RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 HDGFL2Q7Z4V5 671 aaPredicted RBP9.65□□□□□ -0.86
SHROOM3-206ENST00000484236 CCDC146Q8IYE0 955 aa9.65□□□□□ -0.86
SHROOM3-206ENST00000484236 ADGRB2O60241 1585 aa9.65□□□□□ -0.86
SHROOM3-206ENST00000484236 UBR1Q8IWV7 1749 aa9.65□□□□□ -0.87
SHROOM3-206ENST00000484236 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.87
SHROOM3-206ENST00000484236 TCERG1O14776 1098 aaKnown RBP9.64□□□□□ -0.87
SHROOM3-206ENST00000484236 WDR63Q8IWG1 891 aa9.64□□□□□ -0.87
SHROOM3-206ENST00000484236 NLRP1Q9C000 1473 aa9.64□□□□□ -0.87
SHROOM3-206ENST00000484236 TNRQ92752 1358 aa9.63□□□□□ -0.87
SHROOM3-206ENST00000484236 MINK1Q8N4C8 1332 aaPredicted RBP9.63□□□□□ -0.87
SHROOM3-206ENST00000484236 CPS1P31327 1500 aa9.63□□□□□ -0.87
SHROOM3-206ENST00000484236 MS4A1P11836 297 aa9.63□□□□□ -0.87
SHROOM3-206ENST00000484236 WWC1Q8IX03 1113 aa9.63□□□□□ -0.87
SHROOM3-206ENST00000484236 CRBNQ96SW2 442 aa9.63□□□□□ -0.87
SHROOM3-206ENST00000484236 CDK19Q9BWU1 502 aa9.63□□□□□ -0.87
SHROOM3-206ENST00000484236 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
SHROOM3-206ENST00000484236 PNNQ9H307 717 aaKnown RBP9.62□□□□□ -0.87
SHROOM3-206ENST00000484236 CDC42BPGQ6DT37 1551 aa9.62□□□□□ -0.87
SHROOM3-206ENST00000484236 FYB1O15117 783 aa9.61□□□□□ -0.87
SHROOM3-206ENST00000484236 AAMPQ13685 434 aa9.61□□□□□ -0.87
SHROOM3-206ENST00000484236 SAFB2Q14151 953 aaKnown RBP eCLIP9.61□□□□□ -0.87
SHROOM3-206ENST00000484236 MLECQ14165 292 aa9.61□□□□□ -0.87
SHROOM3-206ENST00000484236 TCP11L2Q8N4U5 519 aa9.61□□□□□ -0.87
SHROOM3-206ENST00000484236 ANP32EQ9BTT0 268 aa9.61□□□□□ -0.87
SHROOM3-206ENST00000484236 CLEC11AQ9Y240 323 aa9.61□□□□□ -0.87
SHROOM3-206ENST00000484236 PNPLA6Q8IY17 1366 aa9.61□□□□□ -0.87
SHROOM3-206ENST00000484236 TMEM2Q9UHN6 1383 aa9.61□□□□□ -0.87
SHROOM3-206ENST00000484236 PLIN1O60240 522 aa9.6□□□□□ -0.87
SHROOM3-206ENST00000484236 CT47B1P0C2W7 299 aaPredicted RBP9.6□□□□□ -0.87
SHROOM3-206ENST00000484236 TNNT2P45379 298 aaPredicted RBP9.6□□□□□ -0.87
SHROOM3-206ENST00000484236 PDE3AQ14432 1141 aa9.6□□□□□ -0.87
SHROOM3-206ENST00000484236 AKAP12Q02952 1782 aa9.6□□□□□ -0.87
SHROOM3-206ENST00000484236 MON2Q7Z3U7 1717 aa9.59□□□□□ -0.87
SHROOM3-206ENST00000484236 CPSF1Q10570 1443 aaKnown RBP9.59□□□□□ -0.87
SHROOM3-206ENST00000484236 EDC4Q6P2E9 1401 aaKnown RBP9.59□□□□□ -0.87
SHROOM3-206ENST00000484236 WASLO00401 505 aaPredicted RBP9.59□□□□□ -0.87
SHROOM3-206ENST00000484236 CENPQQ7L2Z9 268 aaPredicted RBP9.59□□□□□ -0.87
SHROOM3-206ENST00000484236 MYH16Q9H6N6 1097 aa9.59□□□□□ -0.87
SHROOM3-206ENST00000484236 ITSN1Q15811 1721 aa9.59□□□□□ -0.87
SHROOM3-206ENST00000484236 U2AF1L5P0DN76 240 aaPredicted RBP9.58□□□□□ -0.88
SHROOM3-206ENST00000484236 U2AF1Q01081 240 aaKnown RBP eCLIP9.58□□□□□ -0.88
SHROOM3-206ENST00000484236 GGNBP2Q9H3C7 697 aa9.58□□□□□ -0.88
SHROOM3-206ENST00000484236 CABP1Q9NZU7 370 aa9.58□□□□□ -0.88
SHROOM3-206ENST00000484236 PLEKHG1Q9ULL1 1385 aa9.58□□□□□ -0.88
SHROOM3-206ENST00000484236 IL16Q14005 1332 aa9.57□□□□□ -0.88
SHROOM3-206ENST00000484236 KDM2BQ8NHM5 1336 aa9.57□□□□□ -0.88
SHROOM3-206ENST00000484236 DIAPH1O60610 1272 aaKnown RBP9.57□□□□□ -0.88
SHROOM3-206ENST00000484236 POTEIP0CG38 1075 aa9.57□□□□□ -0.88
SHROOM3-206ENST00000484236 C20orf194Q5TEA3 1177 aa9.57□□□□□ -0.88
SHROOM3-206ENST00000484236 METP08581 1390 aa9.57□□□□□ -0.88
SHROOM3-206ENST00000484236 PPIP5K1Q6PFW1 1433 aa9.56□□□□□ -0.88
SHROOM3-206ENST00000484236 MAP2P11137 1827 aaKnown RBP9.56□□□□□ -0.88
SHROOM3-206ENST00000484236 C3P01024 1663 aa9.56□□□□□ -0.88
SHROOM3-206ENST00000484236 AATKQ6ZMQ8 1374 aa9.56□□□□□ -0.88
SHROOM3-206ENST00000484236 WAPLQ7Z5K2 1190 aa9.56□□□□□ -0.88
SHROOM3-206ENST00000484236 PLEKHF1Q96S99 279 aa9.56□□□□□ -0.88
SHROOM3-206ENST00000484236 ZNF692Q9BU19 519 aaPredicted RBP9.56□□□□□ -0.88
SHROOM3-206ENST00000484236 SLIT1O75093 1534 aa9.56□□□□□ -0.88
SHROOM3-206ENST00000484236 ADAMTS13Q76LX8 1427 aa9.56□□□□□ -0.88
SHROOM3-206ENST00000484236 MAPK8IP3Q9UPT6 1336 aa9.56□□□□□ -0.88
SHROOM3-206ENST00000484236 FER1L4A9Z1Z3 1794 aa9.55□□□□□ -0.88
SHROOM3-206ENST00000484236 DIP2AQ14689 1571 aa9.55□□□□□ -0.88
SHROOM3-206ENST00000484236 CDK12Q9NYV4 1490 aaPredicted RBP9.55□□□□□ -0.88
SHROOM3-206ENST00000484236 ARHGAP23Q9P227 1491 aa9.55□□□□□ -0.88
SHROOM3-206ENST00000484236 FCHSD2O94868 740 aa9.55□□□□□ -0.88
SHROOM3-206ENST00000484236 ANP32AP39687 249 aaKnown RBP9.55□□□□□ -0.88
SHROOM3-206ENST00000484236 CCDC61Q9Y6R9 512 aa9.55□□□□□ -0.88
SHROOM3-206ENST00000484236 TOPAZ1Q8N9V7 1692 aa9.55□□□□□ -0.88
SHROOM3-206ENST00000484236 TMPOP42166 694 aaKnown RBP9.54□□□□□ -0.88
SHROOM3-206ENST00000484236 RARSP54136 660 aaKnown RBP9.54□□□□□ -0.88
SHROOM3-206ENST00000484236 NUDT16Q96DE0 195 aaKnown RBP9.54□□□□□ -0.88
SHROOM3-206ENST00000484236 U2SURPO15042 1029 aaKnown RBP9.53□□□□□ -0.88
SHROOM3-206ENST00000484236 BCAR3O75815 825 aa9.53□□□□□ -0.88
SHROOM3-206ENST00000484236 PDE4AP27815 886 aa9.53□□□□□ -0.88
SHROOM3-206ENST00000484236 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
SHROOM3-206ENST00000484236 TXNDC2Q86VQ3 553 aa9.53□□□□□ -0.88
SHROOM3-206ENST00000484236 BACH2Q9BYV9 841 aa9.53□□□□□ -0.88
SHROOM3-206ENST00000484236 RRP7AQ9Y3A4 280 aaKnown RBP9.53□□□□□ -0.88
SHROOM3-206ENST00000484236 EID1Q9Y6B2 187 aa9.53□□□□□ -0.88
SHROOM3-206ENST00000484236 NEFMP07197 916 aa9.52□□□□□ -0.89
SHROOM3-206ENST00000484236 CANXP27824 592 aaKnown RBP9.52□□□□□ -0.89
SHROOM3-206ENST00000484236 ERICH6Q7L0X2 663 aa9.52□□□□□ -0.89
SHROOM3-206ENST00000484236 POLKQ9UBT6 870 aa9.52□□□□□ -0.89
SHROOM3-206ENST00000484236 RIMS1Q86UR5 1692 aaKnown RBP9.51□□□□□ -0.89
SHROOM3-206ENST00000484236 LRRC7Q96NW7 1537 aa9.51□□□□□ -0.89
SHROOM3-206ENST00000484236 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.51□□□□□ -0.89
SHROOM3-206ENST00000484236 NRKQ7Z2Y5 1582 aa9.51□□□□□ -0.89
SHROOM3-206ENST00000484236 PTCH1Q13635 1447 aa9.51□□□□□ -0.89
SHROOM3-206ENST00000484236 CALD1Q05682 793 aaKnown RBP9.51□□□□□ -0.89
SHROOM3-206ENST00000484236 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
SHROOM3-206ENST00000484236 ZNF428Q96B54 188 aa9.51□□□□□ -0.89
SHROOM3-206ENST00000484236 COG3Q96JB2 828 aa9.51□□□□□ -0.89
SHROOM3-206ENST00000484236 TBX22Q9Y458 520 aa9.51□□□□□ -0.89
SHROOM3-206ENST00000484236 ROBO2Q9HCK4 1378 aa9.5□□□□□ -0.89
SHROOM3-206ENST00000484236 PLEKHG3A1L390 1219 aa9.5□□□□□ -0.89
SHROOM3-206ENST00000484236 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.5□□□□□ -0.89
SHROOM3-206ENST00000484236 THEMISQ8N1K5 641 aaPredicted RBP9.5□□□□□ -0.89
SHROOM3-206ENST00000484236 PMFBP1Q8TBY8 1022 aa9.5□□□□□ -0.89
SHROOM3-206ENST00000484236 CLUAP1Q96AJ1 413 aa9.5□□□□□ -0.89
SHROOM3-206ENST00000484236 IPO9Q96P70 1041 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms