RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 TTC21BQ7Z4L5 1316 aa16.07■□□□□ 0.16
TRAPPC12-219ENST00000479955 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
TRAPPC12-219ENST00000479955 AHDC1Q5TGY3 1603 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC12-219ENST00000479955 SSH2Q76I76 1423 aa16.06■□□□□ 0.16
TRAPPC12-219ENST00000479955 PXDNQ92626 1479 aa16.05■□□□□ 0.16
TRAPPC12-219ENST00000479955 NSD2O96028 1365 aa16.05■□□□□ 0.16
TRAPPC12-219ENST00000479955 XPCQ01831 940 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC12-219ENST00000479955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRAPPC12-219ENST00000479955 ABTB2Q8N961 1025 aa16.05■□□□□ 0.16
TRAPPC12-219ENST00000479955 NPC1L1Q9UHC9 1359 aa16.04■□□□□ 0.16
TRAPPC12-219ENST00000479955 DDX17Q92841 729 aaKnown RBP16.04■□□□□ 0.16
TRAPPC12-219ENST00000479955 ARHGEF10O15013 1369 aa16.03■□□□□ 0.16
TRAPPC12-219ENST00000479955 PHLPP1O60346 1717 aa16.03■□□□□ 0.16
TRAPPC12-219ENST00000479955 SPATA31A3Q5VYP0 1347 aa16.03■□□□□ 0.16
TRAPPC12-219ENST00000479955 NLRP13Q86W25 1043 aa16.03■□□□□ 0.16
TRAPPC12-219ENST00000479955 NRKQ7Z2Y5 1582 aa16.03■□□□□ 0.16
TRAPPC12-219ENST00000479955 FYB1O15117 783 aa16.02■□□□□ 0.16
TRAPPC12-219ENST00000479955 LMOD2Q6P5Q4 547 aa16.02■□□□□ 0.16
TRAPPC12-219ENST00000479955 FBXO41Q8TF61 875 aa16.02■□□□□ 0.16
TRAPPC12-219ENST00000479955 COG3Q96JB2 828 aa16.02■□□□□ 0.16
TRAPPC12-219ENST00000479955 TRPM3Q9HCF6 1732 aaPredicted RBP16.02■□□□□ 0.15
TRAPPC12-219ENST00000479955 TNS3Q68CZ2 1445 aa16.02■□□□□ 0.15
TRAPPC12-219ENST00000479955 NLRP6P59044 892 aa16.01■□□□□ 0.15
TRAPPC12-219ENST00000479955 AMER1Q5JTC6 1135 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC12-219ENST00000479955 USP31Q70CQ4 1352 aa16■□□□□ 0.15
TRAPPC12-219ENST00000479955 NME9Q86XW9 330 aa16■□□□□ 0.15
TRAPPC12-219ENST00000479955 KIF20BQ96Q89 1820 aa15.99■□□□□ 0.15
TRAPPC12-219ENST00000479955 DIEXFQ68CQ4 756 aaKnown RBP15.98■□□□□ 0.15
TRAPPC12-219ENST00000479955 MORC1Q86VD1 984 aa15.98■□□□□ 0.15
TRAPPC12-219ENST00000479955 KCNH5Q8NCM2 988 aa15.98■□□□□ 0.15
TRAPPC12-219ENST00000479955 GGNBP2Q9H3C7 697 aa15.98■□□□□ 0.15
TRAPPC12-219ENST00000479955 ALS2Q96Q42 1657 aa15.98■□□□□ 0.15
TRAPPC12-219ENST00000479955 COL16A1Q07092 1604 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC12-219ENST00000479955 ANP32CO43423 234 aa15.97■□□□□ 0.15
TRAPPC12-219ENST00000479955 RALBP1Q15311 655 aa15.97■□□□□ 0.15
TRAPPC12-219ENST00000479955 CC2D1BQ5T0F9 858 aaKnown RBP15.97■□□□□ 0.15
TRAPPC12-219ENST00000479955 PIK3C2AO00443 1686 aa15.96■□□□□ 0.15
TRAPPC12-219ENST00000479955 HSPA1LP34931 641 aa15.96■□□□□ 0.15
TRAPPC12-219ENST00000479955 ANKRD26Q9UPS8 1709 aa15.95■□□□□ 0.14
TRAPPC12-219ENST00000479955 NUTM2GQ5VZR2 741 aa15.95■□□□□ 0.14
TRAPPC12-219ENST00000479955 JCADQ9P266 1359 aa15.95■□□□□ 0.14
TRAPPC12-219ENST00000479955 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
TRAPPC12-219ENST00000479955 HAP1P54257 671 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC12-219ENST00000479955 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
TRAPPC12-219ENST00000479955 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
TRAPPC12-219ENST00000479955 ZRANB1Q9UGI0 708 aa15.93■□□□□ 0.14
TRAPPC12-219ENST00000479955 USP19O94966 1318 aa15.93■□□□□ 0.14
TRAPPC12-219ENST00000479955 PNPLA6Q8IY17 1366 aa15.92■□□□□ 0.14
TRAPPC12-219ENST00000479955 GCP02774 474 aa15.92■□□□□ 0.14
TRAPPC12-219ENST00000479955 CNGB1Q14028 1251 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC12-219ENST00000479955 MED1Q15648 1581 aaPredicted RBP15.92■□□□□ 0.14
TRAPPC12-219ENST00000479955 COL22A1Q8NFW1 1626 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC12-219ENST00000479955 PRKRIP1Q9H875 184 aaPredicted RBP15.91■□□□□ 0.14
TRAPPC12-219ENST00000479955 SHPRHQ149N8 1683 aa15.91■□□□□ 0.14
TRAPPC12-219ENST00000479955 SPATA31A6Q5VVP1 1343 aa15.91■□□□□ 0.14
TRAPPC12-219ENST00000479955 AATKQ6ZMQ8 1374 aa15.9■□□□□ 0.14
TRAPPC12-219ENST00000479955 PARD3Q8TEW0 1356 aa15.9■□□□□ 0.14
TRAPPC12-219ENST00000479955 SLIT3O75094 1523 aa15.89■□□□□ 0.13
TRAPPC12-219ENST00000479955 PLEKHG5O94827 1062 aa15.88■□□□□ 0.13
TRAPPC12-219ENST00000479955 TNNT2P45379 298 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC12-219ENST00000479955 CABLES1Q8TDN4 633 aa15.88■□□□□ 0.13
TRAPPC12-219ENST00000479955 MARF1Q9Y4F3 1742 aaKnown RBP15.88■□□□□ 0.13
TRAPPC12-219ENST00000479955 SOX12O15370 315 aa15.87■□□□□ 0.13
TRAPPC12-219ENST00000479955 MYBBP1AQ9BQG0 1328 aaKnown RBP15.87■□□□□ 0.13
TRAPPC12-219ENST00000479955 KIF24Q5T7B8 1368 aa15.87■□□□□ 0.13
TRAPPC12-219ENST00000479955 PPP2R1AP30153 589 aa15.86■□□□□ 0.13
TRAPPC12-219ENST00000479955 PHRF1Q9P1Y6 1649 aaKnown RBP15.86■□□□□ 0.13
TRAPPC12-219ENST00000479955 CPDO75976 1380 aa15.86■□□□□ 0.13
TRAPPC12-219ENST00000479955 AMPHP49418 695 aa15.85■□□□□ 0.13
TRAPPC12-219ENST00000479955 ARHGEF25Q86VW2 580 aa15.85■□□□□ 0.13
TRAPPC12-219ENST00000479955 CRYBG1Q9Y4K1 1723 aa15.85■□□□□ 0.13
TRAPPC12-219ENST00000479955 MAP2P11137 1827 aaKnown RBP15.84■□□□□ 0.13
TRAPPC12-219ENST00000479955 ZC3H6P61129 1189 aaKnown RBP15.84■□□□□ 0.13
TRAPPC12-219ENST00000479955 CFAP53Q96M91 514 aa15.84■□□□□ 0.13
TRAPPC12-219ENST00000479955 POLKQ9UBT6 870 aa15.84■□□□□ 0.13
TRAPPC12-219ENST00000479955 NFAT5O94916 1531 aa15.84■□□□□ 0.13
TRAPPC12-219ENST00000479955 NUTM2BA6NNL0 878 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC12-219ENST00000479955 NUTM2EB1AL46 878 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC12-219ENST00000479955 MTHFSP49914 203 aa15.83■□□□□ 0.12
TRAPPC12-219ENST00000479955 NUTM2AQ8IVF1 878 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC12-219ENST00000479955 PRDM11Q9NQV5 511 aa15.83■□□□□ 0.12
TRAPPC12-219ENST00000479955 ABCA3Q99758 1704 aa15.82■□□□□ 0.12
TRAPPC12-219ENST00000479955 PPM1GO15355 546 aaPredicted RBP15.82■□□□□ 0.12
TRAPPC12-219ENST00000479955 RRS1Q15050 365 aaKnown RBP15.82■□□□□ 0.12
TRAPPC12-219ENST00000479955 MAP3K19Q56UN5 1328 aa15.82■□□□□ 0.12
TRAPPC12-219ENST00000479955 RTL1A6NKG5 1358 aa15.82■□□□□ 0.12
TRAPPC12-219ENST00000479955 ZBTB7CA1YPR0 619 aa15.81■□□□□ 0.12
TRAPPC12-219ENST00000479955 FLT4P35916 1363 aa15.81■□□□□ 0.12
TRAPPC12-219ENST00000479955 IP6K1Q92551 441 aa15.81■□□□□ 0.12
TRAPPC12-219ENST00000479955 KIAA0232Q92628 1395 aa15.81■□□□□ 0.12
TRAPPC12-219ENST00000479955 LTN1O94822 1766 aa15.8■□□□□ 0.12
TRAPPC12-219ENST00000479955 ABCC6O95255 1503 aa15.8■□□□□ 0.12
TRAPPC12-219ENST00000479955 SMG6Q86US8 1419 aaKnown RBP15.8■□□□□ 0.12
TRAPPC12-219ENST00000479955 ADAMTS2O95450 1211 aa15.8■□□□□ 0.12
TRAPPC12-219ENST00000479955 FBLN1P23142 703 aa15.8■□□□□ 0.12
TRAPPC12-219ENST00000479955 EMILIN1Q9Y6C2 1016 aa15.8■□□□□ 0.12
TRAPPC12-219ENST00000479955 HOXC9P31274 260 aa15.79■□□□□ 0.12
TRAPPC12-219ENST00000479955 MEX3CQ5U5Q3 659 aaKnown RBP15.79■□□□□ 0.12
TRAPPC12-219ENST00000479955 BLMP54132 1417 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC12-219ENST00000479955 FAM83GA6ND36 823 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms