RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 NINLQ9Y2I6 1382 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 PRR36Q9H6K5 1346 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 NRXN3Q9Y4C0 1643 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 WWC1Q8IX03 1113 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 TSHZ2Q9NRE2 1034 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 TBX22Q9Y458 520 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 NLRP1Q9C000 1473 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 PLEKHG1Q9ULL1 1385 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 KCNA6P17658 529 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 RRP1P56182 461 aaKnown RBP5.43□□□□□ -1.54
USP25-208ENST00000478932 SLFN5Q08AF3 891 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 ERICH6BQ5W0A0 696 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 PMFBP1Q8TBY8 1022 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 SIRT1Q96EB6 747 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 POLKQ9UBT6 870 aa5.43□□□□□ -1.54
USP25-208ENST00000478932 UBR1Q8IWV7 1749 aa5.42□□□□□ -1.54
USP25-208ENST00000478932 PPIP5K1Q6PFW1 1433 aa5.42□□□□□ -1.54
USP25-208ENST00000478932 INSRP06213 1382 aa5.42□□□□□ -1.54
USP25-208ENST00000478932 SOX12O15370 315 aa5.42□□□□□ -1.54
USP25-208ENST00000478932 EXOC6Q8TAG9 804 aa5.42□□□□□ -1.54
USP25-208ENST00000478932 RUNDC1Q96C34 613 aa5.42□□□□□ -1.54
USP25-208ENST00000478932 CCDC136Q96JN2 1154 aa5.42□□□□□ -1.54
USP25-208ENST00000478932 ZBTB12Q9Y330 459 aaPredicted RBP5.42□□□□□ -1.54
USP25-208ENST00000478932 RRS1Q15050 365 aaKnown RBP5.42□□□□□ -1.54
USP25-208ENST00000478932 C20orf194Q5TEA3 1177 aa5.42□□□□□ -1.54
USP25-208ENST00000478932 EMILIN1Q9Y6C2 1016 aa5.42□□□□□ -1.54
USP25-208ENST00000478932 FAM135BQ49AJ0 1406 aa5.41□□□□□ -1.54
USP25-208ENST00000478932 PTPRUQ92729 1446 aa5.41□□□□□ -1.54
USP25-208ENST00000478932 NSD2O96028 1365 aa5.41□□□□□ -1.54
USP25-208ENST00000478932 C3P01024 1663 aa5.41□□□□□ -1.54
USP25-208ENST00000478932 ACEP12821 1306 aa5.41□□□□□ -1.54
USP25-208ENST00000478932 ANKLE2Q86XL3 938 aa5.41□□□□□ -1.54
USP25-208ENST00000478932 SETD1AO15047 1707 aaKnown RBP5.41□□□□□ -1.54
USP25-208ENST00000478932 DIAPH1O60610 1272 aaKnown RBP5.41□□□□□ -1.54
USP25-208ENST00000478932 BCAR3O75815 825 aa5.41□□□□□ -1.54
USP25-208ENST00000478932 DLC1Q96QB1 1528 aa5.41□□□□□ -1.54
USP25-208ENST00000478932 TECPR2O15040 1411 aa5.4□□□□□ -1.54
USP25-208ENST00000478932 CPSF1Q10570 1443 aaKnown RBP5.4□□□□□ -1.54
USP25-208ENST00000478932 HMOX1P09601 288 aa5.4□□□□□ -1.54
USP25-208ENST00000478932 TRMT2AQ8IZ69 625 aaKnown RBP5.4□□□□□ -1.54
USP25-208ENST00000478932 COG3Q96JB2 828 aa5.4□□□□□ -1.54
USP25-208ENST00000478932 ZNF692Q9BU19 519 aaPredicted RBP5.4□□□□□ -1.54
USP25-208ENST00000478932 FER1L4A9Z1Z3 1794 aa5.4□□□□□ -1.55
USP25-208ENST00000478932 E9PSI1 815 aa5.4□□□□□ -1.55
USP25-208ENST00000478932 NGDNQ8NEJ9 315 aaKnown RBP5.4□□□□□ -1.55
USP25-208ENST00000478932 MED14O60244 1454 aa5.4□□□□□ -1.55
USP25-208ENST00000478932 ATXN8OSP0DMR3 200 aa5.39□□□□□ -1.55
USP25-208ENST00000478932 PHACTR3Q96KR7 559 aa5.39□□□□□ -1.55
USP25-208ENST00000478932 PLEKHF1Q96S99 279 aa5.39□□□□□ -1.55
USP25-208ENST00000478932 ARHGAP23Q9P227 1491 aa5.39□□□□□ -1.55
USP25-208ENST00000478932 PLEKHG3A1L390 1219 aa5.39□□□□□ -1.55
USP25-208ENST00000478932 TMPOP42166 694 aaKnown RBP5.39□□□□□ -1.55
USP25-208ENST00000478932 NUTM2GQ5VZR2 741 aa5.39□□□□□ -1.55
USP25-208ENST00000478932 ATF5Q9Y2D1 282 aaPredicted RBP5.39□□□□□ -1.55
USP25-208ENST00000478932 SLIT1O75093 1534 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 EDC4Q6P2E9 1401 aaKnown RBP5.38□□□□□ -1.55
USP25-208ENST00000478932 TTC21BQ7Z4L5 1316 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 ATP7BP35670 1465 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 PNPLA6Q8IY17 1366 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 PRKAR2BP31323 418 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 RIPK4P57078 832 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 NGEFQ8N5V2 710 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 TSR2Q969E8 191 aaKnown RBP5.38□□□□□ -1.55
USP25-208ENST00000478932 CRBNQ96SW2 442 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 BCL2L13Q9BXK5 485 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 SETD1BQ9UPS6 1966 aaKnown RBP5.38□□□□□ -1.55
USP25-208ENST00000478932 MAPK8IP3Q9UPT6 1336 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.38□□□□□ -1.55
USP25-208ENST00000478932 FCHSD2O94868 740 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 TRIM35Q9UPQ4 493 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 CPS1P31327 1500 aa5.38□□□□□ -1.55
USP25-208ENST00000478932 USP32Q8NFA0 1604 aa5.37□□□□□ -1.55
USP25-208ENST00000478932 PAK3O75914 559 aaPredicted RBP5.37□□□□□ -1.55
USP25-208ENST00000478932 PLEKHG5O94827 1062 aa5.37□□□□□ -1.55
USP25-208ENST00000478932 HSP90AB2PQ58FF8 381 aa5.37□□□□□ -1.55
USP25-208ENST00000478932 C14orf37Q86TY3 774 aa5.37□□□□□ -1.55
USP25-208ENST00000478932 FRAT1Q92837 279 aaPredicted RBP5.37□□□□□ -1.55
USP25-208ENST00000478932 THUMPD2Q9BTF0 503 aaKnown RBP5.37□□□□□ -1.55
USP25-208ENST00000478932 RBM19Q9Y4C8 960 aaKnown RBP5.37□□□□□ -1.55
USP25-208ENST00000478932 SHPRHQ149N8 1683 aa5.37□□□□□ -1.55
USP25-208ENST00000478932 IL13P35225 146 aa5.37□□□□□ -1.55
USP25-208ENST00000478932 SKAP1Q86WV1 359 aa5.37□□□□□ -1.55
USP25-208ENST00000478932 WDR63Q8IWG1 891 aa5.37□□□□□ -1.55
USP25-208ENST00000478932 RIMS1Q86UR5 1692 aaKnown RBP5.36□□□□□ -1.55
USP25-208ENST00000478932 NLRP6P59044 892 aa5.36□□□□□ -1.55
USP25-208ENST00000478932 CCDC27Q2M243 656 aa5.36□□□□□ -1.55
USP25-208ENST00000478932 RSPH6AQ9H0K4 717 aa5.36□□□□□ -1.55
USP25-208ENST00000478932 NKTRP30414 1462 aaKnown RBP5.36□□□□□ -1.55
USP25-208ENST00000478932 CEP170BQ9Y4F5 1589 aaPredicted RBP5.36□□□□□ -1.55
USP25-208ENST00000478932 MAP2P11137 1827 aaKnown RBP5.36□□□□□ -1.55
USP25-208ENST00000478932 ESCO1Q5FWF5 840 aa5.36□□□□□ -1.55
USP25-208ENST00000478932 AEBP1Q8IUX7 1158 aa5.36□□□□□ -1.55
USP25-208ENST00000478932 CLUAP1Q96AJ1 413 aa5.36□□□□□ -1.55
USP25-208ENST00000478932 LAS1LQ9Y4W2 734 aaKnown RBP5.36□□□□□ -1.55
USP25-208ENST00000478932 USP6P35125 1406 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 COL3A1P02461 1466 aaPredicted RBP5.35□□□□□ -1.55
USP25-208ENST00000478932 FOXO3O43524 673 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 NEFMP07197 916 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 RARSP54136 660 aaKnown RBP5.35□□□□□ -1.55
USP25-208ENST00000478932 HSPA2P54652 639 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms