RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, humanhuman

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-208ENST00000482582 MYOM1P52179 1685 aa16.42■□□□□ 0.22
TRAIP-208ENST00000482582 KIF1AQ12756 1690 aa16.42■□□□□ 0.22
TRAIP-208ENST00000482582 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
TRAIP-208ENST00000482582 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
TRAIP-208ENST00000482582 ACEP12821 1306 aa16.41■□□□□ 0.22
TRAIP-208ENST00000482582 WASHC2AQ641Q2 1341 aa16.41■□□□□ 0.22
TRAIP-208ENST00000482582 FNBP4Q8N3X1 1017 aaPredicted RBP16.4■□□□□ 0.22
TRAIP-208ENST00000482582 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
TRAIP-208ENST00000482582 CCDC7Q96M83 1385 aa16.39■□□□□ 0.21
TRAIP-208ENST00000482582 AKAP12Q02952 1782 aa16.39■□□□□ 0.21
TRAIP-208ENST00000482582 NGDNQ8NEJ9 315 aaKnown RBP16.39■□□□□ 0.21
TRAIP-208ENST00000482582 CD163L1Q9NR16 1453 aa16.39■□□□□ 0.21
TRAIP-208ENST00000482582 BCL9LQ86UU0 1499 aa16.37■□□□□ 0.21
TRAIP-208ENST00000482582 PXDNQ92626 1479 aa16.37■□□□□ 0.21
TRAIP-208ENST00000482582 ATRNO75882 1429 aa16.36■□□□□ 0.21
TRAIP-208ENST00000482582 CPSF1Q10570 1443 aaKnown RBP16.36■□□□□ 0.21
TRAIP-208ENST00000482582 PSME1Q06323 249 aa16.36■□□□□ 0.21
TRAIP-208ENST00000482582 KRT28Q7Z3Y7 464 aa16.36■□□□□ 0.21
TRAIP-208ENST00000482582 TRPC5Q9UL62 973 aaPredicted RBP16.36■□□□□ 0.21
TRAIP-208ENST00000482582 NPHP3Q7Z494 1330 aa16.36■□□□□ 0.21
TRAIP-208ENST00000482582 TRPM3Q9HCF6 1732 aaPredicted RBP16.36■□□□□ 0.21
TRAIP-208ENST00000482582 EP400Q96L91 3159 aa16.35■□□□□ 0.21
TRAIP-208ENST00000482582 MON2Q7Z3U7 1717 aa16.34■□□□□ 0.21
TRAIP-208ENST00000482582 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
TRAIP-208ENST00000482582 A0A1W2PP64 1363 aa16.34■□□□□ 0.21
TRAIP-208ENST00000482582 NINLQ9Y2I6 1382 aa16.34■□□□□ 0.21
TRAIP-208ENST00000482582 USP6P35125 1406 aa16.33■□□□□ 0.2
TRAIP-208ENST00000482582 SSH2Q76I76 1423 aa16.32■□□□□ 0.2
TRAIP-208ENST00000482582 KTN1Q86UP2 1357 aaKnown RBP16.32■□□□□ 0.2
TRAIP-208ENST00000482582 ANKRD36BQ8N2N9 1353 aa16.32■□□□□ 0.2
TRAIP-208ENST00000482582 COL22A1Q8NFW1 1626 aaPredicted RBP16.32■□□□□ 0.2
TRAIP-208ENST00000482582 CARD14Q9BXL6 1004 aa16.32■□□□□ 0.2
TRAIP-208ENST00000482582 TERF2IPQ9NYB0 399 aa16.32■□□□□ 0.2
TRAIP-208ENST00000482582 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
TRAIP-208ENST00000482582 HDGFL2Q7Z4V5 671 aaPredicted RBP16.31■□□□□ 0.2
TRAIP-208ENST00000482582 ZNF692Q9BU19 519 aaPredicted RBP16.31■□□□□ 0.2
TRAIP-208ENST00000482582 NRKQ7Z2Y5 1582 aa16.3■□□□□ 0.2
TRAIP-208ENST00000482582 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
TRAIP-208ENST00000482582 GJD4Q96KN9 370 aaPredicted RBP16.3■□□□□ 0.2
TRAIP-208ENST00000482582 PANK3Q9H999 370 aa16.3■□□□□ 0.2
TRAIP-208ENST00000482582 ALS2Q96Q42 1657 aa16.3■□□□□ 0.2
TRAIP-208ENST00000482582 SBNO1A3KN83 1393 aa16.29■□□□□ 0.2
TRAIP-208ENST00000482582 SPATA31A3Q5VYP0 1347 aa16.29■□□□□ 0.2
TRAIP-208ENST00000482582 TTC21BQ7Z4L5 1316 aa16.29■□□□□ 0.2
TRAIP-208ENST00000482582 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
TRAIP-208ENST00000482582 DEFB132Q7Z7B7 95 aa16.27■□□□□ 0.2
TRAIP-208ENST00000482582 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.27■□□□□ 0.2
TRAIP-208ENST00000482582 TNS3Q68CZ2 1445 aa16.27■□□□□ 0.19
TRAIP-208ENST00000482582 EDC4Q6P2E9 1401 aaKnown RBP16.27■□□□□ 0.19
TRAIP-208ENST00000482582 GLI3P10071 1580 aa16.26■□□□□ 0.19
TRAIP-208ENST00000482582 NUTM2GQ5VZR2 741 aa16.26■□□□□ 0.19
TRAIP-208ENST00000482582 LMOD2Q6P5Q4 547 aa16.26■□□□□ 0.19
TRAIP-208ENST00000482582 ZRANB1Q9UGI0 708 aa16.26■□□□□ 0.19
TRAIP-208ENST00000482582 PIK3C2AO00443 1686 aa16.26■□□□□ 0.19
TRAIP-208ENST00000482582 NSD3Q9BZ95 1437 aa16.26■□□□□ 0.19
TRAIP-208ENST00000482582 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
TRAIP-208ENST00000482582 MARF1Q9Y4F3 1742 aaKnown RBP16.25■□□□□ 0.19
TRAIP-208ENST00000482582 PER1O15534 1290 aaPredicted RBP16.24■□□□□ 0.19
TRAIP-208ENST00000482582 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
TRAIP-208ENST00000482582 NME9Q86XW9 330 aa16.24■□□□□ 0.19
TRAIP-208ENST00000482582 TTC21AQ8NDW8 1320 aa16.23■□□□□ 0.19
TRAIP-208ENST00000482582 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
TRAIP-208ENST00000482582 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
TRAIP-208ENST00000482582 SLIT2O94813 1529 aa16.23■□□□□ 0.19
TRAIP-208ENST00000482582 BRWD3Q6RI45 1802 aa16.22■□□□□ 0.19
TRAIP-208ENST00000482582 FYB1O15117 783 aa16.22■□□□□ 0.19
TRAIP-208ENST00000482582 CRYBG1Q9Y4K1 1723 aa16.22■□□□□ 0.19
TRAIP-208ENST00000482582 KIF20BQ96Q89 1820 aa16.22■□□□□ 0.19
TRAIP-208ENST00000482582 ARHGEF10O15013 1369 aa16.21■□□□□ 0.19
TRAIP-208ENST00000482582 ABCA3Q99758 1704 aa16.2■□□□□ 0.18
TRAIP-208ENST00000482582 NLRP6P59044 892 aa16.2■□□□□ 0.18
TRAIP-208ENST00000482582 SEPT12Q8IYM1 358 aa16.2■□□□□ 0.18
TRAIP-208ENST00000482582 GGNBP2Q9H3C7 697 aa16.2■□□□□ 0.18
TRAIP-208ENST00000482582 USP54Q70EL1 1684 aa16.19■□□□□ 0.18
TRAIP-208ENST00000482582 FAM83GA6ND36 823 aa16.19■□□□□ 0.18
TRAIP-208ENST00000482582 USP31Q70CQ4 1352 aa16.18■□□□□ 0.18
TRAIP-208ENST00000482582 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
TRAIP-208ENST00000482582 NLRP13Q86W25 1043 aa16.18■□□□□ 0.18
TRAIP-208ENST00000482582 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
TRAIP-208ENST00000482582 USP19O94966 1318 aa16.18■□□□□ 0.18
TRAIP-208ENST00000482582 PHRF1Q9P1Y6 1649 aaKnown RBP16.17■□□□□ 0.18
TRAIP-208ENST00000482582 FAM182BQ5T319 152 aa16.17■□□□□ 0.18
TRAIP-208ENST00000482582 OVOS2A0A0J9YW53 1432 aa16.17■□□□□ 0.18
TRAIP-208ENST00000482582 OVOS2Q6IE36 1432 aa16.17■□□□□ 0.18
TRAIP-208ENST00000482582 CGNL1Q0VF96 1302 aa16.17■□□□□ 0.18
TRAIP-208ENST00000482582 FBLN1P23142 703 aa16.15■□□□□ 0.18
TRAIP-208ENST00000482582 CCDC125Q86Z20 511 aa16.15■□□□□ 0.18
TRAIP-208ENST00000482582 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.15■□□□□ 0.18
TRAIP-208ENST00000482582 ANKRD26Q9UPS8 1709 aa16.15■□□□□ 0.18
TRAIP-208ENST00000482582 SLIT3O75094 1523 aa16.14■□□□□ 0.18
TRAIP-208ENST00000482582 GCP02774 474 aa16.14■□□□□ 0.17
TRAIP-208ENST00000482582 VPS72Q15906 364 aa16.14■□□□□ 0.17
TRAIP-208ENST00000482582 COG3Q96JB2 828 aa16.14■□□□□ 0.17
TRAIP-208ENST00000482582 BLMP54132 1417 aaPredicted RBP16.13■□□□□ 0.17
TRAIP-208ENST00000482582 PSDA5PKW4 1024 aaPredicted RBP16.13■□□□□ 0.17
TRAIP-208ENST00000482582 SOX12O15370 315 aa16.13■□□□□ 0.17
TRAIP-208ENST00000482582 ONECUT3O60422 494 aaPredicted RBP16.13■□□□□ 0.17
TRAIP-208ENST00000482582 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
TRAIP-208ENST00000482582 CC2D1BQ5T0F9 858 aaKnown RBP16.13■□□□□ 0.17
TRAIP-208ENST00000482582 CCDC9Q9Y3X0 531 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms