RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TMEM132EQ6IEE7 984 aa19.32■□□□□ 0.68
CLSTN1-205ENST00000477264 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
CLSTN1-205ENST00000477264 ADAMTSL3P82987 1691 aa19.31■□□□□ 0.68
CLSTN1-205ENST00000477264 TRAK2O60296 914 aa19.3■□□□□ 0.68
CLSTN1-205ENST00000477264 CANXP27824 592 aaKnown RBP19.3■□□□□ 0.68
CLSTN1-205ENST00000477264 MYH16Q9H6N6 1097 aa19.3■□□□□ 0.68
CLSTN1-205ENST00000477264 ESPNB1AK53 854 aa19.3■□□□□ 0.68
CLSTN1-205ENST00000477264 PTMSP20962 102 aa19.3■□□□□ 0.68
CLSTN1-205ENST00000477264 TRAK1Q9UPV9 953 aa19.3■□□□□ 0.68
CLSTN1-205ENST00000477264 PANK2Q9BZ23 570 aa19.29■□□□□ 0.68
CLSTN1-205ENST00000477264 GRPEL1Q9HAV7 217 aa19.29■□□□□ 0.68
CLSTN1-205ENST00000477264 MYO3AQ8NEV4 1616 aa19.28■□□□□ 0.68
CLSTN1-205ENST00000477264 NCOA3Q9Y6Q9 1424 aa19.28■□□□□ 0.68
CLSTN1-205ENST00000477264 TMEM2Q9UHN6 1383 aa19.28■□□□□ 0.68
CLSTN1-205ENST00000477264 ALKQ9UM73 1620 aa19.27■□□□□ 0.68
CLSTN1-205ENST00000477264 APAF1O14727 1248 aa19.27■□□□□ 0.68
CLSTN1-205ENST00000477264 SPINK5Q9NQ38 1064 aaPredicted RBP19.26■□□□□ 0.67
CLSTN1-205ENST00000477264 COG6Q9Y2V7 657 aa19.25■□□□□ 0.67
CLSTN1-205ENST00000477264 RWDD1Q9H446 243 aaPredicted RBP19.25■□□□□ 0.67
CLSTN1-205ENST00000477264 SHPRHQ149N8 1683 aa19.24■□□□□ 0.67
CLSTN1-205ENST00000477264 TRIM44Q96DX7 344 aaPredicted RBP19.24■□□□□ 0.67
CLSTN1-205ENST00000477264 CCDC146Q8IYE0 955 aa19.23■□□□□ 0.67
CLSTN1-205ENST00000477264 THEMISQ8N1K5 641 aaPredicted RBP19.23■□□□□ 0.67
CLSTN1-205ENST00000477264 SBNO2Q9Y2G9 1366 aa19.23■□□□□ 0.67
CLSTN1-205ENST00000477264 ARHGEF28Q8N1W1 1705 aaKnown RBP19.23■□□□□ 0.67
CLSTN1-205ENST00000477264 PDZRN3Q9UPQ7 1066 aa19.23■□□□□ 0.67
CLSTN1-205ENST00000477264 EID1Q9Y6B2 187 aa19.23■□□□□ 0.67
CLSTN1-205ENST00000477264 QRICH2Q9H0J4 1663 aa19.23■□□□□ 0.67
CLSTN1-205ENST00000477264 PANK1Q8TE04 598 aa19.22■□□□□ 0.67
CLSTN1-205ENST00000477264 HSCBQ8IWL3 235 aa19.22■□□□□ 0.67
CLSTN1-205ENST00000477264 STK26Q9P289 416 aa19.22■□□□□ 0.67
CLSTN1-205ENST00000477264 CIZ1Q9ULV3 898 aaPredicted RBP19.22■□□□□ 0.67
CLSTN1-205ENST00000477264 POLR3AO14802 1390 aaPredicted RBP19.22■□□□□ 0.67
CLSTN1-205ENST00000477264 IQSEC2Q5JU85 1478 aa19.21■□□□□ 0.67
CLSTN1-205ENST00000477264 SKOR2Q2VWA4 1001 aaPredicted RBP19.21■□□□□ 0.67
CLSTN1-205ENST00000477264 GZF1Q9H116 711 aaPredicted RBP19.21■□□□□ 0.67
CLSTN1-205ENST00000477264 YTHDC2Q9H6S0 1430 aaKnown RBP19.21■□□□□ 0.67
CLSTN1-205ENST00000477264 ARXQ96QS3 562 aa19.2■□□□□ 0.66
CLSTN1-205ENST00000477264 C22orf23Q9BZE7 217 aa19.2■□□□□ 0.66
CLSTN1-205ENST00000477264 PDCL3Q9H2J4 239 aa19.2■□□□□ 0.66
CLSTN1-205ENST00000477264 TXNDC2Q86VQ3 553 aa19.19■□□□□ 0.66
CLSTN1-205ENST00000477264 CEP170BQ9Y4F5 1589 aaPredicted RBP19.19■□□□□ 0.66
CLSTN1-205ENST00000477264 NRXN3Q9Y4C0 1643 aa19.19■□□□□ 0.66
CLSTN1-205ENST00000477264 SLIT1O75093 1534 aa19.19■□□□□ 0.66
CLSTN1-205ENST00000477264 SETD1AO15047 1707 aaKnown RBP19.19■□□□□ 0.66
CLSTN1-205ENST00000477264 SETD1BQ9UPS6 1966 aaKnown RBP19.18■□□□□ 0.66
CLSTN1-205ENST00000477264 GBP4Q96PP9 640 aa19.17■□□□□ 0.66
CLSTN1-205ENST00000477264 ZNF692Q9BU19 519 aaPredicted RBP19.17■□□□□ 0.66
CLSTN1-205ENST00000477264 PTPRMP28827 1452 aa19.17■□□□□ 0.66
CLSTN1-205ENST00000477264 RARSP54136 660 aaKnown RBP19.17■□□□□ 0.66
CLSTN1-205ENST00000477264 TERF1P54274 439 aa19.17■□□□□ 0.66
CLSTN1-205ENST00000477264 WWC1Q8IX03 1113 aa19.17■□□□□ 0.66
CLSTN1-205ENST00000477264 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
CLSTN1-205ENST00000477264 LTKP29376 864 aa19.16■□□□□ 0.66
CLSTN1-205ENST00000477264 PCDHB15Q9Y5E8 787 aa19.16■□□□□ 0.66
CLSTN1-205ENST00000477264 ERBB4Q15303 1308 aa19.16■□□□□ 0.66
CLSTN1-205ENST00000477264 PLEKHG1Q9ULL1 1385 aa19.16■□□□□ 0.66
CLSTN1-205ENST00000477264 DDIT3P35638 169 aa19.16■□□□□ 0.66
CLSTN1-205ENST00000477264 NCBP3Q53F19 620 aaKnown RBP19.16■□□□□ 0.66
CLSTN1-205ENST00000477264 SNX21Q969T3 373 aa19.16■□□□□ 0.66
CLSTN1-205ENST00000477264 CCDC173Q0VFZ6 552 aa19.15■□□□□ 0.66
CLSTN1-205ENST00000477264 IBTKQ9P2D0 1353 aaPredicted RBP19.14■□□□□ 0.65
CLSTN1-205ENST00000477264 ZNF142P52746 1687 aaPredicted RBP19.13■□□□□ 0.65
CLSTN1-205ENST00000477264 SAFB2Q14151 953 aaKnown RBP eCLIP19.13■□□□□ 0.65
CLSTN1-205ENST00000477264 WDR63Q8IWG1 891 aa19.13■□□□□ 0.65
CLSTN1-205ENST00000477264 USP32Q8NFA0 1604 aa19.13■□□□□ 0.65
CLSTN1-205ENST00000477264 EVC2Q86UK5 1308 aa19.13■□□□□ 0.65
CLSTN1-205ENST00000477264 PRAM1Q96QH2 718 aa19.13■□□□□ 0.65
CLSTN1-205ENST00000477264 DMRT2Q9Y5R5 561 aa19.13■□□□□ 0.65
CLSTN1-205ENST00000477264 SMC5Q8IY18 1101 aa19.12■□□□□ 0.65
CLSTN1-205ENST00000477264 MAP7D2Q96T17 732 aa19.12■□□□□ 0.65
CLSTN1-205ENST00000477264 METP08581 1390 aa19.12■□□□□ 0.65
CLSTN1-205ENST00000477264 DLC1Q96QB1 1528 aa19.11■□□□□ 0.65
CLSTN1-205ENST00000477264 CALD1Q05682 793 aaKnown RBP19.11■□□□□ 0.65
CLSTN1-205ENST00000477264 PPP1R9BQ96SB3 815 aa19.11■□□□□ 0.65
CLSTN1-205ENST00000477264 PHF23Q9BUL5 403 aaPredicted RBP19.11■□□□□ 0.65
CLSTN1-205ENST00000477264 ABCC11Q96J66 1382 aa19.11■□□□□ 0.65
CLSTN1-205ENST00000477264 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.1■□□□□ 0.65
CLSTN1-205ENST00000477264 RBM25P49756 843 aaKnown RBP19.1■□□□□ 0.65
CLSTN1-205ENST00000477264 MVPQ14764 893 aaKnown RBP19.1■□□□□ 0.65
CLSTN1-205ENST00000477264 CCDC27Q2M243 656 aa19.1■□□□□ 0.65
CLSTN1-205ENST00000477264 CT47B1P0C2W7 299 aaPredicted RBP19.09■□□□□ 0.65
CLSTN1-205ENST00000477264 MFAP1P55081 439 aaKnown RBP19.09■□□□□ 0.65
CLSTN1-205ENST00000477264 SPRYD3Q8NCJ5 442 aa19.09■□□□□ 0.65
CLSTN1-205ENST00000477264 ADAMTS13Q76LX8 1427 aa19.09■□□□□ 0.65
CLSTN1-205ENST00000477264 RUNDC1Q96C34 613 aa19.09■□□□□ 0.65
CLSTN1-205ENST00000477264 ADGRB2O60241 1585 aa19.08■□□□□ 0.65
CLSTN1-205ENST00000477264 HDAC1Q13547 482 aaPredicted RBP19.08■□□□□ 0.65
CLSTN1-205ENST00000477264 RAB3GAP1Q15042 981 aa19.08■□□□□ 0.65
CLSTN1-205ENST00000477264 ZSCAN30Q86W11 494 aa19.08■□□□□ 0.65
CLSTN1-205ENST00000477264 ANP32BQ92688 251 aaKnown RBP19.08■□□□□ 0.65
CLSTN1-205ENST00000477264 RLBP1P12271 317 aa19.08■□□□□ 0.64
CLSTN1-205ENST00000477264 KNDC1Q76NI1 1749 aa19.07■□□□□ 0.64
CLSTN1-205ENST00000477264 PUS7Q96PZ0 661 aaKnown RBP19.07■□□□□ 0.64
CLSTN1-205ENST00000477264 MINK1Q8N4C8 1332 aaPredicted RBP19.07■□□□□ 0.64
CLSTN1-205ENST00000477264 TULP4Q9NRJ4 1543 aa19.07■□□□□ 0.64
CLSTN1-205ENST00000477264 OFD1O75665 1012 aa19.06■□□□□ 0.64
CLSTN1-205ENST00000477264 KIAA1211Q6ZU35 1233 aa19.06■□□□□ 0.64
CLSTN1-205ENST00000477264 SLC26A8Q96RN1 970 aa19.06■□□□□ 0.64
CLSTN1-205ENST00000477264 ANKLE2Q86XL3 938 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms