RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 TESK2Q96S53 571 aa18.92■□□□□ 0.62
ACTN4-205ENST00000477174 QTRT2Q9H974 415 aaKnown RBP18.92■□□□□ 0.62
ACTN4-205ENST00000477174 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
ACTN4-205ENST00000477174 RXRBP28702 533 aa18.91■□□□□ 0.62
ACTN4-205ENST00000477174 USP21Q9UK80 565 aa18.91■□□□□ 0.62
ACTN4-205ENST00000477174 PLEKHG5O94827 1062 aa18.89■□□□□ 0.61
ACTN4-205ENST00000477174 ABTB2Q8N961 1025 aa18.89■□□□□ 0.61
ACTN4-205ENST00000477174 TRPC5Q9UL62 973 aaPredicted RBP18.88■□□□□ 0.61
ACTN4-205ENST00000477174 USP47Q96K76 1375 aa18.88■□□□□ 0.61
ACTN4-205ENST00000477174 TOPAZ1Q8N9V7 1692 aa18.88■□□□□ 0.61
ACTN4-205ENST00000477174 TRPM3Q9HCF6 1732 aaPredicted RBP18.87■□□□□ 0.61
ACTN4-205ENST00000477174 FAM83GA6ND36 823 aa18.86■□□□□ 0.61
ACTN4-205ENST00000477174 RBM6P78332 1123 aaKnown RBP18.86■□□□□ 0.61
ACTN4-205ENST00000477174 NLRP13Q86W25 1043 aa18.86■□□□□ 0.61
ACTN4-205ENST00000477174 USP6P35125 1406 aa18.85■□□□□ 0.61
ACTN4-205ENST00000477174 UNC5CLQ8IV45 518 aa18.85■□□□□ 0.61
ACTN4-205ENST00000477174 TMC1Q8TDI8 760 aa18.85■□□□□ 0.61
ACTN4-205ENST00000477174 TMF1P82094 1093 aa18.84■□□□□ 0.61
ACTN4-205ENST00000477174 NUTM2GQ5VZR2 741 aa18.84■□□□□ 0.61
ACTN4-205ENST00000477174 SLC12A5Q9H2X9 1139 aa18.84■□□□□ 0.61
ACTN4-205ENST00000477174 BCL9LQ86UU0 1499 aa18.84■□□□□ 0.61
ACTN4-205ENST00000477174 ALS2Q96Q42 1657 aa18.83■□□□□ 0.61
ACTN4-205ENST00000477174 CDCA8Q53HL2 280 aa18.83■□□□□ 0.6
ACTN4-205ENST00000477174 CPSF1Q10570 1443 aaKnown RBP18.83■□□□□ 0.6
ACTN4-205ENST00000477174 NLRP6P59044 892 aa18.82■□□□□ 0.6
ACTN4-205ENST00000477174 TERF2IPQ9NYB0 399 aa18.82■□□□□ 0.6
ACTN4-205ENST00000477174 SSH2Q76I76 1423 aa18.82■□□□□ 0.6
ACTN4-205ENST00000477174 SLIT2O94813 1529 aa18.81■□□□□ 0.6
ACTN4-205ENST00000477174 HDGFL2Q7Z4V5 671 aaPredicted RBP18.81■□□□□ 0.6
ACTN4-205ENST00000477174 KTN1Q86UP2 1357 aaKnown RBP18.81■□□□□ 0.6
ACTN4-205ENST00000477174 TTC21BQ7Z4L5 1316 aa18.8■□□□□ 0.6
ACTN4-205ENST00000477174 TTC21AQ8NDW8 1320 aa18.8■□□□□ 0.6
ACTN4-205ENST00000477174 GJD4Q96KN9 370 aaPredicted RBP18.8■□□□□ 0.6
ACTN4-205ENST00000477174 NINLQ9Y2I6 1382 aa18.8■□□□□ 0.6
ACTN4-205ENST00000477174 USP19O94966 1318 aa18.79■□□□□ 0.6
ACTN4-205ENST00000477174 GCP02774 474 aa18.79■□□□□ 0.6
ACTN4-205ENST00000477174 PRDM11Q9NQV5 511 aa18.79■□□□□ 0.6
ACTN4-205ENST00000477174 ATRNO75882 1429 aa18.79■□□□□ 0.6
ACTN4-205ENST00000477174 CDK12Q9NYV4 1490 aaPredicted RBP18.78■□□□□ 0.6
ACTN4-205ENST00000477174 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
ACTN4-205ENST00000477174 ZC3H6P61129 1189 aaKnown RBP18.77■□□□□ 0.6
ACTN4-205ENST00000477174 VPS72Q15906 364 aa18.77■□□□□ 0.6
ACTN4-205ENST00000477174 BTG4Q9NY30 223 aa18.77■□□□□ 0.6
ACTN4-205ENST00000477174 MARF1Q9Y4F3 1742 aaKnown RBP18.76■□□□□ 0.59
ACTN4-205ENST00000477174 KIAA0232Q92628 1395 aa18.76■□□□□ 0.59
ACTN4-205ENST00000477174 CPDO75976 1380 aa18.75■□□□□ 0.59
ACTN4-205ENST00000477174 CD163L1Q9NR16 1453 aa18.74■□□□□ 0.59
ACTN4-205ENST00000477174 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.74■□□□□ 0.59
ACTN4-205ENST00000477174 KCNH5Q8NCM2 988 aa18.74■□□□□ 0.59
ACTN4-205ENST00000477174 CHRNA2Q15822 529 aa18.73■□□□□ 0.59
ACTN4-205ENST00000477174 A0A1W2PP64 1363 aa18.71■□□□□ 0.59
ACTN4-205ENST00000477174 ONECUT3O60422 494 aaPredicted RBP18.71■□□□□ 0.59
ACTN4-205ENST00000477174 HSPA5P11021 654 aaKnown RBP18.71■□□□□ 0.59
ACTN4-205ENST00000477174 CCDC9Q9Y3X0 531 aaKnown RBP18.71■□□□□ 0.59
ACTN4-205ENST00000477174 EDC4Q6P2E9 1401 aaKnown RBP18.71■□□□□ 0.59
ACTN4-205ENST00000477174 ABCA3Q99758 1704 aa18.71■□□□□ 0.59
ACTN4-205ENST00000477174 USP31Q70CQ4 1352 aa18.7■□□□□ 0.58
ACTN4-205ENST00000477174 EVA1CP58658 441 aa18.69■□□□□ 0.58
ACTN4-205ENST00000477174 NME9Q86XW9 330 aa18.69■□□□□ 0.58
ACTN4-205ENST00000477174 ANKRD36BQ8N2N9 1353 aa18.68■□□□□ 0.58
ACTN4-205ENST00000477174 COL14A1Q05707 1796 aaKnown RBP18.68■□□□□ 0.58
ACTN4-205ENST00000477174 RGS12O14924 1447 aa18.68■□□□□ 0.58
ACTN4-205ENST00000477174 CRYBG1Q9Y4K1 1723 aa18.68■□□□□ 0.58
ACTN4-205ENST00000477174 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
ACTN4-205ENST00000477174 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.67■□□□□ 0.58
ACTN4-205ENST00000477174 NWD2Q9ULI1 1742 aa18.67■□□□□ 0.58
ACTN4-205ENST00000477174 ARHGEF25Q86VW2 580 aa18.67■□□□□ 0.58
ACTN4-205ENST00000477174 ZRANB1Q9UGI0 708 aa18.67■□□□□ 0.58
ACTN4-205ENST00000477174 SPATA31A5Q5VU36 1347 aa18.67■□□□□ 0.58
ACTN4-205ENST00000477174 SPATA31A7Q8IWB4 1347 aa18.67■□□□□ 0.58
ACTN4-205ENST00000477174 AATKQ6ZMQ8 1374 aa18.67■□□□□ 0.58
ACTN4-205ENST00000477174 SLIT3O75094 1523 aa18.66■□□□□ 0.58
ACTN4-205ENST00000477174 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
ACTN4-205ENST00000477174 PHRF1Q9P1Y6 1649 aaKnown RBP18.65■□□□□ 0.58
ACTN4-205ENST00000477174 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.58
ACTN4-205ENST00000477174 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
ACTN4-205ENST00000477174 PLCH1Q4KWH8 1693 aa18.64■□□□□ 0.57
ACTN4-205ENST00000477174 SEPT12Q8IYM1 358 aa18.64■□□□□ 0.57
ACTN4-205ENST00000477174 MON2Q7Z3U7 1717 aa18.63■□□□□ 0.57
ACTN4-205ENST00000477174 ZBTB7CA1YPR0 619 aa18.63■□□□□ 0.57
ACTN4-205ENST00000477174 SOX12O15370 315 aa18.63■□□□□ 0.57
ACTN4-205ENST00000477174 SPATA31A1Q5TZJ5 1347 aa18.63■□□□□ 0.57
ACTN4-205ENST00000477174 UPF1Q92900 1129 aaKnown RBP eCLIP18.62■□□□□ 0.573e-26■■■■■ 28.8
ACTN4-205ENST00000477174 COG3Q96JB2 828 aa18.62■□□□□ 0.57
ACTN4-205ENST00000477174 CAMTA1Q9Y6Y1 1673 aa18.61■□□□□ 0.57
ACTN4-205ENST00000477174 GLI3P10071 1580 aa18.61■□□□□ 0.57
ACTN4-205ENST00000477174 FYB1O15117 783 aa18.61■□□□□ 0.57
ACTN4-205ENST00000477174 FAM98CQ17RN3 349 aaKnown RBP18.61■□□□□ 0.57
ACTN4-205ENST00000477174 LARP1Q6PKG0 1096 aaKnown RBP18.61■□□□□ 0.57
ACTN4-205ENST00000477174 CARD14Q9BXL6 1004 aa18.61■□□□□ 0.57
ACTN4-205ENST00000477174 AXIN2Q9Y2T1 843 aa18.61■□□□□ 0.57
ACTN4-205ENST00000477174 BARGINQ6ZT62 677 aa18.59■□□□□ 0.57
ACTN4-205ENST00000477174 POLR3GLQ9BT43 218 aa18.59■□□□□ 0.57
ACTN4-205ENST00000477174 THRAP3Q9Y2W1 955 aaKnown RBP18.59■□□□□ 0.57
ACTN4-205ENST00000477174 TCP11L2Q8N4U5 519 aa18.58■□□□□ 0.56
ACTN4-205ENST00000477174 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
ACTN4-205ENST00000477174 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
ACTN4-205ENST00000477174 NRAPQ86VF7 1730 aa18.57■□□□□ 0.56
ACTN4-205ENST00000477174 A0A0G2JS52 829 aa18.57■□□□□ 0.56
ACTN4-205ENST00000477174 C11orf95C9JLR9 678 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms