RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 CLUAP1Q96AJ1 413 aa22.09■■□□□ 1.13
PKD1-213ENST00000480227 KIF20BQ96Q89 1820 aa22.09■■□□□ 1.13
PKD1-213ENST00000480227 RLBP1P12271 317 aa22.09■■□□□ 1.13
PKD1-213ENST00000480227 FBLN1P23142 703 aa22.08■■□□□ 1.13
PKD1-213ENST00000480227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.08■■□□□ 1.13
PKD1-213ENST00000480227 TSR2Q969E8 191 aaKnown RBP22.08■■□□□ 1.13
PKD1-213ENST00000480227 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
PKD1-213ENST00000480227 MED14O60244 1454 aa22.07■■□□□ 1.12
PKD1-213ENST00000480227 MYH16Q9H6N6 1097 aa22.07■■□□□ 1.12
PKD1-213ENST00000480227 TMPOP42166 694 aaKnown RBP22.06■■□□□ 1.12
PKD1-213ENST00000480227 DDRGK1Q96HY6 314 aa22.04■■□□□ 1.12
PKD1-213ENST00000480227 TRIM35Q9UPQ4 493 aa22.04■■□□□ 1.12
PKD1-213ENST00000480227 MAPK8IP3Q9UPT6 1336 aa22.04■■□□□ 1.12
PKD1-213ENST00000480227 DLC1Q96QB1 1528 aa22.03■■□□□ 1.12
PKD1-213ENST00000480227 DIAPH1O60610 1272 aaKnown RBP22.03■■□□□ 1.12
PKD1-213ENST00000480227 NRXN3Q9Y4C0 1643 aa22.03■■□□□ 1.12
PKD1-213ENST00000480227 NCBP3Q53F19 620 aaKnown RBP22.03■■□□□ 1.12
PKD1-213ENST00000480227 PPM1GO15355 546 aaPredicted RBP22.02■■□□□ 1.12
PKD1-213ENST00000480227 KIF13AQ9H1H9 1805 aa22.02■■□□□ 1.12
PKD1-213ENST00000480227 METP08581 1390 aa22.01■■□□□ 1.11
PKD1-213ENST00000480227 SLC4A3P48751 1232 aa22.01■■□□□ 1.11
PKD1-213ENST00000480227 BCL11AQ9H165 835 aa22.01■■□□□ 1.11
PKD1-213ENST00000480227 MAP2P11137 1827 aaKnown RBP22■■□□□ 1.11
PKD1-213ENST00000480227 PNPLA6Q8IY17 1366 aa22■■□□□ 1.11
PKD1-213ENST00000480227 EXOSC9Q06265 439 aaKnown RBP22■■□□□ 1.11
PKD1-213ENST00000480227 PCDHB15Q9Y5E8 787 aa22■■□□□ 1.11
PKD1-213ENST00000480227 TXNDC2Q86VQ3 553 aa21.99■■□□□ 1.11
PKD1-213ENST00000480227 ZMYM3Q14202 1370 aa21.99■■□□□ 1.11
PKD1-213ENST00000480227 RIPK4P57078 832 aa21.99■■□□□ 1.11
PKD1-213ENST00000480227 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
PKD1-213ENST00000480227 ATP7BP35670 1465 aa21.98■■□□□ 1.11
PKD1-213ENST00000480227 POLKQ9UBT6 870 aa21.97■■□□□ 1.11
PKD1-213ENST00000480227 NCKAP5LQ9HCH0 1330 aa21.97■■□□□ 1.11
PKD1-213ENST00000480227 NEFMP07197 916 aa21.97■■□□□ 1.11
PKD1-213ENST00000480227 WASLO00401 505 aaPredicted RBP21.96■■□□□ 1.11
PKD1-213ENST00000480227 LRRC7Q96NW7 1537 aa21.95■■□□□ 1.1
PKD1-213ENST00000480227 DAXXQ9UER7 740 aaPredicted RBP21.95■■□□□ 1.1
PKD1-213ENST00000480227 PPIP5K1Q6PFW1 1433 aa21.95■■□□□ 1.1
PKD1-213ENST00000480227 SMC4Q9NTJ3 1288 aa21.95■■□□□ 1.1
PKD1-213ENST00000480227 ZRANB1Q9UGI0 708 aa21.95■■□□□ 1.1
PKD1-213ENST00000480227 ZKSCAN2Q63HK3 967 aa21.94■■□□□ 1.1
PKD1-213ENST00000480227 NME9Q86XW9 330 aa21.94■■□□□ 1.1
PKD1-213ENST00000480227 VIRMAQ69YN4 1812 aaKnown RBP21.94■■□□□ 1.1
PKD1-213ENST00000480227 PMFBP1Q8TBY8 1022 aa21.93■■□□□ 1.1
PKD1-213ENST00000480227 SSH1Q8WYL5 1049 aa21.93■■□□□ 1.1
PKD1-213ENST00000480227 EMILIN1Q9Y6C2 1016 aa21.93■■□□□ 1.1
PKD1-213ENST00000480227 PRKAR2BP31323 418 aa21.92■■□□□ 1.1
PKD1-213ENST00000480227 MVPQ14764 893 aaKnown RBP21.92■■□□□ 1.1
PKD1-213ENST00000480227 FTSJ3Q8IY81 847 aaKnown RBP21.92■■□□□ 1.1
PKD1-213ENST00000480227 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.92■■□□□ 1.1
PKD1-213ENST00000480227 CPSF1Q10570 1443 aaKnown RBP21.92■■□□□ 1.1
PKD1-213ENST00000480227 HMOX1P09601 288 aa21.91■■□□□ 1.1
PKD1-213ENST00000480227 RSPH6AQ9H0K4 717 aa21.91■■□□□ 1.1
PKD1-213ENST00000480227 FCHSD2O94868 740 aa21.91■■□□□ 1.1
PKD1-213ENST00000480227 CT47B1P0C2W7 299 aaPredicted RBP21.91■■□□□ 1.1
PKD1-213ENST00000480227 DZIP1LQ8IYY4 767 aaKnown RBP21.91■■□□□ 1.1
PKD1-213ENST00000480227 NUDT16Q96DE0 195 aaKnown RBP21.9■■□□□ 1.1
PKD1-213ENST00000480227 CDC42BPGQ6DT37 1551 aa21.9■■□□□ 1.1
PKD1-213ENST00000480227 TRIM27P14373 513 aa21.9■■□□□ 1.1
PKD1-213ENST00000480227 IL16Q14005 1332 aa21.89■■□□□ 1.1
PKD1-213ENST00000480227 AAMPQ13685 434 aa21.89■■□□□ 1.1
PKD1-213ENST00000480227 EDC4Q6P2E9 1401 aaKnown RBP21.89■■□□□ 1.09
PKD1-213ENST00000480227 PHACTR3Q96KR7 559 aa21.89■■□□□ 1.09
PKD1-213ENST00000480227 PNNQ9H307 717 aaKnown RBP21.89■■□□□ 1.09
PKD1-213ENST00000480227 FAM135BQ49AJ0 1406 aa21.88■■□□□ 1.09
PKD1-213ENST00000480227 TNRQ92752 1358 aa21.88■■□□□ 1.09
PKD1-213ENST00000480227 CPS1P31327 1500 aa21.87■■□□□ 1.09
PKD1-213ENST00000480227 SEC24BO95487 1268 aa21.87■■□□□ 1.09
PKD1-213ENST00000480227 NOB1Q9ULX3 412 aaKnown RBP21.87■■□□□ 1.09
PKD1-213ENST00000480227 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
PKD1-213ENST00000480227 KNDC1Q76NI1 1749 aa21.86■■□□□ 1.09
PKD1-213ENST00000480227 RWDD1Q9H446 243 aaPredicted RBP21.86■■□□□ 1.09
PKD1-213ENST00000480227 THUMPD2Q9BTF0 503 aaKnown RBP21.85■■□□□ 1.09
PKD1-213ENST00000480227 CCDC61Q9Y6R9 512 aa21.85■■□□□ 1.09
PKD1-213ENST00000480227 UBR1Q8IWV7 1749 aa21.85■■□□□ 1.09
PKD1-213ENST00000480227 RRS1Q15050 365 aaKnown RBP21.85■■□□□ 1.09
PKD1-213ENST00000480227 ATF7IPQ6VMQ6 1270 aa21.84■■□□□ 1.09
PKD1-213ENST00000480227 ITPRIPQ8IWB1 547 aa21.84■■□□□ 1.09
PKD1-213ENST00000480227 USP35Q9P2H5 1018 aa21.84■■□□□ 1.09
PKD1-213ENST00000480227 MON2Q7Z3U7 1717 aa21.84■■□□□ 1.09
PKD1-213ENST00000480227 PRR36Q9H6K5 1346 aa21.84■■□□□ 1.09
PKD1-213ENST00000480227 TMEM2Q9UHN6 1383 aa21.83■■□□□ 1.09
PKD1-213ENST00000480227 IL13P35225 146 aa21.83■■□□□ 1.09
PKD1-213ENST00000480227 TECPR2O15040 1411 aa21.83■■□□□ 1.09
PKD1-213ENST00000480227 HDGFP51858 240 aaKnown RBP21.83■■□□□ 1.08
PKD1-213ENST00000480227 USP19O94966 1318 aa21.83■■□□□ 1.08
PKD1-213ENST00000480227 ROBO2Q9HCK4 1378 aa21.82■■□□□ 1.08
PKD1-213ENST00000480227 COG3Q96JB2 828 aa21.82■■□□□ 1.08
PKD1-213ENST00000480227 ITSN1Q15811 1721 aa21.82■■□□□ 1.08
PKD1-213ENST00000480227 AKAP12Q02952 1782 aa21.81■■□□□ 1.08
PKD1-213ENST00000480227 TRHP20396 242 aaPredicted RBP21.81■■□□□ 1.08
PKD1-213ENST00000480227 NFE2L2Q16236 605 aa21.81■■□□□ 1.08
PKD1-213ENST00000480227 NUTM2FA1L443 756 aa21.81■■□□□ 1.08
PKD1-213ENST00000480227 TMEM57Q8N5G2 664 aa21.81■■□□□ 1.08
PKD1-213ENST00000480227 CDK12Q9NYV4 1490 aaPredicted RBP21.8■■□□□ 1.08
PKD1-213ENST00000480227 DLG5Q8TDM6 1919 aa21.8■■□□□ 1.08
PKD1-213ENST00000480227 C3P01024 1663 aa21.79■■□□□ 1.08
PKD1-213ENST00000480227 DDX19BQ9UMR2 479 aa21.79■■□□□ 1.08
PKD1-213ENST00000480227 ADAMTS13Q76LX8 1427 aa21.79■■□□□ 1.08
PKD1-213ENST00000480227 LTKP29376 864 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms