RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 POLR3AO14802 1390 aaPredicted RBP17.64■□□□□ 0.41
APTX-220ENST00000476858 PLEKHG3A1L390 1219 aa17.63■□□□□ 0.41
APTX-220ENST00000476858 POTEAQ6S8J7 498 aa17.63■□□□□ 0.41
APTX-220ENST00000476858 EVC2Q86UK5 1308 aa17.63■□□□□ 0.41
APTX-220ENST00000476858 SBNO2Q9Y2G9 1366 aa17.63■□□□□ 0.41
APTX-220ENST00000476858 SBNO1A3KN83 1393 aa17.62■□□□□ 0.41
APTX-220ENST00000476858 LMOD2Q6P5Q4 547 aa17.61■□□□□ 0.41
APTX-220ENST00000476858 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
APTX-220ENST00000476858 MEX3CQ5U5Q3 659 aaKnown RBP17.6■□□□□ 0.41
APTX-220ENST00000476858 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
APTX-220ENST00000476858 CRYBG1Q9Y4K1 1723 aa17.58■□□□□ 0.41
APTX-220ENST00000476858 CD163L1Q9NR16 1453 aa17.58■□□□□ 0.41
APTX-220ENST00000476858 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.4
APTX-220ENST00000476858 C8orf37Q96NL8 207 aa17.58■□□□□ 0.4
APTX-220ENST00000476858 AFF2P51816 1311 aa17.57■□□□□ 0.4
APTX-220ENST00000476858 SLC12A5Q9H2X9 1139 aa17.56■□□□□ 0.4
APTX-220ENST00000476858 SSH2Q76I76 1423 aa17.55■□□□□ 0.4
APTX-220ENST00000476858 AKAP12Q02952 1782 aa17.55■□□□□ 0.4
APTX-220ENST00000476858 USP6P35125 1406 aa17.55■□□□□ 0.4
APTX-220ENST00000476858 HSPA5P11021 654 aaKnown RBP17.54■□□□□ 0.4
APTX-220ENST00000476858 MARF1Q9Y4F3 1742 aaKnown RBP17.54■□□□□ 0.4
APTX-220ENST00000476858 CPSF1Q10570 1443 aaKnown RBP17.54■□□□□ 0.4
APTX-220ENST00000476858 NRKQ7Z2Y5 1582 aa17.53■□□□□ 0.4
APTX-220ENST00000476858 ARHGEF10O15013 1369 aa17.53■□□□□ 0.4
APTX-220ENST00000476858 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
APTX-220ENST00000476858 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.4
APTX-220ENST00000476858 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
APTX-220ENST00000476858 PHRF1Q9P1Y6 1649 aaKnown RBP17.51■□□□□ 0.39
APTX-220ENST00000476858 TMC1Q8TDI8 760 aa17.51■□□□□ 0.39
APTX-220ENST00000476858 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
APTX-220ENST00000476858 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
APTX-220ENST00000476858 MON2Q7Z3U7 1717 aa17.5■□□□□ 0.39
APTX-220ENST00000476858 A0A1W2PP64 1363 aa17.49■□□□□ 0.39
APTX-220ENST00000476858 TTC21BQ7Z4L5 1316 aa17.48■□□□□ 0.39
APTX-220ENST00000476858 FAM83GA6ND36 823 aa17.48■□□□□ 0.39
APTX-220ENST00000476858 C11orf95C9JLR9 678 aaPredicted RBP17.48■□□□□ 0.39
APTX-220ENST00000476858 FNBP4Q8N3X1 1017 aaPredicted RBP17.48■□□□□ 0.39
APTX-220ENST00000476858 ABTB2Q8N961 1025 aa17.48■□□□□ 0.39
APTX-220ENST00000476858 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
APTX-220ENST00000476858 MYOM1P52179 1685 aa17.48■□□□□ 0.39
APTX-220ENST00000476858 PLCH1Q4KWH8 1693 aa17.47■□□□□ 0.39
APTX-220ENST00000476858 SLIT2O94813 1529 aa17.47■□□□□ 0.39
APTX-220ENST00000476858 USP19O94966 1318 aa17.47■□□□□ 0.39
APTX-220ENST00000476858 HAP1P54257 671 aaPredicted RBP17.46■□□□□ 0.39
APTX-220ENST00000476858 TMF1P82094 1093 aa17.46■□□□□ 0.39
APTX-220ENST00000476858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■■■□□ 17.9
APTX-220ENST00000476858 USP21Q9UK80 565 aa17.46■□□□□ 0.39
APTX-220ENST00000476858 ZC3H6P61129 1189 aaKnown RBP17.45■□□□□ 0.38
APTX-220ENST00000476858 EIF4G2P78344 907 aaKnown RBP eCLIP17.45■□□□□ 0.38
APTX-220ENST00000476858 CHRNA2Q15822 529 aa17.45■□□□□ 0.38
APTX-220ENST00000476858 NME9Q86XW9 330 aa17.45■□□□□ 0.38
APTX-220ENST00000476858 QTRT2Q9H974 415 aaKnown RBP17.45■□□□□ 0.38
APTX-220ENST00000476858 KIAA0232Q92628 1395 aa17.44■□□□□ 0.38
APTX-220ENST00000476858 ZNF772Q68DY9 489 aaPredicted RBP17.44■□□□□ 0.38
APTX-220ENST00000476858 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
APTX-220ENST00000476858 ATRNO75882 1429 aa17.43■□□□□ 0.38
APTX-220ENST00000476858 SLIT3O75094 1523 aa17.42■□□□□ 0.38
APTX-220ENST00000476858 NRAPQ86VF7 1730 aa17.42■□□□□ 0.38
APTX-220ENST00000476858 NLRP6P59044 892 aa17.42■□□□□ 0.38
APTX-220ENST00000476858 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
APTX-220ENST00000476858 SOX12O15370 315 aa17.4■□□□□ 0.38
APTX-220ENST00000476858 GCP02774 474 aa17.4■□□□□ 0.38
APTX-220ENST00000476858 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
APTX-220ENST00000476858 GLI3P10071 1580 aa17.4■□□□□ 0.38
APTX-220ENST00000476858 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
APTX-220ENST00000476858 EDC4Q6P2E9 1401 aaKnown RBP17.39■□□□□ 0.38
APTX-220ENST00000476858 COL14A1Q05707 1796 aaKnown RBP17.39■□□□□ 0.37
APTX-220ENST00000476858 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
APTX-220ENST00000476858 NLRP13Q86W25 1043 aa17.39■□□□□ 0.37
APTX-220ENST00000476858 CARD14Q9BXL6 1004 aa17.39■□□□□ 0.37
APTX-220ENST00000476858 BTG4Q9NY30 223 aa17.39■□□□□ 0.37
APTX-220ENST00000476858 U3KPZ7 1027 aaPredicted RBP17.39■□□□□ 0.37
APTX-220ENST00000476858 RGS12O14924 1447 aa17.38■□□□□ 0.37
APTX-220ENST00000476858 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
APTX-220ENST00000476858 UNC5CLQ8IV45 518 aa17.38■□□□□ 0.37
APTX-220ENST00000476858 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
APTX-220ENST00000476858 TERF2IPQ9NYB0 399 aa17.38■□□□□ 0.37
APTX-220ENST00000476858 TTC21AQ8NDW8 1320 aa17.38■□□□□ 0.37
APTX-220ENST00000476858 ANKRD36BQ8N2N9 1353 aa17.38■□□□□ 0.37
APTX-220ENST00000476858 NFAT5O94916 1531 aa17.37■□□□□ 0.37
APTX-220ENST00000476858 LMO7Q8WWI1 1683 aa17.37■□□□□ 0.37
APTX-220ENST00000476858 CAMTA1Q9Y6Y1 1673 aa17.37■□□□□ 0.37
APTX-220ENST00000476858 ZBTB7CA1YPR0 619 aa17.37■□□□□ 0.37
APTX-220ENST00000476858 FBLN1P23142 703 aa17.37■□□□□ 0.37
APTX-220ENST00000476858 RXRBP28702 533 aa17.37■□□□□ 0.37
APTX-220ENST00000476858 NWD2Q9ULI1 1742 aa17.37■□□□□ 0.37
APTX-220ENST00000476858 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
APTX-220ENST00000476858 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
APTX-220ENST00000476858 NINLQ9Y2I6 1382 aa17.36■□□□□ 0.37
APTX-220ENST00000476858 RBM6P78332 1123 aaKnown RBP17.35■□□□□ 0.37
APTX-220ENST00000476858 USP31Q70CQ4 1352 aa17.35■□□□□ 0.37
APTX-220ENST00000476858 OVOS2A0A0J9YW53 1432 aa17.35■□□□□ 0.37
APTX-220ENST00000476858 OVOS2Q6IE36 1432 aa17.35■□□□□ 0.37
APTX-220ENST00000476858 COL18A1P39060 1754 aa17.35■□□□□ 0.37
APTX-220ENST00000476858 CPDO75976 1380 aa17.34■□□□□ 0.37
APTX-220ENST00000476858 SOCS7O14512 581 aa17.33■□□□□ 0.36
APTX-220ENST00000476858 SLC24A1O60721 1099 aa17.33■□□□□ 0.36
APTX-220ENST00000476858 GJD4Q96KN9 370 aaPredicted RBP17.33■□□□□ 0.36
APTX-220ENST00000476858 AXIN2Q9Y2T1 843 aa17.33■□□□□ 0.36
APTX-220ENST00000476858 NSD3Q9BZ95 1437 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms