RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 NLRP13Q86W25 1043 aa19.52■□□□□ 0.72
HDLBP-240ENST00000484412 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.72
HDLBP-240ENST00000484412 HSPA5P11021 654 aaKnown RBP19.51■□□□□ 0.71
HDLBP-240ENST00000484412 CD163L1Q9NR16 1453 aa19.5■□□□□ 0.71
HDLBP-240ENST00000484412 NUTM2BA6NNL0 878 aaPredicted RBP19.5■□□□□ 0.71
HDLBP-240ENST00000484412 NUTM2EB1AL46 878 aaPredicted RBP19.5■□□□□ 0.71
HDLBP-240ENST00000484412 NUTM2AQ8IVF1 878 aaPredicted RBP19.5■□□□□ 0.71
HDLBP-240ENST00000484412 ABTB2Q8N961 1025 aa19.5■□□□□ 0.71
HDLBP-240ENST00000484412 TTC21BQ7Z4L5 1316 aa19.5■□□□□ 0.71
HDLBP-240ENST00000484412 PAK3O75914 559 aaPredicted RBP19.49■□□□□ 0.71
HDLBP-240ENST00000484412 HDGFL2Q7Z4V5 671 aaPredicted RBP19.49■□□□□ 0.71
HDLBP-240ENST00000484412 MEX3CQ5U5Q3 659 aaKnown RBP19.48■□□□□ 0.71
HDLBP-240ENST00000484412 USP19O94966 1318 aa19.48■□□□□ 0.71
HDLBP-240ENST00000484412 AKAP12Q02952 1782 aa19.47■□□□□ 0.71
HDLBP-240ENST00000484412 KTN1Q86UP2 1357 aaKnown RBP19.47■□□□□ 0.71
HDLBP-240ENST00000484412 TMC1Q8TDI8 760 aa19.47■□□□□ 0.71
HDLBP-240ENST00000484412 NGLY1Q96IV0 654 aa19.47■□□□□ 0.71
HDLBP-240ENST00000484412 USP31Q70CQ4 1352 aa19.46■□□□□ 0.71
HDLBP-240ENST00000484412 LMOD2Q6P5Q4 547 aa19.46■□□□□ 0.71
HDLBP-240ENST00000484412 CABLES1Q8TDN4 633 aa19.45■□□□□ 0.7
HDLBP-240ENST00000484412 ANKRD36BQ8N2N9 1353 aa19.44■□□□□ 0.7
HDLBP-240ENST00000484412 ADAMTS2O95450 1211 aa19.44■□□□□ 0.7
HDLBP-240ENST00000484412 NLRP6P59044 892 aa19.44■□□□□ 0.7
HDLBP-240ENST00000484412 MARF1Q9Y4F3 1742 aaKnown RBP19.44■□□□□ 0.7
HDLBP-240ENST00000484412 EDC4Q6P2E9 1401 aaKnown RBP19.43■□□□□ 0.7
HDLBP-240ENST00000484412 SLIT2O94813 1529 aa19.43■□□□□ 0.7
HDLBP-240ENST00000484412 FAM83GA6ND36 823 aa19.43■□□□□ 0.7
HDLBP-240ENST00000484412 GCP02774 474 aa19.43■□□□□ 0.7
HDLBP-240ENST00000484412 POTEAQ6S8J7 498 aa19.43■□□□□ 0.7
HDLBP-240ENST00000484412 AFF2P51816 1311 aa19.43■□□□□ 0.7
HDLBP-240ENST00000484412 KCNH5Q8NCM2 988 aa19.42■□□□□ 0.7
HDLBP-240ENST00000484412 C8orf37Q96NL8 207 aa19.42■□□□□ 0.7
HDLBP-240ENST00000484412 A0A1W2PP64 1363 aa19.42■□□□□ 0.7
HDLBP-240ENST00000484412 CPDO75976 1380 aa19.42■□□□□ 0.7
HDLBP-240ENST00000484412 MON2Q7Z3U7 1717 aa19.42■□□□□ 0.7
HDLBP-240ENST00000484412 CRYBG1Q9Y4K1 1723 aa19.42■□□□□ 0.7
HDLBP-240ENST00000484412 BCL9LQ86UU0 1499 aa19.41■□□□□ 0.7
HDLBP-240ENST00000484412 USP21Q9UK80 565 aa19.41■□□□□ 0.7
HDLBP-240ENST00000484412 C11orf95C9JLR9 678 aaPredicted RBP19.4■□□□□ 0.7
HDLBP-240ENST00000484412 UNC5CLQ8IV45 518 aa19.4■□□□□ 0.7
HDLBP-240ENST00000484412 QTRT2Q9H974 415 aaKnown RBP19.4■□□□□ 0.7
HDLBP-240ENST00000484412 TRPC5Q9UL62 973 aaPredicted RBP19.4■□□□□ 0.7
HDLBP-240ENST00000484412 HAP1P54257 671 aaPredicted RBP19.39■□□□□ 0.69
HDLBP-240ENST00000484412 NRKQ7Z2Y5 1582 aa19.38■□□□□ 0.69
HDLBP-240ENST00000484412 ABCA3Q99758 1704 aa19.37■□□□□ 0.69
HDLBP-240ENST00000484412 SLIT3O75094 1523 aa19.37■□□□□ 0.69
HDLBP-240ENST00000484412 ZEB1P37275 1124 aaPredicted RBP19.37■□□□□ 0.69
HDLBP-240ENST00000484412 RBM6P78332 1123 aaKnown RBP19.37■□□□□ 0.69
HDLBP-240ENST00000484412 ILDR2Q71H61 639 aa19.37■□□□□ 0.69
HDLBP-240ENST00000484412 USP54Q70EL1 1684 aa19.36■□□□□ 0.69
HDLBP-240ENST00000484412 FYB1O15117 783 aa19.36■□□□□ 0.69
HDLBP-240ENST00000484412 ONECUT3O60422 494 aaPredicted RBP19.36■□□□□ 0.69
HDLBP-240ENST00000484412 RXRBP28702 533 aa19.36■□□□□ 0.69
HDLBP-240ENST00000484412 CARD14Q9BXL6 1004 aa19.36■□□□□ 0.69
HDLBP-240ENST00000484412 NUTM2GQ5VZR2 741 aa19.35■□□□□ 0.69
HDLBP-240ENST00000484412 ARHGEF25Q86VW2 580 aa19.35■□□□□ 0.69
HDLBP-240ENST00000484412 CDK12Q9NYV4 1490 aaPredicted RBP19.35■□□□□ 0.69
HDLBP-240ENST00000484412 ATRNO75882 1429 aa19.34■□□□□ 0.69
HDLBP-240ENST00000484412 NWD2Q9ULI1 1742 aa19.34■□□□□ 0.69
HDLBP-240ENST00000484412 PIK3C2AO00443 1686 aa19.34■□□□□ 0.69
HDLBP-240ENST00000484412 VPS72Q15906 364 aa19.34■□□□□ 0.69
HDLBP-240ENST00000484412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.33■□□□□ 0.68
HDLBP-240ENST00000484412 GJD4Q96KN9 370 aaPredicted RBP19.33■□□□□ 0.68
HDLBP-240ENST00000484412 COL14A1Q05707 1796 aaKnown RBP19.33■□□□□ 0.68
HDLBP-240ENST00000484412 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.33■□□□□ 0.68
HDLBP-240ENST00000484412 PHRF1Q9P1Y6 1649 aaKnown RBP19.33■□□□□ 0.68
HDLBP-240ENST00000484412 AATKQ6ZMQ8 1374 aa19.32■□□□□ 0.68
HDLBP-240ENST00000484412 KIAA0232Q92628 1395 aa19.32■□□□□ 0.68
HDLBP-240ENST00000484412 ZC3H6P61129 1189 aaKnown RBP19.32■□□□□ 0.68
HDLBP-240ENST00000484412 NME9Q86XW9 330 aa19.32■□□□□ 0.68
HDLBP-240ENST00000484412 PRDM11Q9NQV5 511 aa19.32■□□□□ 0.68
HDLBP-240ENST00000484412 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
HDLBP-240ENST00000484412 OVOS2A0A0J9YW53 1432 aa19.3■□□□□ 0.68
HDLBP-240ENST00000484412 OVOS2Q6IE36 1432 aa19.3■□□□□ 0.68
HDLBP-240ENST00000484412 KIF7Q2M1P5 1343 aa19.29■□□□□ 0.68
HDLBP-240ENST00000484412 COG3Q96JB2 828 aa19.29■□□□□ 0.68
HDLBP-240ENST00000484412 MYOM1P52179 1685 aa19.29■□□□□ 0.68
HDLBP-240ENST00000484412 PER1O15534 1290 aaPredicted RBP19.28■□□□□ 0.68
HDLBP-240ENST00000484412 PANK3Q9H999 370 aa19.28■□□□□ 0.68
HDLBP-240ENST00000484412 ZRANB1Q9UGI0 708 aa19.28■□□□□ 0.68
HDLBP-240ENST00000484412 ABCC6O95255 1503 aa19.26■□□□□ 0.67
HDLBP-240ENST00000484412 CGNL1Q0VF96 1302 aa19.25■□□□□ 0.67
HDLBP-240ENST00000484412 COL18A1P39060 1754 aa19.25■□□□□ 0.67
HDLBP-240ENST00000484412 LMO7Q8WWI1 1683 aa19.25■□□□□ 0.67
HDLBP-240ENST00000484412 CAMTA1Q9Y6Y1 1673 aa19.25■□□□□ 0.67
HDLBP-240ENST00000484412 NFAT5O94916 1531 aa19.25■□□□□ 0.67
HDLBP-240ENST00000484412 SPATA31A5Q5VU36 1347 aa19.25■□□□□ 0.67
HDLBP-240ENST00000484412 WASHC2AQ641Q2 1341 aa19.25■□□□□ 0.67
HDLBP-240ENST00000484412 SPATA31A7Q8IWB4 1347 aa19.25■□□□□ 0.67
HDLBP-240ENST00000484412 CCDC7Q96M83 1385 aa19.24■□□□□ 0.67
HDLBP-240ENST00000484412 CHRNA2Q15822 529 aa19.24■□□□□ 0.67
HDLBP-240ENST00000484412 AXIN2Q9Y2T1 843 aa19.24■□□□□ 0.67
HDLBP-240ENST00000484412 THRAP3Q9Y2W1 955 aaKnown RBP19.24■□□□□ 0.67
HDLBP-240ENST00000484412 PLCH1Q4KWH8 1693 aa19.24■□□□□ 0.67
HDLBP-240ENST00000484412 KIF24Q5T7B8 1368 aa19.23■□□□□ 0.67
HDLBP-240ENST00000484412 SOCS7O14512 581 aa19.22■□□□□ 0.67
HDLBP-240ENST00000484412 PLEKHG5O94827 1062 aa19.22■□□□□ 0.67
HDLBP-240ENST00000484412 EVA1CP58658 441 aa19.22■□□□□ 0.67
HDLBP-240ENST00000484412 BARGINQ6ZT62 677 aa19.22■□□□□ 0.67
HDLBP-240ENST00000484412 IP6K1Q92551 441 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms