RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
RAD51B-208ENST00000479335 AATKQ6ZMQ8 1374 aa13□□□□□ -0.33
RAD51B-208ENST00000479335 GOLGA2Q08379 1002 aa13□□□□□ -0.33
RAD51B-208ENST00000479335 ANKARQ7Z5J8 1434 aa12.99□□□□□ -0.33
RAD51B-208ENST00000479335 APAF1O14727 1248 aa12.99□□□□□ -0.33
RAD51B-208ENST00000479335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■■□□□ 12.6
RAD51B-208ENST00000479335 KCNA6P17658 529 aa12.99□□□□□ -0.33
RAD51B-208ENST00000479335 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
RAD51B-208ENST00000479335 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
RAD51B-208ENST00000479335 NPHP4O75161 1426 aaPredicted RBP12.98□□□□□ -0.33
RAD51B-208ENST00000479335 ACEP12821 1306 aa12.98□□□□□ -0.33
RAD51B-208ENST00000479335 CCDC27Q2M243 656 aa12.98□□□□□ -0.33
RAD51B-208ENST00000479335 CCDC146Q8IYE0 955 aa12.98□□□□□ -0.33
RAD51B-208ENST00000479335 TRMT2AQ8IZ69 625 aaKnown RBP12.98□□□□□ -0.33
RAD51B-208ENST00000479335 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
RAD51B-208ENST00000479335 COG3Q96JB2 828 aa12.98□□□□□ -0.33
RAD51B-208ENST00000479335 RCAN3Q9UKA8 241 aa12.98□□□□□ -0.33
RAD51B-208ENST00000479335 SENP3-EIF4A1A0A087X0R7 540 aa12.97□□□□□ -0.33
RAD51B-208ENST00000479335 PPP4R2Q9NY27 417 aa12.97□□□□□ -0.33
RAD51B-208ENST00000479335 TTC21BQ7Z4L5 1316 aa12.96□□□□□ -0.33
RAD51B-208ENST00000479335 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.33
RAD51B-208ENST00000479335 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.33
RAD51B-208ENST00000479335 DIAPH1O60610 1272 aaKnown RBP12.96□□□□□ -0.33
RAD51B-208ENST00000479335 SLFN5Q08AF3 891 aa12.96□□□□□ -0.33
RAD51B-208ENST00000479335 POLKQ9UBT6 870 aa12.96□□□□□ -0.33
RAD51B-208ENST00000479335 USP6P35125 1406 aa12.96□□□□□ -0.33
RAD51B-208ENST00000479335 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
RAD51B-208ENST00000479335 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
RAD51B-208ENST00000479335 DUSP27Q5VZP5 1158 aa12.95□□□□□ -0.34
RAD51B-208ENST00000479335 SSH2Q76I76 1423 aa12.95□□□□□ -0.34
RAD51B-208ENST00000479335 NRKQ7Z2Y5 1582 aa12.95□□□□□ -0.34
RAD51B-208ENST00000479335 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
RAD51B-208ENST00000479335 E9PSI1 815 aa12.95□□□□□ -0.34
RAD51B-208ENST00000479335 NME9Q86XW9 330 aa12.95□□□□□ -0.34
RAD51B-208ENST00000479335 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
RAD51B-208ENST00000479335 TCP11L2Q8N4U5 519 aa12.95□□□□□ -0.34
RAD51B-208ENST00000479335 IQSEC2Q5JU85 1478 aa12.94□□□□□ -0.34
RAD51B-208ENST00000479335 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
RAD51B-208ENST00000479335 FMN2Q9NZ56 1722 aa12.94□□□□□ -0.34
RAD51B-208ENST00000479335 NKTRP30414 1462 aaKnown RBP12.93□□□□□ -0.34
RAD51B-208ENST00000479335 FCHSD2O94868 740 aa12.93□□□□□ -0.34
RAD51B-208ENST00000479335 RRP1P56182 461 aaKnown RBP12.93□□□□□ -0.34
RAD51B-208ENST00000479335 WWC1Q8IX03 1113 aa12.93□□□□□ -0.34
RAD51B-208ENST00000479335 CDK12Q9NYV4 1490 aaPredicted RBP12.93□□□□□ -0.34
RAD51B-208ENST00000479335 IRX6P78412 446 aaPredicted RBP12.91□□□□□ -0.34
RAD51B-208ENST00000479335 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
RAD51B-208ENST00000479335 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
RAD51B-208ENST00000479335 OVOS2A0A0J9YW53 1432 aa12.91□□□□□ -0.34
RAD51B-208ENST00000479335 OVOS2Q6IE36 1432 aa12.91□□□□□ -0.34
RAD51B-208ENST00000479335 U2SURPO15042 1029 aaKnown RBP12.91□□□□□ -0.34
RAD51B-208ENST00000479335 NGDNQ8NEJ9 315 aaKnown RBP12.91□□□□□ -0.34
RAD51B-208ENST00000479335 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
RAD51B-208ENST00000479335 NWD1Q149M9 1564 aa12.91□□□□□ -0.34
RAD51B-208ENST00000479335 ADGRL3Q9HAR2 1447 aa12.9□□□□□ -0.34
RAD51B-208ENST00000479335 NUTM2FA1L443 756 aa12.9□□□□□ -0.34
RAD51B-208ENST00000479335 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.35
RAD51B-208ENST00000479335 ZRANB1Q9UGI0 708 aa12.89□□□□□ -0.35
RAD51B-208ENST00000479335 NALCNQ8IZF0 1738 aa12.89□□□□□ -0.35
RAD51B-208ENST00000479335 IL13P35225 146 aa12.88□□□□□ -0.35
RAD51B-208ENST00000479335 PMFBP1Q8TBY8 1022 aa12.88□□□□□ -0.35
RAD51B-208ENST00000479335 MAPK8IP3Q9UPT6 1336 aa12.88□□□□□ -0.35
RAD51B-208ENST00000479335 NEFMP07197 916 aa12.88□□□□□ -0.35
RAD51B-208ENST00000479335 EMILIN1Q9Y6C2 1016 aa12.88□□□□□ -0.35
RAD51B-208ENST00000479335 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
RAD51B-208ENST00000479335 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.87□□□□□ -0.35
RAD51B-208ENST00000479335 PHF8Q9UPP1 1060 aa12.87□□□□□ -0.35
RAD51B-208ENST00000479335 LRRC7Q96NW7 1537 aa12.86□□□□□ -0.35
RAD51B-208ENST00000479335 NCOA3Q9Y6Q9 1424 aa12.86□□□□□ -0.35
RAD51B-208ENST00000479335 PPM1GO15355 546 aaPredicted RBP12.86□□□□□ -0.35
RAD51B-208ENST00000479335 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
RAD51B-208ENST00000479335 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
RAD51B-208ENST00000479335 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
RAD51B-208ENST00000479335 IL16Q14005 1332 aa12.86□□□□□ -0.35
RAD51B-208ENST00000479335 FBLN1P23142 703 aa12.85□□□□□ -0.35
RAD51B-208ENST00000479335 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
RAD51B-208ENST00000479335 MYH16Q9H6N6 1097 aa12.85□□□□□ -0.35
RAD51B-208ENST00000479335 KIF24Q5T7B8 1368 aa12.85□□□□□ -0.35
RAD51B-208ENST00000479335 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
RAD51B-208ENST00000479335 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
RAD51B-208ENST00000479335 RRS1Q15050 365 aaKnown RBP12.84□□□□□ -0.35
RAD51B-208ENST00000479335 DMRT2Q9Y5R5 561 aa12.84□□□□□ -0.35
RAD51B-208ENST00000479335 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
RAD51B-208ENST00000479335 MAPK8IP2Q13387 824 aaPredicted RBP12.83□□□□□ -0.36
RAD51B-208ENST00000479335 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.36
RAD51B-208ENST00000479335 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
RAD51B-208ENST00000479335 PRKAR2BP31323 418 aa12.82□□□□□ -0.36
RAD51B-208ENST00000479335 RIPK4P57078 832 aa12.82□□□□□ -0.36
RAD51B-208ENST00000479335 C19orf44Q9H6X5 657 aa12.82□□□□□ -0.36
RAD51B-208ENST00000479335 PIK3C2AO00443 1686 aa12.82□□□□□ -0.36
RAD51B-208ENST00000479335 ZBTB22O15209 634 aa12.81□□□□□ -0.36
RAD51B-208ENST00000479335 NLRP6P59044 892 aa12.81□□□□□ -0.36
RAD51B-208ENST00000479335 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
RAD51B-208ENST00000479335 CALD1Q05682 793 aaKnown RBP12.8□□□□□ -0.36
RAD51B-208ENST00000479335 NFE2L2Q16236 605 aa12.8□□□□□ -0.36
RAD51B-208ENST00000479335 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
RAD51B-208ENST00000479335 FLT4P35916 1363 aa12.8□□□□□ -0.36
RAD51B-208ENST00000479335 EIF4A2Q14240 407 aaKnown RBP12.8□□□□□ -0.36
RAD51B-208ENST00000479335 CCDC136Q96JN2 1154 aa12.8□□□□□ -0.36
RAD51B-208ENST00000479335 DCCP43146 1447 aa12.79□□□□□ -0.36
RAD51B-208ENST00000479335 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms