RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 NSD3Q9BZ95 1437 aa12.37□□□□□ -0.43
SHROOM4-204ENST00000483955 ESCO1Q5FWF5 840 aa12.37□□□□□ -0.43
SHROOM4-204ENST00000483955 NGDNQ8NEJ9 315 aaKnown RBP12.37□□□□□ -0.43
SHROOM4-204ENST00000483955 USP6P35125 1406 aa12.37□□□□□ -0.43
SHROOM4-204ENST00000483955 ACEP12821 1306 aa12.37□□□□□ -0.43
SHROOM4-204ENST00000483955 NRKQ7Z2Y5 1582 aa12.36□□□□□ -0.43
SHROOM4-204ENST00000483955 KTN1Q86UP2 1357 aaKnown RBP12.36□□□□□ -0.43
SHROOM4-204ENST00000483955 DIEXFQ68CQ4 756 aaKnown RBP12.36□□□□□ -0.43
SHROOM4-204ENST00000483955 KNSTRNQ9Y448 316 aa12.36□□□□□ -0.43
SHROOM4-204ENST00000483955 PMFBP1Q8TBY8 1022 aa12.35□□□□□ -0.43
SHROOM4-204ENST00000483955 SLAIN2Q9P270 581 aa12.35□□□□□ -0.43
SHROOM4-204ENST00000483955 NSD2O96028 1365 aa12.34□□□□□ -0.43
SHROOM4-204ENST00000483955 NPC1L1Q9UHC9 1359 aa12.34□□□□□ -0.43
SHROOM4-204ENST00000483955 PER1O15534 1290 aaPredicted RBP12.34□□□□□ -0.43
SHROOM4-204ENST00000483955 TOM1O60784 492 aa12.34□□□□□ -0.43
SHROOM4-204ENST00000483955 CERKQ8TCT0 537 aa12.34□□□□□ -0.43
SHROOM4-204ENST00000483955 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
SHROOM4-204ENST00000483955 NPHP3Q7Z494 1330 aa12.34□□□□□ -0.43
SHROOM4-204ENST00000483955 ORAI2Q96SN7 254 aa12.33□□□□□ -0.44
SHROOM4-204ENST00000483955 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
SHROOM4-204ENST00000483955 TTC21AQ8NDW8 1320 aa12.33□□□□□ -0.44
SHROOM4-204ENST00000483955 BRINP3Q76B58 766 aa12.32□□□□□ -0.44
SHROOM4-204ENST00000483955 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
SHROOM4-204ENST00000483955 KIF20BQ96Q89 1820 aa12.32□□□□□ -0.44
SHROOM4-204ENST00000483955 ROBO1Q9Y6N7 1651 aa12.32□□□□□ -0.44
SHROOM4-204ENST00000483955 SSH2Q76I76 1423 aa12.31□□□□□ -0.44
SHROOM4-204ENST00000483955 ANP32CO43423 234 aa12.31□□□□□ -0.44
SHROOM4-204ENST00000483955 PSME1Q06323 249 aa12.31□□□□□ -0.44
SHROOM4-204ENST00000483955 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
SHROOM4-204ENST00000483955 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
SHROOM4-204ENST00000483955 ANKRD26Q9UPS8 1709 aa12.3□□□□□ -0.44
SHROOM4-204ENST00000483955 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
SHROOM4-204ENST00000483955 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
SHROOM4-204ENST00000483955 AHDC1Q5TGY3 1603 aaPredicted RBP12.29□□□□□ -0.44
SHROOM4-204ENST00000483955 TRPM3Q9HCF6 1732 aaPredicted RBP12.29□□□□□ -0.44
SHROOM4-204ENST00000483955 FOXO3O43524 673 aa12.29□□□□□ -0.44
SHROOM4-204ENST00000483955 PXDNQ92626 1479 aa12.28□□□□□ -0.44
SHROOM4-204ENST00000483955 UBAP1LF5GYI3 381 aa12.28□□□□□ -0.44
SHROOM4-204ENST00000483955 RALBP1Q15311 655 aa12.28□□□□□ -0.44
SHROOM4-204ENST00000483955 KRT28Q7Z3Y7 464 aa12.28□□□□□ -0.44
SHROOM4-204ENST00000483955 USP54Q70EL1 1684 aa12.28□□□□□ -0.44
SHROOM4-204ENST00000483955 PIK3C2AO00443 1686 aa12.27□□□□□ -0.45
SHROOM4-204ENST00000483955 CC2D1BQ5T0F9 858 aaKnown RBP12.27□□□□□ -0.45
SHROOM4-204ENST00000483955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.27□□□□□ -0.45
SHROOM4-204ENST00000483955 PARD3Q8TEW0 1356 aa12.27□□□□□ -0.45
SHROOM4-204ENST00000483955 OVOS2A0A0J9YW53 1432 aa12.27□□□□□ -0.45
SHROOM4-204ENST00000483955 TNS3Q68CZ2 1445 aa12.27□□□□□ -0.45
SHROOM4-204ENST00000483955 OVOS2Q6IE36 1432 aa12.27□□□□□ -0.45
SHROOM4-204ENST00000483955 FYB1O15117 783 aa12.26□□□□□ -0.45
SHROOM4-204ENST00000483955 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
SHROOM4-204ENST00000483955 SOS2Q07890 1332 aaPredicted RBP12.26□□□□□ -0.45
SHROOM4-204ENST00000483955 ARHGEF10O15013 1369 aa12.26□□□□□ -0.45
SHROOM4-204ENST00000483955 USP31Q70CQ4 1352 aa12.26□□□□□ -0.45
SHROOM4-204ENST00000483955 ALS2Q96Q42 1657 aa12.26□□□□□ -0.45
SHROOM4-204ENST00000483955 COG3Q96JB2 828 aa12.25□□□□□ -0.45
SHROOM4-204ENST00000483955 PRKRIP1Q9H875 184 aaPredicted RBP12.25□□□□□ -0.45
SHROOM4-204ENST00000483955 PIP4K2BP78356 416 aa12.24□□□□□ -0.45
SHROOM4-204ENST00000483955 NME9Q86XW9 330 aa12.24□□□□□ -0.45
SHROOM4-204ENST00000483955 ABTB2Q8N961 1025 aa12.24□□□□□ -0.45
SHROOM4-204ENST00000483955 GGNBP2Q9H3C7 697 aa12.24□□□□□ -0.45
SHROOM4-204ENST00000483955 PHLPP1O60346 1717 aa12.23□□□□□ -0.45
SHROOM4-204ENST00000483955 MED1Q15648 1581 aaPredicted RBP12.23□□□□□ -0.45
SHROOM4-204ENST00000483955 SPATA31A3Q5VYP0 1347 aa12.23□□□□□ -0.45
SHROOM4-204ENST00000483955 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
SHROOM4-204ENST00000483955 XPCQ01831 940 aaPredicted RBP12.23□□□□□ -0.45
SHROOM4-204ENST00000483955 MORC1Q86VD1 984 aa12.23□□□□□ -0.45
SHROOM4-204ENST00000483955 NLRP13Q86W25 1043 aa12.23□□□□□ -0.45
SHROOM4-204ENST00000483955 NLRP6P59044 892 aa12.22□□□□□ -0.45
SHROOM4-204ENST00000483955 DDX17Q92841 729 aaKnown RBP12.22□□□□□ -0.45
SHROOM4-204ENST00000483955 COL16A1Q07092 1604 aaPredicted RBP12.22□□□□□ -0.45
SHROOM4-204ENST00000483955 SLIT3O75094 1523 aa12.21□□□□□ -0.45
SHROOM4-204ENST00000483955 AATKQ6ZMQ8 1374 aa12.21□□□□□ -0.45
SHROOM4-204ENST00000483955 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.45
SHROOM4-204ENST00000483955 LRRC59Q96AG4 307 aaKnown RBP12.21□□□□□ -0.45
SHROOM4-204ENST00000483955 MARF1Q9Y4F3 1742 aaKnown RBP12.2□□□□□ -0.46
SHROOM4-204ENST00000483955 USP19O94966 1318 aa12.2□□□□□ -0.46
SHROOM4-204ENST00000483955 LMOD2Q6P5Q4 547 aa12.2□□□□□ -0.46
SHROOM4-204ENST00000483955 KCNH5Q8NCM2 988 aa12.2□□□□□ -0.46
SHROOM4-204ENST00000483955 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
SHROOM4-204ENST00000483955 CCER2I3L3R5 266 aa12.18□□□□□ -0.46
SHROOM4-204ENST00000483955 SP7Q8TDD2 431 aaPredicted RBP12.18□□□□□ -0.46
SHROOM4-204ENST00000483955 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
SHROOM4-204ENST00000483955 SMG6Q86US8 1419 aaKnown RBP12.18□□□□□ -0.46
SHROOM4-204ENST00000483955 COL22A1Q8NFW1 1626 aaPredicted RBP12.18□□□□□ -0.46
SHROOM4-204ENST00000483955 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
SHROOM4-204ENST00000483955 PRKCSHP14314 528 aaPredicted RBP12.17□□□□□ -0.46
SHROOM4-204ENST00000483955 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
SHROOM4-204ENST00000483955 NUTM2GQ5VZR2 741 aa12.17□□□□□ -0.46
SHROOM4-204ENST00000483955 MIER1Q8N108 512 aa12.17□□□□□ -0.46
SHROOM4-204ENST00000483955 KIF24Q5T7B8 1368 aa12.17□□□□□ -0.46
SHROOM4-204ENST00000483955 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
SHROOM4-204ENST00000483955 NFAT5O94916 1531 aa12.16□□□□□ -0.46
SHROOM4-204ENST00000483955 ZBTB22O15209 634 aa12.16□□□□□ -0.46
SHROOM4-204ENST00000483955 TNNT2P45379 298 aaPredicted RBP12.16□□□□□ -0.46
SHROOM4-204ENST00000483955 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
SHROOM4-204ENST00000483955 ABCA3Q99758 1704 aa12.16□□□□□ -0.46
SHROOM4-204ENST00000483955 SHPRHQ149N8 1683 aa12.16□□□□□ -0.46
SHROOM4-204ENST00000483955 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
SHROOM4-204ENST00000483955 ABCC6O95255 1503 aa12.15□□□□□ -0.46
SHROOM4-204ENST00000483955 RTL1A6NKG5 1358 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms