RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 PNNQ9H307 717 aaKnown RBP24.65■■□□□ 1.54
TNFRSF8-204ENST00000479933 KIF13AQ9H1H9 1805 aa24.64■■□□□ 1.54
TNFRSF8-204ENST00000479933 CT47B1P0C2W7 299 aaPredicted RBP24.64■■□□□ 1.54
TNFRSF8-204ENST00000479933 NEFMP07197 916 aa24.63■■□□□ 1.53
TNFRSF8-204ENST00000479933 ESF1Q9H501 851 aaKnown RBP24.62■■□□□ 1.53
TNFRSF8-204ENST00000479933 CABP1Q9NZU7 370 aa24.62■■□□□ 1.53
TNFRSF8-204ENST00000479933 PNPLA6Q8IY17 1366 aa24.61■■□□□ 1.53
TNFRSF8-204ENST00000479933 HDGFP51858 240 aaKnown RBP24.61■■□□□ 1.53
TNFRSF8-204ENST00000479933 NPM2Q86SE8 214 aaKnown RBP24.61■■□□□ 1.53
TNFRSF8-204ENST00000479933 PLEKHF1Q96S99 279 aa24.61■■□□□ 1.53
TNFRSF8-204ENST00000479933 NRXN3Q9Y4C0 1643 aa24.61■■□□□ 1.53
TNFRSF8-204ENST00000479933 MAPK8IP3Q9UPT6 1336 aa24.61■■□□□ 1.53
TNFRSF8-204ENST00000479933 CLUAP1Q96AJ1 413 aa24.61■■□□□ 1.53
TNFRSF8-204ENST00000479933 U2SURPO15042 1029 aaKnown RBP24.6■■□□□ 1.53
TNFRSF8-204ENST00000479933 KNDC1Q76NI1 1749 aa24.6■■□□□ 1.53
TNFRSF8-204ENST00000479933 MLECQ14165 292 aa24.59■■□□□ 1.53
TNFRSF8-204ENST00000479933 CDC42BPGQ6DT37 1551 aa24.59■■□□□ 1.53
TNFRSF8-204ENST00000479933 DIAPH1O60610 1272 aaKnown RBP24.59■■□□□ 1.53
TNFRSF8-204ENST00000479933 FAM161AQ3B820 660 aa24.59■■□□□ 1.53
TNFRSF8-204ENST00000479933 DDRGK1Q96HY6 314 aa24.58■■□□□ 1.53
TNFRSF8-204ENST00000479933 ZMYM3Q14202 1370 aa24.58■■□□□ 1.53
TNFRSF8-204ENST00000479933 IL16Q14005 1332 aa24.58■■□□□ 1.53
TNFRSF8-204ENST00000479933 SIRT1Q96EB6 747 aa24.58■■□□□ 1.52
TNFRSF8-204ENST00000479933 TMPOP42166 694 aaKnown RBP24.57■■□□□ 1.52
TNFRSF8-204ENST00000479933 SKAP1Q86WV1 359 aa24.57■■□□□ 1.52
TNFRSF8-204ENST00000479933 PANK1Q8TE04 598 aa24.57■■□□□ 1.52
TNFRSF8-204ENST00000479933 FRAT1Q92837 279 aaPredicted RBP24.57■■□□□ 1.52
TNFRSF8-204ENST00000479933 COG6Q9Y2V7 657 aa24.56■■□□□ 1.52
TNFRSF8-204ENST00000479933 WAPLQ7Z5K2 1190 aa24.55■■□□□ 1.52
TNFRSF8-204ENST00000479933 FAM135BQ49AJ0 1406 aa24.55■■□□□ 1.52
TNFRSF8-204ENST00000479933 PMFBP1Q8TBY8 1022 aa24.53■■□□□ 1.52
TNFRSF8-204ENST00000479933 TECPR2O15040 1411 aa24.53■■□□□ 1.52
TNFRSF8-204ENST00000479933 EDC4Q6P2E9 1401 aaKnown RBP24.53■■□□□ 1.52
TNFRSF8-204ENST00000479933 WASLO00401 505 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF8-204ENST00000479933 CPSF1Q10570 1443 aaKnown RBP24.52■■□□□ 1.52
TNFRSF8-204ENST00000479933 FCHSD2O94868 740 aa24.52■■□□□ 1.52
TNFRSF8-204ENST00000479933 RSPH6AQ9H0K4 717 aa24.52■■□□□ 1.52
TNFRSF8-204ENST00000479933 TNRQ92752 1358 aa24.51■■□□□ 1.51
TNFRSF8-204ENST00000479933 TRIM35Q9UPQ4 493 aa24.51■■□□□ 1.51
TNFRSF8-204ENST00000479933 CPS1P31327 1500 aa24.51■■□□□ 1.51
TNFRSF8-204ENST00000479933 IGHDP01880 384 aa24.5■■□□□ 1.51
TNFRSF8-204ENST00000479933 GSE1Q14687 1217 aa24.5■■□□□ 1.51
TNFRSF8-204ENST00000479933 METP08581 1390 aa24.5■■□□□ 1.51
TNFRSF8-204ENST00000479933 C8orf34Q49A92 452 aa24.49■■□□□ 1.51
TNFRSF8-204ENST00000479933 PPIP5K1Q6PFW1 1433 aa24.49■■□□□ 1.51
TNFRSF8-204ENST00000479933 VIRMAQ69YN4 1812 aaKnown RBP24.48■■□□□ 1.51
TNFRSF8-204ENST00000479933 MAP2P11137 1827 aaKnown RBP24.48■■□□□ 1.51
TNFRSF8-204ENST00000479933 RGS3P49796 1198 aa24.48■■□□□ 1.51
TNFRSF8-204ENST00000479933 ZKSCAN2Q63HK3 967 aa24.48■■□□□ 1.51
TNFRSF8-204ENST00000479933 UBR1Q8IWV7 1749 aa24.47■■□□□ 1.51
TNFRSF8-204ENST00000479933 RIPK4P57078 832 aa24.47■■□□□ 1.51
TNFRSF8-204ENST00000479933 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.47■■□□□ 1.51
TNFRSF8-204ENST00000479933 MON2Q7Z3U7 1717 aa24.46■■□□□ 1.51
TNFRSF8-204ENST00000479933 POLKQ9UBT6 870 aa24.46■■□□□ 1.51
TNFRSF8-204ENST00000479933 BRPF3Q9ULD4 1205 aa24.46■■□□□ 1.51
TNFRSF8-204ENST00000479933 LRRC7Q96NW7 1537 aa24.45■■□□□ 1.51
TNFRSF8-204ENST00000479933 LAS1LQ9Y4W2 734 aaKnown RBP24.45■■□□□ 1.5
TNFRSF8-204ENST00000479933 RLBP1P12271 317 aa24.44■■□□□ 1.5
TNFRSF8-204ENST00000479933 AATKQ6ZMQ8 1374 aa24.44■■□□□ 1.5
TNFRSF8-204ENST00000479933 TMEM2Q9UHN6 1383 aa24.44■■□□□ 1.5
TNFRSF8-204ENST00000479933 EXOSC9Q06265 439 aaKnown RBP24.44■■□□□ 1.5
TNFRSF8-204ENST00000479933 TSR2Q969E8 191 aaKnown RBP24.44■■□□□ 1.5
TNFRSF8-204ENST00000479933 BCL2L13Q9BXK5 485 aa24.44■■□□□ 1.5
TNFRSF8-204ENST00000479933 AKAP12Q02952 1782 aa24.44■■□□□ 1.5
TNFRSF8-204ENST00000479933 ITSN1Q15811 1721 aa24.44■■□□□ 1.5
TNFRSF8-204ENST00000479933 CDK12Q9NYV4 1490 aaPredicted RBP24.43■■□□□ 1.5
TNFRSF8-204ENST00000479933 MVPQ14764 893 aaKnown RBP24.43■■□□□ 1.5
TNFRSF8-204ENST00000479933 TXNDC2Q86VQ3 553 aa24.43■■□□□ 1.5
TNFRSF8-204ENST00000479933 DZIP1LQ8IYY4 767 aaKnown RBP24.43■■□□□ 1.5
TNFRSF8-204ENST00000479933 NUDT16Q96DE0 195 aaKnown RBP24.43■■□□□ 1.5
TNFRSF8-204ENST00000479933 RWDD1Q9H446 243 aaPredicted RBP24.43■■□□□ 1.5
TNFRSF8-204ENST00000479933 CCDC61Q9Y6R9 512 aa24.43■■□□□ 1.5
TNFRSF8-204ENST00000479933 FTSJ3Q8IY81 847 aaKnown RBP24.42■■□□□ 1.5
TNFRSF8-204ENST00000479933 SMC4Q9NTJ3 1288 aa24.42■■□□□ 1.5
TNFRSF8-204ENST00000479933 FAM43AQ8N2R8 423 aa24.4■■□□□ 1.5
TNFRSF8-204ENST00000479933 ZNF692Q9BU19 519 aaPredicted RBP24.4■■□□□ 1.5
TNFRSF8-204ENST00000479933 CALD1Q05682 793 aaKnown RBP24.39■■□□□ 1.49
TNFRSF8-204ENST00000479933 PRKAR2BP31323 418 aa24.38■■□□□ 1.49
TNFRSF8-204ENST00000479933 ZNF428Q96B54 188 aa24.38■■□□□ 1.49
TNFRSF8-204ENST00000479933 PCDHB15Q9Y5E8 787 aa24.38■■□□□ 1.49
TNFRSF8-204ENST00000479933 C3P01024 1663 aa24.38■■□□□ 1.49
TNFRSF8-204ENST00000479933 TNNQ9UQP3 1299 aa24.38■■□□□ 1.49
TNFRSF8-204ENST00000479933 COG3Q96JB2 828 aa24.37■■□□□ 1.49
TNFRSF8-204ENST00000479933 PKNOX2Q96KN3 472 aa24.37■■□□□ 1.49
TNFRSF8-204ENST00000479933 KIF16BQ96L93 1317 aa24.36■■□□□ 1.49
TNFRSF8-204ENST00000479933 EIF5BO60841 1220 aaKnown RBP24.36■■□□□ 1.49
TNFRSF8-204ENST00000479933 ALDH1L2Q3SY69 923 aa24.36■■□□□ 1.49
TNFRSF8-204ENST00000479933 SSH1Q8WYL5 1049 aa24.36■■□□□ 1.49
TNFRSF8-204ENST00000479933 IPO8O15397 1037 aaKnown RBP24.35■■□□□ 1.49
TNFRSF8-204ENST00000479933 NFE2L2Q16236 605 aa24.35■■□□□ 1.49
TNFRSF8-204ENST00000479933 ATF7IPQ6VMQ6 1270 aa24.35■■□□□ 1.49
TNFRSF8-204ENST00000479933 NME9Q86XW9 330 aa24.35■■□□□ 1.49
TNFRSF8-204ENST00000479933 DDX19BQ9UMR2 479 aa24.35■■□□□ 1.49
TNFRSF8-204ENST00000479933 PLEKHG1Q9ULL1 1385 aa24.35■■□□□ 1.49
TNFRSF8-204ENST00000479933 DAXXQ9UER7 740 aaPredicted RBP24.35■■□□□ 1.49
TNFRSF8-204ENST00000479933 IL13P35225 146 aa24.34■■□□□ 1.49
TNFRSF8-204ENST00000479933 ADAMTS13Q76LX8 1427 aa24.34■■□□□ 1.49
TNFRSF8-204ENST00000479933 TRIM27P14373 513 aa24.32■■□□□ 1.48
TNFRSF8-204ENST00000479933 EMILIN1Q9Y6C2 1016 aa24.32■■□□□ 1.48
TNFRSF8-204ENST00000479933 ROBO2Q9HCK4 1378 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms