RNA–Protein interactions for RNA: ENST00000481935.5

ABCD4-211, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-211ENST00000481935 MYBBP1AQ9BQG0 1328 aaKnown RBP16.9■□□□□ 0.3
ABCD4-211ENST00000481935 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.29
ABCD4-211ENST00000481935 CC2D1BQ5T0F9 858 aaKnown RBP16.89■□□□□ 0.29
ABCD4-211ENST00000481935 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
ABCD4-211ENST00000481935 RNF123Q5XPI4 1314 aa16.88■□□□□ 0.29
ABCD4-211ENST00000481935 NGDNQ8NEJ9 315 aaKnown RBP16.88■□□□□ 0.29
ABCD4-211ENST00000481935 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
ABCD4-211ENST00000481935 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
ABCD4-211ENST00000481935 CCDC61Q9Y6R9 512 aa16.87■□□□□ 0.29
ABCD4-211ENST00000481935 COL16A1Q07092 1604 aaPredicted RBP16.87■□□□□ 0.29
ABCD4-211ENST00000481935 PPIP5K1Q6PFW1 1433 aa16.87■□□□□ 0.29
ABCD4-211ENST00000481935 PSME1Q06323 249 aa16.87■□□□□ 0.29
ABCD4-211ENST00000481935 LMOD2Q6P5Q4 547 aa16.87■□□□□ 0.29
ABCD4-211ENST00000481935 ANKARQ7Z5J8 1434 aa16.86■□□□□ 0.29
ABCD4-211ENST00000481935 ACEP12821 1306 aa16.86■□□□□ 0.29
ABCD4-211ENST00000481935 SLC24A1O60721 1099 aa16.86■□□□□ 0.29
ABCD4-211ENST00000481935 KRT28Q7Z3Y7 464 aa16.85■□□□□ 0.29
ABCD4-211ENST00000481935 SLC12A5Q9H2X9 1139 aa16.85■□□□□ 0.29
ABCD4-211ENST00000481935 AHDC1Q5TGY3 1603 aaPredicted RBP16.85■□□□□ 0.29
ABCD4-211ENST00000481935 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
ABCD4-211ENST00000481935 PAK3O75914 559 aaPredicted RBP16.85■□□□□ 0.29
ABCD4-211ENST00000481935 PNISRQ8TF01 805 aaKnown RBP16.85■□□□□ 0.29
ABCD4-211ENST00000481935 TOPAZ1Q8N9V7 1692 aa16.84■□□□□ 0.29
ABCD4-211ENST00000481935 ITSN1Q15811 1721 aa16.84■□□□□ 0.29
ABCD4-211ENST00000481935 AMER1Q5JTC6 1135 aaPredicted RBP16.84■□□□□ 0.29
ABCD4-211ENST00000481935 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
ABCD4-211ENST00000481935 NUTM2GQ5VZR2 741 aa16.83■□□□□ 0.28
ABCD4-211ENST00000481935 PXDNQ92626 1479 aa16.83■□□□□ 0.28
ABCD4-211ENST00000481935 NUTM2BA6NNL0 878 aaPredicted RBP16.82■□□□□ 0.28
ABCD4-211ENST00000481935 NUTM2EB1AL46 878 aaPredicted RBP16.82■□□□□ 0.28
ABCD4-211ENST00000481935 NUTM2AQ8IVF1 878 aaPredicted RBP16.82■□□□□ 0.28
ABCD4-211ENST00000481935 KNSTRNQ9Y448 316 aa16.82■□□□□ 0.28
ABCD4-211ENST00000481935 SOS2Q07890 1332 aaPredicted RBP16.82■□□□□ 0.28
ABCD4-211ENST00000481935 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
ABCD4-211ENST00000481935 KIF1AQ12756 1690 aa16.82■□□□□ 0.28
ABCD4-211ENST00000481935 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
ABCD4-211ENST00000481935 CCDC136Q96JN2 1154 aa16.81■□□□□ 0.28
ABCD4-211ENST00000481935 CABLES1Q8TDN4 633 aa16.81■□□□□ 0.28
ABCD4-211ENST00000481935 LRRC59Q96AG4 307 aaKnown RBP16.8■□□□□ 0.28
ABCD4-211ENST00000481935 INSRP06213 1382 aa16.8■□□□□ 0.28
ABCD4-211ENST00000481935 PLEKHG3A1L390 1219 aa16.78■□□□□ 0.28
ABCD4-211ENST00000481935 NOP58Q9Y2X3 529 aaKnown RBP16.78■□□□□ 0.28
ABCD4-211ENST00000481935 ATAD2Q6PL18 1390 aa16.78■□□□□ 0.28
ABCD4-211ENST00000481935 POLR3AO14802 1390 aaPredicted RBP16.77■□□□□ 0.27
ABCD4-211ENST00000481935 JCADQ9P266 1359 aa16.77■□□□□ 0.27
ABCD4-211ENST00000481935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.76■□□□□ 0.27
ABCD4-211ENST00000481935 PNPLA6Q8IY17 1366 aa16.76■□□□□ 0.27
ABCD4-211ENST00000481935 SPATA31A3Q5VYP0 1347 aa16.76■□□□□ 0.27
ABCD4-211ENST00000481935 ADAMTS2O95450 1211 aa16.76■□□□□ 0.27
ABCD4-211ENST00000481935 TRPM3Q9HCF6 1732 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-211ENST00000481935 NSD3Q9BZ95 1437 aa16.75■□□□□ 0.27
ABCD4-211ENST00000481935 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
ABCD4-211ENST00000481935 CD163L1Q9NR16 1453 aa16.75■□□□□ 0.27
ABCD4-211ENST00000481935 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
ABCD4-211ENST00000481935 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
ABCD4-211ENST00000481935 TNS3Q68CZ2 1445 aa16.74■□□□□ 0.27
ABCD4-211ENST00000481935 LRP6O75581 1613 aa16.73■□□□□ 0.27
ABCD4-211ENST00000481935 ANP32AP39687 249 aaKnown RBP16.73■□□□□ 0.27
ABCD4-211ENST00000481935 ABTB2Q8N961 1025 aa16.73■□□□□ 0.27
ABCD4-211ENST00000481935 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
ABCD4-211ENST00000481935 NPC1L1Q9UHC9 1359 aa16.73■□□□□ 0.27
ABCD4-211ENST00000481935 USP6P35125 1406 aa16.73■□□□□ 0.27
ABCD4-211ENST00000481935 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
ABCD4-211ENST00000481935 SOX12O15370 315 aa16.72■□□□□ 0.27
ABCD4-211ENST00000481935 PPP2R1AP30153 589 aa16.72■□□□□ 0.27
ABCD4-211ENST00000481935 AKAP12Q02952 1782 aa16.72■□□□□ 0.27
ABCD4-211ENST00000481935 ANKRD36BQ8N2N9 1353 aa16.71■□□□□ 0.27
ABCD4-211ENST00000481935 BLMP54132 1417 aaPredicted RBP16.71■□□□□ 0.27
ABCD4-211ENST00000481935 CPSF1Q10570 1443 aaKnown RBP16.71■□□□□ 0.27
ABCD4-211ENST00000481935 ALS2Q96Q42 1657 aa16.71■□□□□ 0.26
ABCD4-211ENST00000481935 HAP1P54257 671 aaPredicted RBP16.7■□□□□ 0.26
ABCD4-211ENST00000481935 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
ABCD4-211ENST00000481935 IPO9Q96P70 1041 aaKnown RBP16.69■□□□□ 0.26
ABCD4-211ENST00000481935 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
ABCD4-211ENST00000481935 MED1Q15648 1581 aaPredicted RBP16.69■□□□□ 0.26
ABCD4-211ENST00000481935 MEX3CQ5U5Q3 659 aaKnown RBP16.69■□□□□ 0.26
ABCD4-211ENST00000481935 NME9Q86XW9 330 aa16.69■□□□□ 0.26
ABCD4-211ENST00000481935 C8orf37Q96NL8 207 aa16.69■□□□□ 0.26
ABCD4-211ENST00000481935 TERF2IPQ9NYB0 399 aa16.69■□□□□ 0.26
ABCD4-211ENST00000481935 TTC21BQ7Z4L5 1316 aa16.69■□□□□ 0.26
ABCD4-211ENST00000481935 MON2Q7Z3U7 1717 aa16.68■□□□□ 0.26
ABCD4-211ENST00000481935 NLRP6P59044 892 aa16.68■□□□□ 0.26
ABCD4-211ENST00000481935 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
ABCD4-211ENST00000481935 PIK3C2AO00443 1686 aa16.67■□□□□ 0.26
ABCD4-211ENST00000481935 PDE3BQ13370 1112 aa16.67■□□□□ 0.26
ABCD4-211ENST00000481935 SSH2Q76I76 1423 aa16.66■□□□□ 0.26
ABCD4-211ENST00000481935 EP400Q96L91 3159 aa16.66■□□□□ 0.26
ABCD4-211ENST00000481935 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
ABCD4-211ENST00000481935 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
ABCD4-211ENST00000481935 SPATA31A6Q5VVP1 1343 aa16.66■□□□□ 0.26
ABCD4-211ENST00000481935 NRKQ7Z2Y5 1582 aa16.66■□□□□ 0.26
ABCD4-211ENST00000481935 FBLN1P23142 703 aa16.65■□□□□ 0.26
ABCD4-211ENST00000481935 DEKP35659 375 aaKnown RBP16.65■□□□□ 0.26
ABCD4-211ENST00000481935 ZC3H6P61129 1189 aaKnown RBP16.65■□□□□ 0.26
ABCD4-211ENST00000481935 ARHGEF10O15013 1369 aa16.65■□□□□ 0.26
ABCD4-211ENST00000481935 NINLQ9Y2I6 1382 aa16.65■□□□□ 0.26
ABCD4-211ENST00000481935 TNNT2P45379 298 aaPredicted RBP16.64■□□□□ 0.25
ABCD4-211ENST00000481935 ABCA3Q99758 1704 aa16.64■□□□□ 0.25
ABCD4-211ENST00000481935 COL22A1Q8NFW1 1626 aaPredicted RBP16.64■□□□□ 0.25
ABCD4-211ENST00000481935 CGNL1Q0VF96 1302 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms