RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 CFAP74Q9C0B2 1584 aa16.91■□□□□ 0.3
PDZRN3-208ENST00000479530 L1TD1Q5T7N2 865 aaKnown RBP16.9■□□□□ 0.3
PDZRN3-208ENST00000479530 WAPLQ7Z5K2 1190 aa16.9■□□□□ 0.3
PDZRN3-208ENST00000479530 CABP1Q9NZU7 370 aa16.9■□□□□ 0.3
PDZRN3-208ENST00000479530 ARHGEF28Q8N1W1 1705 aaKnown RBP16.9■□□□□ 0.3
PDZRN3-208ENST00000479530 PLEKHF1Q96S99 279 aa16.89■□□□□ 0.3
PDZRN3-208ENST00000479530 PUS7Q96PZ0 661 aaKnown RBP16.89■□□□□ 0.29
PDZRN3-208ENST00000479530 CDK19Q9BWU1 502 aa16.89■□□□□ 0.29
PDZRN3-208ENST00000479530 ARHGAP31Q2M1Z3 1444 aa16.89■□□□□ 0.29
PDZRN3-208ENST00000479530 MCM4P33991 863 aa16.89■□□□□ 0.29
PDZRN3-208ENST00000479530 MLECQ14165 292 aa16.89■□□□□ 0.29
PDZRN3-208ENST00000479530 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.29
PDZRN3-208ENST00000479530 FAM69CQ0P6D2 419 aa16.88■□□□□ 0.29
PDZRN3-208ENST00000479530 CCDC27Q2M243 656 aa16.88■□□□□ 0.29
PDZRN3-208ENST00000479530 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
PDZRN3-208ENST00000479530 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.87■□□□□ 0.29
PDZRN3-208ENST00000479530 ABCC11Q96J66 1382 aa16.87■□□□□ 0.29
PDZRN3-208ENST00000479530 FSD2A1L4K1 749 aa16.87■□□□□ 0.29
PDZRN3-208ENST00000479530 TMPOP42166 694 aaKnown RBP16.87■□□□□ 0.29
PDZRN3-208ENST00000479530 STAG3Q9UJ98 1225 aa16.87■□□□□ 0.29
PDZRN3-208ENST00000479530 PTPRMP28827 1452 aa16.86■□□□□ 0.29
PDZRN3-208ENST00000479530 GOLGA6L3A6NEY3 463 aa16.86■□□□□ 0.29
PDZRN3-208ENST00000479530 MFAP1P55081 439 aaKnown RBP16.86■□□□□ 0.29
PDZRN3-208ENST00000479530 CD163L1Q9NR16 1453 aa16.86■□□□□ 0.29
PDZRN3-208ENST00000479530 YTHDC2Q9H6S0 1430 aaKnown RBP16.85■□□□□ 0.29
PDZRN3-208ENST00000479530 RWDD1Q9H446 243 aaPredicted RBP16.85■□□□□ 0.29
PDZRN3-208ENST00000479530 MYO5BQ9ULV0 1848 aa16.85■□□□□ 0.29
PDZRN3-208ENST00000479530 C22orf23Q9BZE7 217 aa16.84■□□□□ 0.29
PDZRN3-208ENST00000479530 MYH16Q9H6N6 1097 aa16.84■□□□□ 0.29
PDZRN3-208ENST00000479530 ZFYVE9O95405 1425 aa16.84■□□□□ 0.29
PDZRN3-208ENST00000479530 RICTORQ6R327 1708 aa16.84■□□□□ 0.29
PDZRN3-208ENST00000479530 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.29
PDZRN3-208ENST00000479530 NSD2O96028 1365 aa16.83■□□□□ 0.29
PDZRN3-208ENST00000479530 MVPQ14764 893 aaKnown RBP16.83■□□□□ 0.28
PDZRN3-208ENST00000479530 SSH1Q8WYL5 1049 aa16.83■□□□□ 0.28
PDZRN3-208ENST00000479530 USP32Q8NFA0 1604 aa16.82■□□□□ 0.28
PDZRN3-208ENST00000479530 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
PDZRN3-208ENST00000479530 TRAK2O60296 914 aa16.82■□□□□ 0.28
PDZRN3-208ENST00000479530 RIPK4P57078 832 aa16.82■□□□□ 0.28
PDZRN3-208ENST00000479530 NCKAP5LQ9HCH0 1330 aa16.82■□□□□ 0.28
PDZRN3-208ENST00000479530 ZRANB1Q9UGI0 708 aa16.82■□□□□ 0.28
PDZRN3-208ENST00000479530 ZMYM3Q14202 1370 aa16.81■□□□□ 0.28
PDZRN3-208ENST00000479530 SMC4Q9NTJ3 1288 aa16.81■□□□□ 0.28
PDZRN3-208ENST00000479530 AAMPQ13685 434 aa16.8■□□□□ 0.28
PDZRN3-208ENST00000479530 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
PDZRN3-208ENST00000479530 TRIM27P14373 513 aa16.8■□□□□ 0.28
PDZRN3-208ENST00000479530 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
PDZRN3-208ENST00000479530 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
PDZRN3-208ENST00000479530 CHMP5Q9NZZ3 219 aa16.79■□□□□ 0.28
PDZRN3-208ENST00000479530 ATAD2Q6PL18 1390 aa16.79■□□□□ 0.28
PDZRN3-208ENST00000479530 THUMPD2Q9BTF0 503 aaKnown RBP16.79■□□□□ 0.28
PDZRN3-208ENST00000479530 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
PDZRN3-208ENST00000479530 HDGFL2Q7Z4V5 671 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-208ENST00000479530 DZIP1LQ8IYY4 767 aaKnown RBP16.78■□□□□ 0.28
PDZRN3-208ENST00000479530 HMOX1P09601 288 aa16.78■□□□□ 0.28
PDZRN3-208ENST00000479530 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
PDZRN3-208ENST00000479530 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
PDZRN3-208ENST00000479530 NOB1Q9ULX3 412 aaKnown RBP16.78■□□□□ 0.28
PDZRN3-208ENST00000479530 PREX1Q8TCU6 1659 aa16.78■□□□□ 0.28
PDZRN3-208ENST00000479530 PHACTR3Q96KR7 559 aa16.77■□□□□ 0.28
PDZRN3-208ENST00000479530 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.28
PDZRN3-208ENST00000479530 ALKQ9UM73 1620 aa16.77■□□□□ 0.28
PDZRN3-208ENST00000479530 ARHGEF40Q8TER5 1519 aa16.76■□□□□ 0.27
PDZRN3-208ENST00000479530 PNNQ9H307 717 aaKnown RBP16.76■□□□□ 0.27
PDZRN3-208ENST00000479530 PRKAR2BP31323 418 aa16.76■□□□□ 0.27
PDZRN3-208ENST00000479530 CLCN1P35523 988 aa16.76■□□□□ 0.27
PDZRN3-208ENST00000479530 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
PDZRN3-208ENST00000479530 TXNDC2Q86VQ3 553 aa16.75■□□□□ 0.27
PDZRN3-208ENST00000479530 ADGRB2O60241 1585 aa16.75■□□□□ 0.27
PDZRN3-208ENST00000479530 NME9Q86XW9 330 aa16.75■□□□□ 0.27
PDZRN3-208ENST00000479530 ITPRIPQ8IWB1 547 aa16.75■□□□□ 0.27
PDZRN3-208ENST00000479530 ERBB4Q15303 1308 aa16.74■□□□□ 0.27
PDZRN3-208ENST00000479530 TMEM57Q8N5G2 664 aa16.74■□□□□ 0.27
PDZRN3-208ENST00000479530 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
PDZRN3-208ENST00000479530 GRPEL1Q9HAV7 217 aa16.73■□□□□ 0.27
PDZRN3-208ENST00000479530 MRE11P49959 708 aa16.72■□□□□ 0.27
PDZRN3-208ENST00000479530 ATF7IPQ6VMQ6 1270 aa16.72■□□□□ 0.27
PDZRN3-208ENST00000479530 HSCBQ8IWL3 235 aa16.72■□□□□ 0.27
PDZRN3-208ENST00000479530 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-208ENST00000479530 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
PDZRN3-208ENST00000479530 DDIT3P35638 169 aa16.72■□□□□ 0.27
PDZRN3-208ENST00000479530 HDAC1Q13547 482 aaPredicted RBP16.72■□□□□ 0.27
PDZRN3-208ENST00000479530 METP08581 1390 aa16.71■□□□□ 0.27
PDZRN3-208ENST00000479530 GAS2L3Q86XJ1 694 aa16.71■□□□□ 0.27
PDZRN3-208ENST00000479530 A2ML1A8K2U0 1454 aa16.71■□□□□ 0.27
PDZRN3-208ENST00000479530 RIMS2Q9UQ26 1411 aa16.7■□□□□ 0.26
PDZRN3-208ENST00000479530 RRS1Q15050 365 aaKnown RBP16.7■□□□□ 0.26
PDZRN3-208ENST00000479530 TSPYL6Q8N831 410 aa16.7■□□□□ 0.26
PDZRN3-208ENST00000479530 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
PDZRN3-208ENST00000479530 TNPO1Q92973 898 aaKnown RBP16.7■□□□□ 0.26
PDZRN3-208ENST00000479530 TSPOAP1O95153 1857 aa16.69■□□□□ 0.26
PDZRN3-208ENST00000479530 FCHSD2O94868 740 aa16.69■□□□□ 0.26
PDZRN3-208ENST00000479530 LNPKQ9C0E8 428 aa16.69■□□□□ 0.26
PDZRN3-208ENST00000479530 NCOA3Q9Y6Q9 1424 aa16.69■□□□□ 0.26
PDZRN3-208ENST00000479530 DDX11L8A8MPP1 907 aa16.68■□□□□ 0.26
PDZRN3-208ENST00000479530 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
PDZRN3-208ENST00000479530 DDX19BQ9UMR2 479 aa16.68■□□□□ 0.26
PDZRN3-208ENST00000479530 WASLO00401 505 aaPredicted RBP16.67■□□□□ 0.26
PDZRN3-208ENST00000479530 CD2BP2O95400 341 aaKnown RBP16.67■□□□□ 0.26
PDZRN3-208ENST00000479530 NUTM2FA1L443 756 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms