RNA–Protein interactions for RNA: ENST00000484006.1

THUMPD3-209, Transcript of THUMP domain containing 3, humanhuman

TSL 4

Gene THUMPD3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-209ENST00000484006 LYPD8Q6UX82 237 aa9.82□□□□□ -0.84
THUMPD3-209ENST00000484006 HRCP23327 699 aa9.81□□□□□ -0.84
THUMPD3-209ENST00000484006 CTHP32929 405 aa9.81□□□□□ -0.84
THUMPD3-209ENST00000484006 PDE4DQ08499 809 aa9.81□□□□□ -0.84
THUMPD3-209ENST00000484006 KIFC2Q96AC6 838 aa9.81□□□□□ -0.84
THUMPD3-209ENST00000484006 PLEKHG3A1L390 1219 aa9.8□□□□□ -0.84
THUMPD3-209ENST00000484006 VARSP26640 1264 aaKnown RBP9.8□□□□□ -0.84
THUMPD3-209ENST00000484006 LINC01559Q495D7 138 aa9.8□□□□□ -0.84
THUMPD3-209ENST00000484006 ZNF511Q8NB15 262 aa9.8□□□□□ -0.84
THUMPD3-209ENST00000484006 TRIM47Q96LD4 638 aa9.8□□□□□ -0.84
THUMPD3-209ENST00000484006 WFS1O76024 890 aa9.79□□□□□ -0.84
THUMPD3-209ENST00000484006 BICRAQ9NZM4 1560 aa9.79□□□□□ -0.84
THUMPD3-209ENST00000484006 CFAP99D6REC4 459 aa9.78□□□□□ -0.84
THUMPD3-209ENST00000484006 SNRPBP14678 240 aaKnown RBP9.78□□□□□ -0.84
THUMPD3-209ENST00000484006 LCE2AQ5TA79 106 aaPredicted RBP9.78□□□□□ -0.84
THUMPD3-209ENST00000484006 MPNDQ8N594 471 aa9.78□□□□□ -0.84
THUMPD3-209ENST00000484006 SLC24A3Q9HC58 644 aa9.78□□□□□ -0.84
THUMPD3-209ENST00000484006 CAPN5O15484 640 aaPredicted RBP9.77□□□□□ -0.85
THUMPD3-209ENST00000484006 NUTM2BA6NNL0 878 aaPredicted RBP9.76□□□□□ -0.85
THUMPD3-209ENST00000484006 NUTM2EB1AL46 878 aaPredicted RBP9.76□□□□□ -0.85
THUMPD3-209ENST00000484006 CSPP1Q1MSJ5 1256 aa9.76□□□□□ -0.85
THUMPD3-209ENST00000484006 TUSC1Q2TAM9 212 aa9.76□□□□□ -0.85
THUMPD3-209ENST00000484006 NUTM2DQ5VT03 806 aaPredicted RBP9.76□□□□□ -0.85
THUMPD3-209ENST00000484006 NUTM2AQ8IVF1 878 aaPredicted RBP9.76□□□□□ -0.85
THUMPD3-209ENST00000484006 MYSM1Q5VVJ2 828 aa9.75□□□□□ -0.85
THUMPD3-209ENST00000484006 NFX1Q12986 1120 aaKnown RBP9.74□□□□□ -0.85
THUMPD3-209ENST00000484006 CABLES1Q8TDN4 633 aa9.74□□□□□ -0.85
THUMPD3-209ENST00000484006 F12P00748 615 aaPredicted RBP9.73□□□□□ -0.85
THUMPD3-209ENST00000484006 FAM174AQ8TBP5 190 aa9.73□□□□□ -0.85
THUMPD3-209ENST00000484006 TSC1Q92574 1164 aa9.73□□□□□ -0.85
THUMPD3-209ENST00000484006 RSPH6AQ9H0K4 717 aa9.72□□□□□ -0.85
THUMPD3-209ENST00000484006 MAP10Q9P2G4 905 aa9.72□□□□□ -0.85
THUMPD3-209ENST00000484006 LIMD1Q9UGP4 676 aa9.72□□□□□ -0.85
THUMPD3-209ENST00000484006 TLL2Q9Y6L7 1015 aa9.72□□□□□ -0.85
THUMPD3-209ENST00000484006 TERTO14746 1132 aaKnown RBP9.71□□□□□ -0.86
THUMPD3-209ENST00000484006 LILRB3O75022 631 aa9.71□□□□□ -0.86
THUMPD3-209ENST00000484006 NNTQ13423 1086 aa9.7□□□□□ -0.86
THUMPD3-209ENST00000484006 AGERQ15109 404 aa9.7□□□□□ -0.86
THUMPD3-209ENST00000484006 QPCTQ16769 361 aa9.7□□□□□ -0.86
THUMPD3-209ENST00000484006 ARMC2Q8NEN0 867 aa9.7□□□□□ -0.86
THUMPD3-209ENST00000484006 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
THUMPD3-209ENST00000484006 TRIM46Q7Z4K8 759 aa9.69□□□□□ -0.86
THUMPD3-209ENST00000484006 BPHLQ86WA6 291 aaPredicted RBP9.69□□□□□ -0.86
THUMPD3-209ENST00000484006 FOXJ1Q92949 421 aa9.69□□□□□ -0.86
THUMPD3-209ENST00000484006 BMP1P13497 986 aa9.68□□□□□ -0.86
THUMPD3-209ENST00000484006 ARID5BQ14865 1188 aa9.68□□□□□ -0.86
THUMPD3-209ENST00000484006 HELBQ8NG08 1087 aaPredicted RBP9.68□□□□□ -0.86
THUMPD3-209ENST00000484006 CDK15Q96Q40 435 aa9.68□□□□□ -0.86
THUMPD3-209ENST00000484006 ADH1CP00326 375 aa9.67□□□□□ -0.86
THUMPD3-209ENST00000484006 CLK2P49760 499 aaKnown RBP9.67□□□□□ -0.86
THUMPD3-209ENST00000484006 SLC16A10Q8TF71 515 aa9.67□□□□□ -0.86
THUMPD3-209ENST00000484006 WIPF1O43516 503 aa9.66□□□□□ -0.86
THUMPD3-209ENST00000484006 RTL5Q5HYW3 569 aaPredicted RBP9.66□□□□□ -0.86
THUMPD3-209ENST00000484006 NXF1Q9UBU9 619 aaKnown RBP9.66□□□□□ -0.86
THUMPD3-209ENST00000484006 WDR4P57081 412 aaKnown RBP9.65□□□□□ -0.86
THUMPD3-209ENST00000484006 INSM1Q01101 510 aaPredicted RBP9.65□□□□□ -0.86
THUMPD3-209ENST00000484006 NR5A1Q13285 461 aa9.65□□□□□ -0.86
THUMPD3-209ENST00000484006 ZFP42Q96MM3 310 aa9.65□□□□□ -0.86
THUMPD3-209ENST00000484006 POLR3EQ9NVU0 708 aa9.65□□□□□ -0.86
THUMPD3-209ENST00000484006 SCARF1Q14162 830 aa9.64□□□□□ -0.87
THUMPD3-209ENST00000484006 TIMP2P16035 220 aa9.63□□□□□ -0.87
THUMPD3-209ENST00000484006 NBPF14Q5TI25 921 aa9.63□□□□□ -0.87
THUMPD3-209ENST00000484006 MRPL14Q6P1L8 145 aaKnown RBP9.63□□□□□ -0.87
THUMPD3-209ENST00000484006 NPAS3Q8IXF0 933 aa9.63□□□□□ -0.87
THUMPD3-209ENST00000484006 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
THUMPD3-209ENST00000484006 KLF16Q9BXK1 252 aaPredicted RBP9.62□□□□□ -0.87
THUMPD3-209ENST00000484006 ZIC2O95409 532 aaPredicted RBP9.6□□□□□ -0.87
THUMPD3-209ENST00000484006 GRM5P41594 1212 aa9.6□□□□□ -0.87
THUMPD3-209ENST00000484006 SH3RF1Q7Z6J0 888 aa9.6□□□□□ -0.87
THUMPD3-209ENST00000484006 GPKOWQ92917 476 aaPredicted RBP eCLIP9.6□□□□□ -0.87
THUMPD3-209ENST00000484006 SKIV2LQ15477 1246 aaKnown RBP9.59□□□□□ -0.87
THUMPD3-209ENST00000484006 PURBQ96QR8 312 aaKnown RBP9.59□□□□□ -0.87
THUMPD3-209ENST00000484006 CECR2Q9BXF3 1484 aa9.59□□□□□ -0.87
THUMPD3-209ENST00000484006 CTDSPL2Q05D32 466 aa9.58□□□□□ -0.88
THUMPD3-209ENST00000484006 STK17AQ9UEE5 414 aa9.58□□□□□ -0.88
THUMPD3-209ENST00000484006 ATP1B4Q9UN42 357 aaPredicted RBP9.58□□□□□ -0.88
THUMPD3-209ENST00000484006 SH3BP5LQ7L8J4 393 aa9.57□□□□□ -0.88
THUMPD3-209ENST00000484006 IRF7Q92985 503 aa9.57□□□□□ -0.88
THUMPD3-209ENST00000484006 ITPKCQ96DU7 683 aa9.57□□□□□ -0.88
THUMPD3-209ENST00000484006 DDRGK1Q96HY6 314 aa9.57□□□□□ -0.88
THUMPD3-209ENST00000484006 C1QTNF2Q9BXJ5 285 aa9.57□□□□□ -0.88
THUMPD3-209ENST00000484006 MAP4K5Q9Y4K4 846 aa9.57□□□□□ -0.88
THUMPD3-209ENST00000484006 EIF4G1Q04637 1599 aaKnown RBP9.56□□□□□ -0.88
THUMPD3-209ENST00000484006 MAGEB6P1A0A0J9YX57 407 aa9.56□□□□□ -0.88
THUMPD3-209ENST00000484006 UPP2O95045 317 aa9.56□□□□□ -0.88
THUMPD3-209ENST00000484006 NR3C2P08235 984 aa9.56□□□□□ -0.88
THUMPD3-209ENST00000484006 LCE2CQ5TA81 110 aa9.56□□□□□ -0.88
THUMPD3-209ENST00000484006 VASH1Q7L8A9 365 aaPredicted RBP9.56□□□□□ -0.88
THUMPD3-209ENST00000484006 TRMT44Q8IYL2 757 aaKnown RBP9.56□□□□□ -0.88
THUMPD3-209ENST00000484006 BCANQ96GW7 911 aa9.56□□□□□ -0.88
THUMPD3-209ENST00000484006 ZFAND3Q9H8U3 227 aa9.56□□□□□ -0.88
THUMPD3-209ENST00000484006 KDM4CQ9H3R0 1056 aa9.55□□□□□ -0.88
THUMPD3-209ENST00000484006 SH3D19Q5HYK7 790 aa9.54□□□□□ -0.88
THUMPD3-209ENST00000484006 PDXDC2PQ6P474 469 aa9.54□□□□□ -0.88
THUMPD3-209ENST00000484006 H3BM21 787 aa9.53□□□□□ -0.88
THUMPD3-209ENST00000484006 EMILIN1Q9Y6C2 1016 aa9.53□□□□□ -0.88
THUMPD3-209ENST00000484006 FSHRP23945 695 aa9.52□□□□□ -0.89
THUMPD3-209ENST00000484006 VEGFBP49765 207 aa9.52□□□□□ -0.89
THUMPD3-209ENST00000484006 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
THUMPD3-209ENST00000484006 PPP2R2DQ66LE6 453 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms