□□□□□ -0.67
MACF1-220ENST00000485063 HSPA5P11021 654 aaKnown RBP10.87□□□□□ -0.67
MACF1-220ENST00000485063 RXRBP28702 533 aa10.87□□□□□ -0.67
MACF1-220ENST00000485063 PLCH1Q4KWH8 1693 aa10.87□□□□□ -0.67
MACF1-220ENST00000485063 COL14A1Q05707 1796 aaKnown RBP10.87□□□□□ -0.67
MACF1-220ENST00000485063 NRKQ7Z2Y5 1582 aa10.86□□□□□ -0.67
MACF1-220ENST00000485063 POLR3GLQ9BT43 218 aa10.86□□□□□ -0.67
MACF1-220ENST00000485063 PRDM11Q9NQV5 511 aa10.86□□□□□ -0.67
MACF1-220ENST00000485063 PIK3C2AO00443 1686 aa10.85□□□□□ -0.67
MACF1-220ENST00000485063 EDC4Q6P2E9 1401 aaKnown RBP10.85□□□□□ -0.67
MACF1-220ENST00000485063 SSH2Q76I76 1423 aa10.85□□□□□ -0.67
MACF1-220ENST00000485063 RBM6P78332 1123 aaKnown RBP10.85□□□□□ -0.67
MACF1-220ENST00000485063 EVX2Q03828 476 aa10.85□□□□□ -0.67
MACF1-220ENST00000485063 UNC5CLQ8IV45 518 aa10.85□□□□□ -0.67
MACF1-220ENST00000485063 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.85□□□□□ -0.67
MACF1-220ENST00000485063 KCNH5Q8NCM2 988 aa10.85□□□□□ -0.67
MACF1-220ENST00000485063 A0A1W2PP64 1363 aa10.85□□□□□ -0.67
MACF1-220ENST00000485063 SLIT2O94813 1529 aa10.84□□□□□ -0.67
MACF1-220ENST00000485063 GCP02774 474 aa10.84□□□□□ -0.67
MACF1-220ENST00000485063 ZC3H6P61129 1189 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms