RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 KIF2CQ99661 725 aa24.79■■□□□ 1.56
RPUSD3-216ENST00000484134 HSP90AA1P07900 732 aaKnown RBP24.79■■□□□ 1.56
RPUSD3-216ENST00000484134 ISY1Q9ULR0 285 aaKnown RBP24.79■■□□□ 1.56
RPUSD3-216ENST00000484134 INO80Q9ULG1 1556 aaPredicted RBP24.79■■□□□ 1.56
RPUSD3-216ENST00000484134 CD2BP2O95400 341 aaKnown RBP24.78■■□□□ 1.56
RPUSD3-216ENST00000484134 RAB3GAP1Q15042 981 aa24.77■■□□□ 1.56
RPUSD3-216ENST00000484134 ADGRB1O14514 1584 aa24.77■■□□□ 1.56
RPUSD3-216ENST00000484134 EFCAB6Q5THR3 1501 aa24.77■■□□□ 1.56
RPUSD3-216ENST00000484134 U2SURPO15042 1029 aaKnown RBP24.76■■□□□ 1.55
RPUSD3-216ENST00000484134 HSP90AA2PQ14568 343 aaPredicted RBP24.76■■□□□ 1.55
RPUSD3-216ENST00000484134 HSP90AB1P08238 724 aaKnown RBP24.75■■□□□ 1.55
RPUSD3-216ENST00000484134 FOXD4L1Q9NU39 408 aa24.75■■□□□ 1.55
RPUSD3-216ENST00000484134 CIZ1Q9ULV3 898 aaPredicted RBP24.75■■□□□ 1.55
RPUSD3-216ENST00000484134 PPRC1Q5VV67 1664 aaKnown RBP24.74■■□□□ 1.55
RPUSD3-216ENST00000484134 CHD1LQ86WJ1 897 aa24.74■■□□□ 1.55
RPUSD3-216ENST00000484134 ADGRB3O60242 1522 aa24.74■■□□□ 1.55
RPUSD3-216ENST00000484134 ARAP3Q8WWN8 1544 aa24.73■■□□□ 1.55
RPUSD3-216ENST00000484134 ANKRD36BQ8N2N9 1353 aa24.73■■□□□ 1.55
RPUSD3-216ENST00000484134 RRP9O43818 475 aaKnown RBP24.72■■□□□ 1.55
RPUSD3-216ENST00000484134 GBP4Q96PP9 640 aa24.72■■□□□ 1.55
RPUSD3-216ENST00000484134 RBM42Q9BTD8 480 aaKnown RBP24.71■■□□□ 1.55
RPUSD3-216ENST00000484134 CABP2Q9NPB3 220 aa24.71■■□□□ 1.55
RPUSD3-216ENST00000484134 NSD2O96028 1365 aa24.7■■□□□ 1.54
RPUSD3-216ENST00000484134 BMP2KLQ5H9B9 411 aa24.7■■□□□ 1.54
RPUSD3-216ENST00000484134 TRIM44Q96DX7 344 aaPredicted RBP24.7■■□□□ 1.54
RPUSD3-216ENST00000484134 UHRF1BP1LA0JNW5 1464 aa24.69■■□□□ 1.54
RPUSD3-216ENST00000484134 CFAP65Q6ZU64 1925 aaKnown RBP24.69■■□□□ 1.54
RPUSD3-216ENST00000484134 TULP4Q9NRJ4 1543 aa24.69■■□□□ 1.54
RPUSD3-216ENST00000484134 FANCAO15360 1455 aa24.69■■□□□ 1.54
RPUSD3-216ENST00000484134 ABCC11Q96J66 1382 aa24.69■■□□□ 1.54
RPUSD3-216ENST00000484134 GLIPR1L2Q4G1C9 344 aa24.69■■□□□ 1.54
RPUSD3-216ENST00000484134 IL16Q14005 1332 aa24.68■■□□□ 1.54
RPUSD3-216ENST00000484134 RIPK4P57078 832 aa24.68■■□□□ 1.54
RPUSD3-216ENST00000484134 SKOR2Q2VWA4 1001 aaPredicted RBP24.68■■□□□ 1.54
RPUSD3-216ENST00000484134 GGNBP2Q9H3C7 697 aa24.68■■□□□ 1.54
RPUSD3-216ENST00000484134 PPLO60437 1756 aa24.67■■□□□ 1.54
RPUSD3-216ENST00000484134 EVC2Q86UK5 1308 aa24.67■■□□□ 1.54
RPUSD3-216ENST00000484134 KIF16BQ96L93 1317 aa24.67■■□□□ 1.54
RPUSD3-216ENST00000484134 IPO8O15397 1037 aaKnown RBP24.67■■□□□ 1.54
RPUSD3-216ENST00000484134 VSIG10Q8N0Z9 540 aa24.67■■□□□ 1.54
RPUSD3-216ENST00000484134 COL3A1P02461 1466 aaPredicted RBP24.67■■□□□ 1.54
RPUSD3-216ENST00000484134 SSFA2P28290 1259 aa24.66■■□□□ 1.54
RPUSD3-216ENST00000484134 ANKRD45Q5TZF3 282 aa24.66■■□□□ 1.54
RPUSD3-216ENST00000484134 GAS2L2Q8NHY3 880 aa24.65■■□□□ 1.54
RPUSD3-216ENST00000484134 NUTM2DQ5VT03 806 aaPredicted RBP24.64■■□□□ 1.54
RPUSD3-216ENST00000484134 TBC1D9Q6ZT07 1266 aa24.64■■□□□ 1.54
RPUSD3-216ENST00000484134 K7ELQ4 463 aaPredicted RBP24.64■■□□□ 1.53
RPUSD3-216ENST00000484134 PUS7Q96PZ0 661 aaKnown RBP24.64■■□□□ 1.53
RPUSD3-216ENST00000484134 PPIP5K1Q6PFW1 1433 aa24.64■■□□□ 1.53
RPUSD3-216ENST00000484134 SAFB2Q14151 953 aaKnown RBP eCLIP24.63■■□□□ 1.53
RPUSD3-216ENST00000484134 C1orf115Q9H7X2 142 aa24.63■■□□□ 1.53
RPUSD3-216ENST00000484134 CFAP74Q9C0B2 1584 aa24.63■■□□□ 1.53
RPUSD3-216ENST00000484134 ABCA9Q8IUA7 1624 aa24.62■■□□□ 1.53
RPUSD3-216ENST00000484134 A0A1W2PP64 1363 aa24.62■■□□□ 1.53
RPUSD3-216ENST00000484134 ZBTB7BO15156 539 aaPredicted RBP24.62■■□□□ 1.53
RPUSD3-216ENST00000484134 ZMYND15Q9H091 742 aa24.61■■□□□ 1.53
RPUSD3-216ENST00000484134 ALDH1L2Q3SY69 923 aa24.61■■□□□ 1.53
RPUSD3-216ENST00000484134 LMTK2Q8IWU2 1503 aa24.61■■□□□ 1.53
RPUSD3-216ENST00000484134 PKNOX2Q96KN3 472 aa24.6■■□□□ 1.53
RPUSD3-216ENST00000484134 NPATQ14207 1427 aa24.6■■□□□ 1.53
RPUSD3-216ENST00000484134 PPP1R9BQ96SB3 815 aa24.6■■□□□ 1.53
RPUSD3-216ENST00000484134 GLI2P10070 1586 aa24.6■■□□□ 1.53
RPUSD3-216ENST00000484134 SIRT2Q8IXJ6 389 aa24.59■■□□□ 1.53
RPUSD3-216ENST00000484134 PTMSP20962 102 aa24.58■■□□□ 1.53
RPUSD3-216ENST00000484134 FYB1O15117 783 aa24.58■■□□□ 1.53
RPUSD3-216ENST00000484134 NASPP49321 788 aaPredicted RBP24.58■■□□□ 1.53
RPUSD3-216ENST00000484134 CLEC17AQ6ZS10 378 aa24.58■■□□□ 1.53
RPUSD3-216ENST00000484134 MED14O60244 1454 aa24.58■■□□□ 1.52
RPUSD3-216ENST00000484134 ARHGEF28Q8N1W1 1705 aaKnown RBP24.57■■□□□ 1.52
RPUSD3-216ENST00000484134 AK9Q5TCS8 1911 aa24.57■■□□□ 1.52
RPUSD3-216ENST00000484134 BAG4O95429 457 aaKnown RBP24.57■■□□□ 1.52
RPUSD3-216ENST00000484134 CCDC173Q0VFZ6 552 aa24.57■■□□□ 1.52
RPUSD3-216ENST00000484134 GCC1Q96CN9 775 aa24.57■■□□□ 1.52
RPUSD3-216ENST00000484134 KIDINS220Q9ULH0 1771 aa24.56■■□□□ 1.52
RPUSD3-216ENST00000484134 RPGRIP1LQ68CZ1 1315 aa24.55■■□□□ 1.52
RPUSD3-216ENST00000484134 KLHL40Q2TBA0 621 aa24.55■■□□□ 1.52
RPUSD3-216ENST00000484134 DDX49Q9Y6V7 483 aaKnown RBP24.55■■□□□ 1.52
RPUSD3-216ENST00000484134 DIAPH1O60610 1272 aaKnown RBP24.54■■□□□ 1.52
RPUSD3-216ENST00000484134 BRPF1P55201 1214 aaPredicted RBP24.54■■□□□ 1.52
RPUSD3-216ENST00000484134 TPM2P07951 284 aa24.53■■□□□ 1.52
RPUSD3-216ENST00000484134 KIAA1211Q6ZU35 1233 aa24.53■■□□□ 1.52
RPUSD3-216ENST00000484134 MRPL50Q8N5N7 158 aaKnown RBP24.53■■□□□ 1.52
RPUSD3-216ENST00000484134 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
RPUSD3-216ENST00000484134 ZSCAN30Q86W11 494 aa24.52■■□□□ 1.52
RPUSD3-216ENST00000484134 VAMP4O75379 141 aa24.52■■□□□ 1.52
RPUSD3-216ENST00000484134 SRPK2P78362 688 aaKnown RBP24.52■■□□□ 1.52
RPUSD3-216ENST00000484134 TSPYL6Q8N831 410 aa24.52■■□□□ 1.52
RPUSD3-216ENST00000484134 GGT6Q6P531 493 aa24.51■■□□□ 1.51
RPUSD3-216ENST00000484134 GOLGA6L22H0YM25 854 aa24.51■■□□□ 1.51
RPUSD3-216ENST00000484134 GSPT1P15170 499 aaKnown RBP24.51■■□□□ 1.51
RPUSD3-216ENST00000484134 THUMPD2Q9BTF0 503 aaKnown RBP24.51■■□□□ 1.51
RPUSD3-216ENST00000484134 CAMSAP1Q5T5Y3 1602 aa24.5■■□□□ 1.51
RPUSD3-216ENST00000484134 IBTKQ9P2D0 1353 aaPredicted RBP24.5■■□□□ 1.51
RPUSD3-216ENST00000484134 STK26Q9P289 416 aa24.5■■□□□ 1.51
RPUSD3-216ENST00000484134 PNPLA6Q8IY17 1366 aa24.49■■□□□ 1.51
RPUSD3-216ENST00000484134 PIK3R4Q99570 1358 aa24.49■■□□□ 1.51
RPUSD3-216ENST00000484134 CDC45O75419 566 aa24.49■■□□□ 1.51
RPUSD3-216ENST00000484134 ELL2O00472 640 aaPredicted RBP24.47■■□□□ 1.51
RPUSD3-216ENST00000484134 FBLN1P23142 703 aa24.47■■□□□ 1.51
RPUSD3-216ENST00000484134 PRKAR2BP31323 418 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms