RNA–Protein interactions for RNA: ENST00000484751.1

TMEM248-206, Transcript of transmembrane protein 248, humanhuman

TSL 2

Gene TMEM248, Length 739 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-206ENST00000484751 ALKQ9UM73 1620 aa11.02□□□□□ -0.64
TMEM248-206ENST00000484751 ANKRD26Q9UPS8 1709 aa11.02□□□□□ -0.65
TMEM248-206ENST00000484751 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
TMEM248-206ENST00000484751 NUTM2DQ5VT03 806 aaPredicted RBP11.02□□□□□ -0.65
TMEM248-206ENST00000484751 COG6Q9Y2V7 657 aa11.02□□□□□ -0.65
TMEM248-206ENST00000484751 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
TMEM248-206ENST00000484751 KIF16BQ96L93 1317 aa11.02□□□□□ -0.65
TMEM248-206ENST00000484751 FCHSD2O94868 740 aa11.01□□□□□ -0.65
TMEM248-206ENST00000484751 MVPQ14764 893 aaKnown RBP11.01□□□□□ -0.65
TMEM248-206ENST00000484751 PANK1Q8TE04 598 aa11.01□□□□□ -0.65
TMEM248-206ENST00000484751 MINK1Q8N4C8 1332 aaPredicted RBP11.01□□□□□ -0.65
TMEM248-206ENST00000484751 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
TMEM248-206ENST00000484751 ARHGEF40Q8TER5 1519 aa11□□□□□ -0.65
TMEM248-206ENST00000484751 SPATA31D1Q6ZQQ2 1576 aa11□□□□□ -0.65
TMEM248-206ENST00000484751 FYB1O15117 783 aa11□□□□□ -0.65
TMEM248-206ENST00000484751 TMPOP42166 694 aaKnown RBP11□□□□□ -0.65
TMEM248-206ENST00000484751 FAM69CQ0P6D2 419 aa11□□□□□ -0.65
TMEM248-206ENST00000484751 SAFB2Q14151 953 aaKnown RBP eCLIP11□□□□□ -0.65
TMEM248-206ENST00000484751 DZIP1LQ8IYY4 767 aaKnown RBP11□□□□□ -0.65
TMEM248-206ENST00000484751 SIRT1Q96EB6 747 aa11□□□□□ -0.65
TMEM248-206ENST00000484751 CDK19Q9BWU1 502 aa11□□□□□ -0.65
TMEM248-206ENST00000484751 BCL11AQ9H165 835 aa11□□□□□ -0.65
TMEM248-206ENST00000484751 ESF1Q9H501 851 aaKnown RBP11□□□□□ -0.65
TMEM248-206ENST00000484751 DDX19BQ9UMR2 479 aa11□□□□□ -0.65
TMEM248-206ENST00000484751 PNPLA6Q8IY17 1366 aa11□□□□□ -0.65
TMEM248-206ENST00000484751 RIMS2Q9UQ26 1411 aa11□□□□□ -0.65
TMEM248-206ENST00000484751 CDC42BPGQ6DT37 1551 aa10.99□□□□□ -0.65
TMEM248-206ENST00000484751 LMOD3Q0VAK6 560 aa10.99□□□□□ -0.65
TMEM248-206ENST00000484751 ALDH1L2Q3SY69 923 aa10.99□□□□□ -0.65
TMEM248-206ENST00000484751 GGNBP2Q9H3C7 697 aa10.99□□□□□ -0.65
TMEM248-206ENST00000484751 SMC4Q9NTJ3 1288 aa10.99□□□□□ -0.65
TMEM248-206ENST00000484751 DIP2BQ9P265 1576 aa10.99□□□□□ -0.65
TMEM248-206ENST00000484751 CFAP65Q6ZU64 1925 aaKnown RBP10.98□□□□□ -0.65
TMEM248-206ENST00000484751 EIF5BO60841 1220 aaKnown RBP10.98□□□□□ -0.65
TMEM248-206ENST00000484751 PLEKHF1Q96S99 279 aa10.98□□□□□ -0.65
TMEM248-206ENST00000484751 EDC4Q6P2E9 1401 aaKnown RBP10.98□□□□□ -0.65
TMEM248-206ENST00000484751 A2ML1A8K2U0 1454 aa10.98□□□□□ -0.65
TMEM248-206ENST00000484751 NLRP1Q9C000 1473 aa10.98□□□□□ -0.65
TMEM248-206ENST00000484751 IGHDP01880 384 aa10.97□□□□□ -0.65
TMEM248-206ENST00000484751 HAP1P54257 671 aaPredicted RBP10.97□□□□□ -0.65
TMEM248-206ENST00000484751 LAS1LQ9Y4W2 734 aaKnown RBP10.97□□□□□ -0.65
TMEM248-206ENST00000484751 FAM135BQ49AJ0 1406 aa10.97□□□□□ -0.65
TMEM248-206ENST00000484751 CD163L1Q9NR16 1453 aa10.97□□□□□ -0.65
TMEM248-206ENST00000484751 RIPK4P57078 832 aa10.96□□□□□ -0.65
TMEM248-206ENST00000484751 HDAC1Q13547 482 aaPredicted RBP10.96□□□□□ -0.65
TMEM248-206ENST00000484751 CYB5RLQ6IPT4 315 aa10.96□□□□□ -0.65
TMEM248-206ENST00000484751 ATF7IPQ6VMQ6 1270 aa10.96□□□□□ -0.65
TMEM248-206ENST00000484751 AATKQ6ZMQ8 1374 aa10.95□□□□□ -0.66
TMEM248-206ENST00000484751 BRPF1P55201 1214 aaPredicted RBP10.95□□□□□ -0.66
TMEM248-206ENST00000484751 EXOSC9Q06265 439 aaKnown RBP10.95□□□□□ -0.66
TMEM248-206ENST00000484751 FBXO31Q5XUX0 539 aaPredicted RBP10.95□□□□□ -0.66
TMEM248-206ENST00000484751 CABP1Q9NZU7 370 aa10.95□□□□□ -0.66
TMEM248-206ENST00000484751 KIF20BQ96Q89 1820 aa10.95□□□□□ -0.66
TMEM248-206ENST00000484751 PPIP5K1Q6PFW1 1433 aa10.94□□□□□ -0.66
TMEM248-206ENST00000484751 GNAI1P63096 354 aa10.94□□□□□ -0.66
TMEM248-206ENST00000484751 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
TMEM248-206ENST00000484751 TRIM35Q9UPQ4 493 aa10.94□□□□□ -0.66
TMEM248-206ENST00000484751 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
TMEM248-206ENST00000484751 TECPR2O15040 1411 aa10.93□□□□□ -0.66
TMEM248-206ENST00000484751 WASLO00401 505 aaPredicted RBP10.93□□□□□ -0.66
TMEM248-206ENST00000484751 NFE2L2Q16236 605 aa10.93□□□□□ -0.66
TMEM248-206ENST00000484751 SKAP1Q86WV1 359 aa10.93□□□□□ -0.66
TMEM248-206ENST00000484751 ITPRIPQ8IWB1 547 aa10.93□□□□□ -0.66
TMEM248-206ENST00000484751 PDZRN3Q9UPQ7 1066 aa10.93□□□□□ -0.66
TMEM248-206ENST00000484751 RLBP1P12271 317 aa10.92□□□□□ -0.66
TMEM248-206ENST00000484751 ARHGAP45Q92619 1136 aa10.92□□□□□ -0.66
TMEM248-206ENST00000484751 COG3Q96JB2 828 aa10.92□□□□□ -0.66
TMEM248-206ENST00000484751 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
TMEM248-206ENST00000484751 BCL2L13Q9BXK5 485 aa10.92□□□□□ -0.66
TMEM248-206ENST00000484751 IFT57Q9NWB7 429 aa10.92□□□□□ -0.66
TMEM248-206ENST00000484751 PCDHB15Q9Y5E8 787 aa10.92□□□□□ -0.66
TMEM248-206ENST00000484751 VIRMAQ69YN4 1812 aaKnown RBP10.92□□□□□ -0.66
TMEM248-206ENST00000484751 MYO5BQ9ULV0 1848 aa10.92□□□□□ -0.66
TMEM248-206ENST00000484751 CPSF1Q10570 1443 aaKnown RBP10.92□□□□□ -0.66
TMEM248-206ENST00000484751 TRIM27P14373 513 aa10.91□□□□□ -0.66
TMEM248-206ENST00000484751 SSH1Q8WYL5 1049 aa10.91□□□□□ -0.66
TMEM248-206ENST00000484751 TSR2Q969E8 191 aaKnown RBP10.91□□□□□ -0.66
TMEM248-206ENST00000484751 RSPH6AQ9H0K4 717 aa10.91□□□□□ -0.66
TMEM248-206ENST00000484751 CCDC61Q9Y6R9 512 aa10.91□□□□□ -0.66
TMEM248-206ENST00000484751 KNDC1Q76NI1 1749 aa10.9□□□□□ -0.66
TMEM248-206ENST00000484751 PRKAR2BP31323 418 aa10.9□□□□□ -0.66
TMEM248-206ENST00000484751 NFKBIBQ15653 356 aa10.9□□□□□ -0.66
TMEM248-206ENST00000484751 POLKQ9UBT6 870 aa10.9□□□□□ -0.66
TMEM248-206ENST00000484751 RIMBP3CA6NJZ7 1639 aa10.9□□□□□ -0.66
TMEM248-206ENST00000484751 RIMBP3BA6NNM3 1639 aa10.9□□□□□ -0.66
TMEM248-206ENST00000484751 RIMBP3Q9UFD9 1639 aa10.9□□□□□ -0.66
TMEM248-206ENST00000484751 TNRQ92752 1358 aa10.9□□□□□ -0.67
TMEM248-206ENST00000484751 CPS1P31327 1500 aa10.89□□□□□ -0.67
TMEM248-206ENST00000484751 LRRC7Q96NW7 1537 aa10.89□□□□□ -0.67
TMEM248-206ENST00000484751 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.89□□□□□ -0.67
TMEM248-206ENST00000484751 TBC1D32Q96NH3 1257 aa10.89□□□□□ -0.67
TMEM248-206ENST00000484751 NOB1Q9ULX3 412 aaKnown RBP10.89□□□□□ -0.67
TMEM248-206ENST00000484751 KIF24Q5T7B8 1368 aa10.89□□□□□ -0.67
TMEM248-206ENST00000484751 SMC5Q8IY18 1101 aa10.88□□□□□ -0.67
TMEM248-206ENST00000484751 GCC1Q96CN9 775 aa10.88□□□□□ -0.67
TMEM248-206ENST00000484751 NUDT16Q96DE0 195 aaKnown RBP10.88□□□□□ -0.67
TMEM248-206ENST00000484751 API5Q9BZZ5 524 aaKnown RBP10.88□□□□□ -0.67
TMEM248-206ENST00000484751 SETD1AO15047 1707 aaKnown RBP10.87□□□□□ -0.67
TMEM248-206ENST00000484751 GSE1Q14687 1217 aa10.87□□□□□ -0.67
TMEM248-206ENST00000484751 WAPLQ7Z5K2 1190 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 238.3 ms