RNA–Protein interactions for RNA: ENST00000481997.5

ARPC1B-217, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 945 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-217ENST00000481997 NSD3Q9BZ95 1437 aa20.39■□□□□ 0.85
ARPC1B-217ENST00000481997 NUTM2FA1L443 756 aa20.38■□□□□ 0.85
ARPC1B-217ENST00000481997 AMER1Q5JTC6 1135 aaPredicted RBP20.38■□□□□ 0.85
ARPC1B-217ENST00000481997 RALBP1Q15311 655 aa20.37■□□□□ 0.85
ARPC1B-217ENST00000481997 C19orf44Q9H6X5 657 aa20.37■□□□□ 0.85
ARPC1B-217ENST00000481997 QTRT2Q9H974 415 aaKnown RBP20.37■□□□□ 0.85
ARPC1B-217ENST00000481997 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
ARPC1B-217ENST00000481997 MON2Q7Z3U7 1717 aa20.36■□□□□ 0.85
ARPC1B-217ENST00000481997 PLEKHG3A1L390 1219 aa20.36■□□□□ 0.85
ARPC1B-217ENST00000481997 PARD3Q8TEW0 1356 aa20.35■□□□□ 0.85
ARPC1B-217ENST00000481997 CNGB1Q14028 1251 aaPredicted RBP20.35■□□□□ 0.85
ARPC1B-217ENST00000481997 CC2D1BQ5T0F9 858 aaKnown RBP20.35■□□□□ 0.85
ARPC1B-217ENST00000481997 DCCP43146 1447 aa20.35■□□□□ 0.85
ARPC1B-217ENST00000481997 CGNL1Q0VF96 1302 aa20.34■□□□□ 0.85
ARPC1B-217ENST00000481997 NGLY1Q96IV0 654 aa20.34■□□□□ 0.85
ARPC1B-217ENST00000481997 ZNF692Q9BU19 519 aaPredicted RBP20.32■□□□□ 0.84
ARPC1B-217ENST00000481997 SHPRHQ149N8 1683 aa20.32■□□□□ 0.84
ARPC1B-217ENST00000481997 KIF20BQ96Q89 1820 aa20.32■□□□□ 0.84
ARPC1B-217ENST00000481997 EDC4Q6P2E9 1401 aaKnown RBP20.31■□□□□ 0.84
ARPC1B-217ENST00000481997 NSD2O96028 1365 aa20.31■□□□□ 0.84
ARPC1B-217ENST00000481997 ACEP12821 1306 aa20.3■□□□□ 0.84
ARPC1B-217ENST00000481997 POLR3AO14802 1390 aaPredicted RBP20.3■□□□□ 0.84
ARPC1B-217ENST00000481997 ANKRD26Q9UPS8 1709 aa20.3■□□□□ 0.84
ARPC1B-217ENST00000481997 MYBBP1AQ9BQG0 1328 aaKnown RBP20.29■□□□□ 0.84
ARPC1B-217ENST00000481997 ATF3P18847 181 aa20.29■□□□□ 0.84
ARPC1B-217ENST00000481997 CCDC125Q86Z20 511 aa20.29■□□□□ 0.84
ARPC1B-217ENST00000481997 C8orf37Q96NL8 207 aa20.28■□□□□ 0.84
ARPC1B-217ENST00000481997 NRKQ7Z2Y5 1582 aa20.28■□□□□ 0.84
ARPC1B-217ENST00000481997 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.84
ARPC1B-217ENST00000481997 PMFBP1Q8TBY8 1022 aa20.27■□□□□ 0.84
ARPC1B-217ENST00000481997 USP6P35125 1406 aa20.27■□□□□ 0.83
ARPC1B-217ENST00000481997 C1orf167Q5SNV9 1468 aa20.26■□□□□ 0.83
ARPC1B-217ENST00000481997 NGDNQ8NEJ9 315 aaKnown RBP20.26■□□□□ 0.83
ARPC1B-217ENST00000481997 PHF8Q9UPP1 1060 aa20.26■□□□□ 0.83
ARPC1B-217ENST00000481997 MST1RQ04912 1400 aa20.26■□□□□ 0.83
ARPC1B-217ENST00000481997 KIF1AQ12756 1690 aa20.26■□□□□ 0.83
ARPC1B-217ENST00000481997 YTHDC1Q96MU7 727 aaKnown RBP20.25■□□□□ 0.83
ARPC1B-217ENST00000481997 FYB1O15117 783 aa20.24■□□□□ 0.83
ARPC1B-217ENST00000481997 ESCO1Q5FWF5 840 aa20.24■□□□□ 0.83
ARPC1B-217ENST00000481997 MORC1Q86VD1 984 aa20.23■□□□□ 0.83
ARPC1B-217ENST00000481997 NLRP13Q86W25 1043 aa20.23■□□□□ 0.83
ARPC1B-217ENST00000481997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
ARPC1B-217ENST00000481997 AHDC1Q5TGY3 1603 aaPredicted RBP20.23■□□□□ 0.83
ARPC1B-217ENST00000481997 SSH2Q76I76 1423 aa20.22■□□□□ 0.83
ARPC1B-217ENST00000481997 BRD4O60885 1362 aaPredicted RBP20.21■□□□□ 0.83
ARPC1B-217ENST00000481997 GGNBP2Q9H3C7 697 aa20.21■□□□□ 0.83
ARPC1B-217ENST00000481997 MRS2Q9HD23 443 aa20.21■□□□□ 0.83
ARPC1B-217ENST00000481997 TTC21BQ7Z4L5 1316 aa20.21■□□□□ 0.83
ARPC1B-217ENST00000481997 PPP2R1AP30153 589 aa20.2■□□□□ 0.82
ARPC1B-217ENST00000481997 CCDC184Q52MB2 194 aa20.2■□□□□ 0.82
ARPC1B-217ENST00000481997 ORAI2Q96SN7 254 aa20.2■□□□□ 0.82
ARPC1B-217ENST00000481997 TTC21AQ8NDW8 1320 aa20.19■□□□□ 0.82
ARPC1B-217ENST00000481997 NME9Q86XW9 330 aa20.18■□□□□ 0.82
ARPC1B-217ENST00000481997 PSME1Q06323 249 aa20.15■□□□□ 0.82
ARPC1B-217ENST00000481997 PIK3C2AO00443 1686 aa20.14■□□□□ 0.81
ARPC1B-217ENST00000481997 LRP5O75197 1615 aa20.14■□□□□ 0.81
ARPC1B-217ENST00000481997 IFFO2Q5TF58 517 aa20.14■□□□□ 0.81
ARPC1B-217ENST00000481997 COG3Q96JB2 828 aa20.14■□□□□ 0.81
ARPC1B-217ENST00000481997 FOXO3O43524 673 aa20.13■□□□□ 0.81
ARPC1B-217ENST00000481997 TNNT2P45379 298 aaPredicted RBP20.13■□□□□ 0.81
ARPC1B-217ENST00000481997 LRRC59Q96AG4 307 aaKnown RBP20.13■□□□□ 0.81
ARPC1B-217ENST00000481997 TRPC5Q9UL62 973 aaPredicted RBP20.13■□□□□ 0.81
ARPC1B-217ENST00000481997 USP54Q70EL1 1684 aa20.13■□□□□ 0.81
ARPC1B-217ENST00000481997 OVOS2A0A0J9YW53 1432 aa20.12■□□□□ 0.81
ARPC1B-217ENST00000481997 OVOS2Q6IE36 1432 aa20.12■□□□□ 0.81
ARPC1B-217ENST00000481997 USP31Q70CQ4 1352 aa20.12■□□□□ 0.81
ARPC1B-217ENST00000481997 MAP2P11137 1827 aaKnown RBP20.12■□□□□ 0.81
ARPC1B-217ENST00000481997 TRPM3Q9HCF6 1732 aaPredicted RBP20.12■□□□□ 0.81
ARPC1B-217ENST00000481997 YY1P25490 414 aa20.11■□□□□ 0.81
ARPC1B-217ENST00000481997 BRINP3Q76B58 766 aa20.11■□□□□ 0.81
ARPC1B-217ENST00000481997 USP21Q9UK80 565 aa20.1■□□□□ 0.81
ARPC1B-217ENST00000481997 PAK3O75914 559 aaPredicted RBP20.09■□□□□ 0.81
ARPC1B-217ENST00000481997 ADAMTS2O95450 1211 aa20.09■□□□□ 0.81
ARPC1B-217ENST00000481997 KRT28Q7Z3Y7 464 aa20.09■□□□□ 0.81
ARPC1B-217ENST00000481997 MARF1Q9Y4F3 1742 aaKnown RBP20.09■□□□□ 0.81
ARPC1B-217ENST00000481997 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.81
ARPC1B-217ENST00000481997 PNISRQ8TF01 805 aaKnown RBP20.08■□□□□ 0.81
ARPC1B-217ENST00000481997 AATKQ6ZMQ8 1374 aa20.08■□□□□ 0.8
ARPC1B-217ENST00000481997 MTHFSP49914 203 aa20.07■□□□□ 0.8
ARPC1B-217ENST00000481997 ABTB2Q8N961 1025 aa20.07■□□□□ 0.8
ARPC1B-217ENST00000481997 XPCQ01831 940 aaPredicted RBP20.06■□□□□ 0.8
ARPC1B-217ENST00000481997 SF3B2Q13435 895 aaKnown RBP20.06■□□□□ 0.8
ARPC1B-217ENST00000481997 FAM9BQ8IZU0 186 aa20.06■□□□□ 0.8
ARPC1B-217ENST00000481997 NLRP6P59044 892 aa20.05■□□□□ 0.8
ARPC1B-217ENST00000481997 ALS2Q96Q42 1657 aa20.05■□□□□ 0.8
ARPC1B-217ENST00000481997 PXDNQ92626 1479 aa20.05■□□□□ 0.8
ARPC1B-217ENST00000481997 CFAP53Q96M91 514 aa20.04■□□□□ 0.8
ARPC1B-217ENST00000481997 SBNO1A3KN83 1393 aa20.04■□□□□ 0.8
ARPC1B-217ENST00000481997 NHSL1Q5SYE7 1610 aa20.03■□□□□ 0.8
ARPC1B-217ENST00000481997 INSRP06213 1382 aa20.03■□□□□ 0.8
ARPC1B-217ENST00000481997 SMG6Q86US8 1419 aaKnown RBP20.02■□□□□ 0.8
ARPC1B-217ENST00000481997 DDX17Q92841 729 aaKnown RBP20.02■□□□□ 0.8
ARPC1B-217ENST00000481997 POLKQ9UBT6 870 aa20.02■□□□□ 0.8
ARPC1B-217ENST00000481997 BLMP54132 1417 aaPredicted RBP20.02■□□□□ 0.79
ARPC1B-217ENST00000481997 NUTM2GQ5VZR2 741 aa20.01■□□□□ 0.79
ARPC1B-217ENST00000481997 DEFB132Q7Z7B7 95 aa20.01■□□□□ 0.79
ARPC1B-217ENST00000481997 GTF3C3Q9Y5Q9 886 aa20.01■□□□□ 0.79
ARPC1B-217ENST00000481997 PNPLA6Q8IY17 1366 aa20■□□□□ 0.79
ARPC1B-217ENST00000481997 FBLN1P23142 703 aa20■□□□□ 0.79
ARPC1B-217ENST00000481997 TNS3Q68CZ2 1445 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms