RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.35□□□□□ -0.11
HLA-DMB-260ENST00000477537 FAM135BQ49AJ0 1406 aa14.34□□□□□ -0.11
HLA-DMB-260ENST00000477537 TCERG1O14776 1098 aaKnown RBP14.34□□□□□ -0.11
HLA-DMB-260ENST00000477537 CPS1P31327 1500 aa14.34□□□□□ -0.11
HLA-DMB-260ENST00000477537 TECPR2O15040 1411 aa14.34□□□□□ -0.11
HLA-DMB-260ENST00000477537 PPIP5K1Q6PFW1 1433 aa14.34□□□□□ -0.11
HLA-DMB-260ENST00000477537 THEMISQ8N1K5 641 aaPredicted RBP14.33□□□□□ -0.11
HLA-DMB-260ENST00000477537 SIRT1Q96EB6 747 aa14.33□□□□□ -0.11
HLA-DMB-260ENST00000477537 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
HLA-DMB-260ENST00000477537 ANP32EQ9BTT0 268 aa14.33□□□□□ -0.12
HLA-DMB-260ENST00000477537 DIAPH1O60610 1272 aaKnown RBP14.31□□□□□ -0.12
HLA-DMB-260ENST00000477537 PLEKHF1Q96S99 279 aa14.31□□□□□ -0.12
HLA-DMB-260ENST00000477537 CPSF1Q10570 1443 aaKnown RBP14.31□□□□□ -0.12
HLA-DMB-260ENST00000477537 LMTK3Q96Q04 1460 aa14.31□□□□□ -0.12
HLA-DMB-260ENST00000477537 NUDT16Q96DE0 195 aaKnown RBP14.31□□□□□ -0.12
HLA-DMB-260ENST00000477537 ADAMTS13Q76LX8 1427 aa14.31□□□□□ -0.12
HLA-DMB-260ENST00000477537 PNPLA6Q8IY17 1366 aa14.3□□□□□ -0.12
HLA-DMB-260ENST00000477537 SLIT1O75093 1534 aa14.3□□□□□ -0.12
HLA-DMB-260ENST00000477537 KDM2BQ8NHM5 1336 aa14.3□□□□□ -0.12
HLA-DMB-260ENST00000477537 EDC4Q6P2E9 1401 aaKnown RBP14.3□□□□□ -0.12
HLA-DMB-260ENST00000477537 ARHGAP23Q9P227 1491 aa14.3□□□□□ -0.12
HLA-DMB-260ENST00000477537 MAPK8IP3Q9UPT6 1336 aa14.3□□□□□ -0.12
HLA-DMB-260ENST00000477537 CDC42BPGQ6DT37 1551 aa14.29□□□□□ -0.12
HLA-DMB-260ENST00000477537 CANXP27824 592 aaKnown RBP14.29□□□□□ -0.12
HLA-DMB-260ENST00000477537 MYH16Q9H6N6 1097 aa14.29□□□□□ -0.12
HLA-DMB-260ENST00000477537 PLEKHG1Q9ULL1 1385 aa14.29□□□□□ -0.12
HLA-DMB-260ENST00000477537 MAP2P11137 1827 aaKnown RBP14.29□□□□□ -0.12
HLA-DMB-260ENST00000477537 MS4A1P11836 297 aa14.29□□□□□ -0.12
HLA-DMB-260ENST00000477537 CENPQQ7L2Z9 268 aaPredicted RBP14.29□□□□□ -0.12
HLA-DMB-260ENST00000477537 ROBO2Q9HCK4 1378 aa14.29□□□□□ -0.12
HLA-DMB-260ENST00000477537 NCKAP5LQ9HCH0 1330 aa14.28□□□□□ -0.12
HLA-DMB-260ENST00000477537 FBLN1P23142 703 aa14.28□□□□□ -0.12
HLA-DMB-260ENST00000477537 TMPOP42166 694 aaKnown RBP14.28□□□□□ -0.12
HLA-DMB-260ENST00000477537 RARSP54136 660 aaKnown RBP14.28□□□□□ -0.12
HLA-DMB-260ENST00000477537 POLKQ9UBT6 870 aa14.28□□□□□ -0.12
HLA-DMB-260ENST00000477537 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
HLA-DMB-260ENST00000477537 ITSN1Q15811 1721 aa14.28□□□□□ -0.12
HLA-DMB-260ENST00000477537 MON2Q7Z3U7 1717 aa14.28□□□□□ -0.12
HLA-DMB-260ENST00000477537 PPM1GO15355 546 aaPredicted RBP14.27□□□□□ -0.12
HLA-DMB-260ENST00000477537 PDE3AQ14432 1141 aa14.27□□□□□ -0.12
HLA-DMB-260ENST00000477537 SKAP1Q86WV1 359 aa14.27□□□□□ -0.12
HLA-DMB-260ENST00000477537 NME9Q86XW9 330 aa14.27□□□□□ -0.12
HLA-DMB-260ENST00000477537 EID1Q9Y6B2 187 aa14.27□□□□□ -0.12
HLA-DMB-260ENST00000477537 AKAP12Q02952 1782 aa14.27□□□□□ -0.12
HLA-DMB-260ENST00000477537 PNNQ9H307 717 aaKnown RBP14.27□□□□□ -0.13
HLA-DMB-260ENST00000477537 FRAT1Q92837 279 aaPredicted RBP14.26□□□□□ -0.13
HLA-DMB-260ENST00000477537 SLC26A8Q96RN1 970 aa14.26□□□□□ -0.13
HLA-DMB-260ENST00000477537 PRR36Q9H6K5 1346 aa14.26□□□□□ -0.13
HLA-DMB-260ENST00000477537 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.26□□□□□ -0.13
HLA-DMB-260ENST00000477537 PDE4AP27815 886 aa14.25□□□□□ -0.13
HLA-DMB-260ENST00000477537 PANK1Q8TE04 598 aa14.25□□□□□ -0.13
HLA-DMB-260ENST00000477537 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
HLA-DMB-260ENST00000477537 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
HLA-DMB-260ENST00000477537 ERICH6Q7L0X2 663 aa14.25□□□□□ -0.13
HLA-DMB-260ENST00000477537 ANKLE2Q86XL3 938 aa14.25□□□□□ -0.13
HLA-DMB-260ENST00000477537 RIPK4P57078 832 aa14.24□□□□□ -0.13
HLA-DMB-260ENST00000477537 LRRC7Q96NW7 1537 aa14.24□□□□□ -0.13
HLA-DMB-260ENST00000477537 FCHSD2O94868 740 aa14.23□□□□□ -0.13
HLA-DMB-260ENST00000477537 ANP32AP39687 249 aaKnown RBP14.23□□□□□ -0.13
HLA-DMB-260ENST00000477537 TSR2Q969E8 191 aaKnown RBP14.23□□□□□ -0.13
HLA-DMB-260ENST00000477537 COG3Q96JB2 828 aa14.23□□□□□ -0.13
HLA-DMB-260ENST00000477537 COG6Q9Y2V7 657 aa14.23□□□□□ -0.13
HLA-DMB-260ENST00000477537 EMILIN1Q9Y6C2 1016 aa14.23□□□□□ -0.13
HLA-DMB-260ENST00000477537 BCL2L13Q9BXK5 485 aa14.23□□□□□ -0.13
HLA-DMB-260ENST00000477537 BACH2Q9BYV9 841 aa14.23□□□□□ -0.13
HLA-DMB-260ENST00000477537 PTPRUQ92729 1446 aa14.22□□□□□ -0.13
HLA-DMB-260ENST00000477537 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
HLA-DMB-260ENST00000477537 RSPH6AQ9H0K4 717 aa14.22□□□□□ -0.13
HLA-DMB-260ENST00000477537 PRKAR2BP31323 418 aa14.21□□□□□ -0.13
HLA-DMB-260ENST00000477537 IL16Q14005 1332 aa14.21□□□□□ -0.13
HLA-DMB-260ENST00000477537 TOPAZ1Q8N9V7 1692 aa14.21□□□□□ -0.13
HLA-DMB-260ENST00000477537 AATKQ6ZMQ8 1374 aa14.21□□□□□ -0.13
HLA-DMB-260ENST00000477537 STRCQ7RTU9 1775 aa14.21□□□□□ -0.13
HLA-DMB-260ENST00000477537 CDK12Q9NYV4 1490 aaPredicted RBP14.21□□□□□ -0.13
HLA-DMB-260ENST00000477537 CT47B1P0C2W7 299 aaPredicted RBP14.21□□□□□ -0.14
HLA-DMB-260ENST00000477537 NEFMP07197 916 aa14.2□□□□□ -0.14
HLA-DMB-260ENST00000477537 EXOSC9Q06265 439 aaKnown RBP14.2□□□□□ -0.14
HLA-DMB-260ENST00000477537 CLUAP1Q96AJ1 413 aa14.2□□□□□ -0.14
HLA-DMB-260ENST00000477537 NUTM2FA1L443 756 aa14.19□□□□□ -0.14
HLA-DMB-260ENST00000477537 HMOX1P09601 288 aa14.19□□□□□ -0.14
HLA-DMB-260ENST00000477537 IL13P35225 146 aa14.19□□□□□ -0.14
HLA-DMB-260ENST00000477537 TNNQ9UQP3 1299 aa14.19□□□□□ -0.14
HLA-DMB-260ENST00000477537 AMOTL2Q9Y2J4 779 aa14.19□□□□□ -0.14
HLA-DMB-260ENST00000477537 NPHP4O75161 1426 aaPredicted RBP14.19□□□□□ -0.14
HLA-DMB-260ENST00000477537 RRS1Q15050 365 aaKnown RBP14.19□□□□□ -0.14
HLA-DMB-260ENST00000477537 NRKQ7Z2Y5 1582 aa14.18□□□□□ -0.14
HLA-DMB-260ENST00000477537 ACEP12821 1306 aa14.18□□□□□ -0.14
HLA-DMB-260ENST00000477537 RLBP1P12271 317 aa14.18□□□□□ -0.14
HLA-DMB-260ENST00000477537 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
HLA-DMB-260ENST00000477537 IPO9Q96P70 1041 aaKnown RBP14.18□□□□□ -0.14
HLA-DMB-260ENST00000477537 TBX22Q9Y458 520 aa14.18□□□□□ -0.14
HLA-DMB-260ENST00000477537 TTC21BQ7Z4L5 1316 aa14.17□□□□□ -0.14
HLA-DMB-260ENST00000477537 PLEKHG3A1L390 1219 aa14.17□□□□□ -0.14
HLA-DMB-260ENST00000477537 IGHDP01880 384 aa14.17□□□□□ -0.14
HLA-DMB-260ENST00000477537 NFE2L2Q16236 605 aa14.17□□□□□ -0.14
HLA-DMB-260ENST00000477537 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
HLA-DMB-260ENST00000477537 NOP58Q9Y2X3 529 aaKnown RBP14.17□□□□□ -0.14
HLA-DMB-260ENST00000477537 ZKSCAN2Q63HK3 967 aa14.16□□□□□ -0.14
HLA-DMB-260ENST00000477537 SMC4Q9NTJ3 1288 aa14.16□□□□□ -0.14
HLA-DMB-260ENST00000477537 DIP2AQ14689 1571 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms