RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 SSH2Q76I76 1423 aa14.64□□□□□ -0.07
VTI1A-204ENST00000480057 ACEP12821 1306 aa14.64□□□□□ -0.07
VTI1A-204ENST00000480057 TTC21AQ8NDW8 1320 aa14.64□□□□□ -0.07
VTI1A-204ENST00000480057 COL3A1P02461 1466 aaPredicted RBP14.63□□□□□ -0.07
VTI1A-204ENST00000480057 NCKAP5LQ9HCH0 1330 aa14.63□□□□□ -0.07
VTI1A-204ENST00000480057 NEFLP07196 543 aa14.62□□□□□ -0.07
VTI1A-204ENST00000480057 NCOA3Q9Y6Q9 1424 aa14.62□□□□□ -0.07
VTI1A-204ENST00000480057 TNNT2P45379 298 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-204ENST00000480057 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.61□□□□□ -0.07
VTI1A-204ENST00000480057 TTC21BQ7Z4L5 1316 aa14.61□□□□□ -0.07
VTI1A-204ENST00000480057 LRRC7Q96NW7 1537 aa14.61□□□□□ -0.07
VTI1A-204ENST00000480057 OVOS2A0A0J9YW53 1432 aa14.6□□□□□ -0.07
VTI1A-204ENST00000480057 OVOS2Q6IE36 1432 aa14.6□□□□□ -0.07
VTI1A-204ENST00000480057 COG3Q96JB2 828 aa14.6□□□□□ -0.07
VTI1A-204ENST00000480057 CDK12Q9NYV4 1490 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-204ENST00000480057 USP54Q70EL1 1684 aa14.6□□□□□ -0.07
VTI1A-204ENST00000480057 RGPD8O14715 1765 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-204ENST00000480057 KDM4FA0A1W2PPD8 638 aa14.59□□□□□ -0.07
VTI1A-204ENST00000480057 ZNF521Q96K83 1311 aa14.59□□□□□ -0.07
VTI1A-204ENST00000480057 USP31Q70CQ4 1352 aa14.59□□□□□ -0.07
VTI1A-204ENST00000480057 ERICH6BQ5W0A0 696 aa14.58□□□□□ -0.08
VTI1A-204ENST00000480057 NME9Q86XW9 330 aa14.58□□□□□ -0.08
VTI1A-204ENST00000480057 RUNDC1Q96C34 613 aa14.58□□□□□ -0.08
VTI1A-204ENST00000480057 IQSEC2Q5JU85 1478 aa14.57□□□□□ -0.08
VTI1A-204ENST00000480057 LMTK3Q96Q04 1460 aa14.57□□□□□ -0.08
VTI1A-204ENST00000480057 MAP2P11137 1827 aaKnown RBP14.57□□□□□ -0.08
VTI1A-204ENST00000480057 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
VTI1A-204ENST00000480057 PNNQ9H307 717 aaKnown RBP14.56□□□□□ -0.08
VTI1A-204ENST00000480057 POLKQ9UBT6 870 aa14.56□□□□□ -0.08
VTI1A-204ENST00000480057 DCCP43146 1447 aa14.56□□□□□ -0.08
VTI1A-204ENST00000480057 DIAPH1O60610 1272 aaKnown RBP14.55□□□□□ -0.08
VTI1A-204ENST00000480057 SUPT16HQ9Y5B9 1047 aaKnown RBP14.55□□□□□ -0.08
VTI1A-204ENST00000480057 RNF123Q5XPI4 1314 aa14.55□□□□□ -0.08
VTI1A-204ENST00000480057 NUTM2FA1L443 756 aa14.54□□□□□ -0.08
VTI1A-204ENST00000480057 KIF1AQ12756 1690 aa14.53□□□□□ -0.08
VTI1A-204ENST00000480057 CCDC27Q2M243 656 aa14.53□□□□□ -0.08
VTI1A-204ENST00000480057 PIK3C2AO00443 1686 aa14.52□□□□□ -0.08
VTI1A-204ENST00000480057 APAF1O14727 1248 aa14.52□□□□□ -0.09
VTI1A-204ENST00000480057 U2AF1L5P0DN76 240 aaPredicted RBP14.52□□□□□ -0.09
VTI1A-204ENST00000480057 U2AF1Q01081 240 aaKnown RBP eCLIP14.52□□□□□ -0.09
VTI1A-204ENST00000480057 GOLGA2Q08379 1002 aa14.52□□□□□ -0.09
VTI1A-204ENST00000480057 PROSER2Q86WR7 435 aaPredicted RBP14.52□□□□□ -0.09
VTI1A-204ENST00000480057 CCDC146Q8IYE0 955 aa14.52□□□□□ -0.09
VTI1A-204ENST00000480057 PMFBP1Q8TBY8 1022 aa14.52□□□□□ -0.09
VTI1A-204ENST00000480057 PHF8Q9UPP1 1060 aa14.52□□□□□ -0.09
VTI1A-204ENST00000480057 KIF24Q5T7B8 1368 aa14.51□□□□□ -0.09
VTI1A-204ENST00000480057 FKBP8Q14318 412 aa14.51□□□□□ -0.09
VTI1A-204ENST00000480057 C19orf44Q9H6X5 657 aa14.51□□□□□ -0.09
VTI1A-204ENST00000480057 STRCQ7RTU9 1775 aa14.51□□□□□ -0.09
VTI1A-204ENST00000480057 STRCP1A6NGW2 1772 aa14.5□□□□□ -0.09
VTI1A-204ENST00000480057 FCHSD2O94868 740 aa14.5□□□□□ -0.09
VTI1A-204ENST00000480057 ZRANB1Q9UGI0 708 aa14.5□□□□□ -0.09
VTI1A-204ENST00000480057 SALL2Q9Y467 1007 aaPredicted RBP14.5□□□□□ -0.09
VTI1A-204ENST00000480057 E9PSI1 815 aa14.49□□□□□ -0.09
VTI1A-204ENST00000480057 C14orf37Q86TY3 774 aa14.49□□□□□ -0.09
VTI1A-204ENST00000480057 TRMT2AQ8IZ69 625 aaKnown RBP14.49□□□□□ -0.09
VTI1A-204ENST00000480057 PLEKHF1Q96S99 279 aa14.49□□□□□ -0.09
VTI1A-204ENST00000480057 IL13P35225 146 aa14.48□□□□□ -0.09
VTI1A-204ENST00000480057 SLFN5Q08AF3 891 aa14.48□□□□□ -0.09
VTI1A-204ENST00000480057 WDR63Q8IWG1 891 aa14.48□□□□□ -0.09
VTI1A-204ENST00000480057 TCP11L2Q8N4U5 519 aa14.48□□□□□ -0.09
VTI1A-204ENST00000480057 MARF1Q9Y4F3 1742 aaKnown RBP14.48□□□□□ -0.09
VTI1A-204ENST00000480057 C1orf167Q5SNV9 1468 aa14.47□□□□□ -0.09
VTI1A-204ENST00000480057 U2SURPO15042 1029 aaKnown RBP14.47□□□□□ -0.09
VTI1A-204ENST00000480057 HSPA2P54652 639 aa14.47□□□□□ -0.09
VTI1A-204ENST00000480057 WWC1Q8IX03 1113 aa14.47□□□□□ -0.09
VTI1A-204ENST00000480057 CDCA7LQ96GN5 454 aa14.47□□□□□ -0.09
VTI1A-204ENST00000480057 RCAN3Q9UKA8 241 aa14.47□□□□□ -0.09
VTI1A-204ENST00000480057 EMILIN1Q9Y6C2 1016 aa14.47□□□□□ -0.09
VTI1A-204ENST00000480057 MST1RQ04912 1400 aa14.47□□□□□ -0.09
VTI1A-204ENST00000480057 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
VTI1A-204ENST00000480057 MAPK8IP3Q9UPT6 1336 aa14.46□□□□□ -0.09
VTI1A-204ENST00000480057 DUSP27Q5VZP5 1158 aa14.46□□□□□ -0.09
VTI1A-204ENST00000480057 SBNO1A3KN83 1393 aa14.46□□□□□ -0.1
VTI1A-204ENST00000480057 SENP3-EIF4A1A0A087X0R7 540 aa14.45□□□□□ -0.1
VTI1A-204ENST00000480057 ESCO1Q5FWF5 840 aa14.45□□□□□ -0.1
VTI1A-204ENST00000480057 PEAK1Q9H792 1746 aa14.45□□□□□ -0.1
VTI1A-204ENST00000480057 PPM1GO15355 546 aaPredicted RBP14.44□□□□□ -0.1
VTI1A-204ENST00000480057 NEFMP07197 916 aa14.44□□□□□ -0.1
VTI1A-204ENST00000480057 RSPH6AQ9H0K4 717 aa14.44□□□□□ -0.1
VTI1A-204ENST00000480057 RTL1A6NKG5 1358 aa14.44□□□□□ -0.1
VTI1A-204ENST00000480057 FLT4P35916 1363 aa14.44□□□□□ -0.1
VTI1A-204ENST00000480057 RGPD1P0DJD0 1748 aa14.44□□□□□ -0.1
VTI1A-204ENST00000480057 ATF3P18847 181 aa14.43□□□□□ -0.1
VTI1A-204ENST00000480057 NLRP6P59044 892 aa14.43□□□□□ -0.1
VTI1A-204ENST00000480057 PSME1Q06323 249 aa14.43□□□□□ -0.1
VTI1A-204ENST00000480057 RRS1Q15050 365 aaKnown RBP14.43□□□□□ -0.1
VTI1A-204ENST00000480057 CADPS2Q86UW7 1296 aa14.43□□□□□ -0.1
VTI1A-204ENST00000480057 RBM33Q96EV2 1170 aaKnown RBP14.43□□□□□ -0.1
VTI1A-204ENST00000480057 MSH6P52701 1360 aa14.43□□□□□ -0.1
VTI1A-204ENST00000480057 TRPM3Q9HCF6 1732 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-204ENST00000480057 IL16Q14005 1332 aa14.42□□□□□ -0.1
VTI1A-204ENST00000480057 PHRF1Q9P1Y6 1649 aaKnown RBP14.42□□□□□ -0.1
VTI1A-204ENST00000480057 FBLN1P23142 703 aa14.42□□□□□ -0.1
VTI1A-204ENST00000480057 TMPOP42166 694 aaKnown RBP14.42□□□□□ -0.1
VTI1A-204ENST00000480057 ABTB2Q8N961 1025 aa14.42□□□□□ -0.1
VTI1A-204ENST00000480057 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
VTI1A-204ENST00000480057 XIRP1Q702N8 1843 aaKnown RBP14.41□□□□□ -0.1
VTI1A-204ENST00000480057 RRP1P56182 461 aaKnown RBP14.41□□□□□ -0.1
VTI1A-204ENST00000480057 DMRT2Q9Y5R5 561 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms