RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 ATP7BP35670 1465 aa20.68■□□□□ 0.9
VARS2-207ENST00000476162 ADGRB2O60241 1585 aa20.68■□□□□ 0.9
VARS2-207ENST00000476162 ANP32AP39687 249 aaKnown RBP20.68■□□□□ 0.9
VARS2-207ENST00000476162 RARSP54136 660 aaKnown RBP20.68■□□□□ 0.9
VARS2-207ENST00000476162 DIAPH1O60610 1272 aaKnown RBP20.67■□□□□ 0.9
VARS2-207ENST00000476162 CANXP27824 592 aaKnown RBP20.67■□□□□ 0.9
VARS2-207ENST00000476162 BACH2Q9BYV9 841 aa20.67■□□□□ 0.9
VARS2-207ENST00000476162 PNPLA6Q8IY17 1366 aa20.66■□□□□ 0.9
VARS2-207ENST00000476162 TMEM2Q9UHN6 1383 aa20.66■□□□□ 0.9
VARS2-207ENST00000476162 FBLN1P23142 703 aa20.66■□□□□ 0.9
VARS2-207ENST00000476162 MYH16Q9H6N6 1097 aa20.66■□□□□ 0.9
VARS2-207ENST00000476162 TMPOP42166 694 aaKnown RBP20.65■□□□□ 0.9
VARS2-207ENST00000476162 FRAT1Q92837 279 aaPredicted RBP20.65■□□□□ 0.9
VARS2-207ENST00000476162 KIF20BQ96Q89 1820 aa20.65■□□□□ 0.9
VARS2-207ENST00000476162 PANK1Q8TE04 598 aa20.65■□□□□ 0.9
VARS2-207ENST00000476162 PPIP5K1Q6PFW1 1433 aa20.64■□□□□ 0.89
VARS2-207ENST00000476162 RTL5Q5HYW3 569 aaPredicted RBP20.64■□□□□ 0.89
VARS2-207ENST00000476162 SIRT1Q96EB6 747 aa20.64■□□□□ 0.89
VARS2-207ENST00000476162 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.64■□□□□ 0.89
VARS2-207ENST00000476162 MAPK8IP3Q9UPT6 1336 aa20.64■□□□□ 0.89
VARS2-207ENST00000476162 POLKQ9UBT6 870 aa20.63■□□□□ 0.89
VARS2-207ENST00000476162 CPSF1Q10570 1443 aaKnown RBP20.63■□□□□ 0.89
VARS2-207ENST00000476162 FAM135BQ49AJ0 1406 aa20.63■□□□□ 0.89
VARS2-207ENST00000476162 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
VARS2-207ENST00000476162 NUDT16Q96DE0 195 aaKnown RBP20.63■□□□□ 0.89
VARS2-207ENST00000476162 COG6Q9Y2V7 657 aa20.63■□□□□ 0.89
VARS2-207ENST00000476162 NCKAP5LQ9HCH0 1330 aa20.63■□□□□ 0.89
VARS2-207ENST00000476162 TRIM35Q9UPQ4 493 aa20.62■□□□□ 0.89
VARS2-207ENST00000476162 TECPR2O15040 1411 aa20.62■□□□□ 0.89
VARS2-207ENST00000476162 IPO9Q96P70 1041 aaKnown RBP20.62■□□□□ 0.89
VARS2-207ENST00000476162 BCL2L13Q9BXK5 485 aa20.62■□□□□ 0.89
VARS2-207ENST00000476162 RTN4Q9NQC3 1192 aaKnown RBP20.62■□□□□ 0.89
VARS2-207ENST00000476162 UBR1Q8IWV7 1749 aa20.61■□□□□ 0.89
VARS2-207ENST00000476162 CCDC61Q9Y6R9 512 aa20.61■□□□□ 0.89
VARS2-207ENST00000476162 EDC4Q6P2E9 1401 aaKnown RBP20.6■□□□□ 0.89
VARS2-207ENST00000476162 CEBPAP49715 358 aaPredicted RBP20.6■□□□□ 0.89
VARS2-207ENST00000476162 TSR2Q969E8 191 aaKnown RBP20.6■□□□□ 0.89
VARS2-207ENST00000476162 NME9Q86XW9 330 aa20.59■□□□□ 0.89
VARS2-207ENST00000476162 NPM2Q86SE8 214 aaKnown RBP20.59■□□□□ 0.89
VARS2-207ENST00000476162 KNDC1Q76NI1 1749 aa20.59■□□□□ 0.89
VARS2-207ENST00000476162 LTKP29376 864 aa20.58■□□□□ 0.89
VARS2-207ENST00000476162 RIPK4P57078 832 aa20.58■□□□□ 0.89
VARS2-207ENST00000476162 PNNQ9H307 717 aaKnown RBP20.58■□□□□ 0.89
VARS2-207ENST00000476162 ADAMTS13Q76LX8 1427 aa20.58■□□□□ 0.89
VARS2-207ENST00000476162 ROBO2Q9HCK4 1378 aa20.58■□□□□ 0.88
VARS2-207ENST00000476162 CLUAP1Q96AJ1 413 aa20.58■□□□□ 0.88
VARS2-207ENST00000476162 ZRANB1Q9UGI0 708 aa20.58■□□□□ 0.88
VARS2-207ENST00000476162 CPS1P31327 1500 aa20.58■□□□□ 0.88
VARS2-207ENST00000476162 FCHSD2O94868 740 aa20.57■□□□□ 0.88
VARS2-207ENST00000476162 IGHDP01880 384 aa20.57■□□□□ 0.88
VARS2-207ENST00000476162 TNNQ9UQP3 1299 aa20.57■□□□□ 0.88
VARS2-207ENST00000476162 RLBP1P12271 317 aa20.56■□□□□ 0.88
VARS2-207ENST00000476162 EMILIN1Q9Y6C2 1016 aa20.55■□□□□ 0.88
VARS2-207ENST00000476162 PRR36Q9H6K5 1346 aa20.55■□□□□ 0.88
VARS2-207ENST00000476162 EXOSC9Q06265 439 aaKnown RBP20.54■□□□□ 0.88
VARS2-207ENST00000476162 RSPH6AQ9H0K4 717 aa20.54■□□□□ 0.88
VARS2-207ENST00000476162 CDC42BPGQ6DT37 1551 aa20.54■□□□□ 0.88
VARS2-207ENST00000476162 PRKAR2BP31323 418 aa20.54■□□□□ 0.88
VARS2-207ENST00000476162 PLEKHG1Q9ULL1 1385 aa20.54■□□□□ 0.88
VARS2-207ENST00000476162 IL16Q14005 1332 aa20.53■□□□□ 0.88
VARS2-207ENST00000476162 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
VARS2-207ENST00000476162 RGS3P49796 1198 aa20.53■□□□□ 0.88
VARS2-207ENST00000476162 COG3Q96JB2 828 aa20.53■□□□□ 0.88
VARS2-207ENST00000476162 ZBTB47Q9UFB7 747 aaPredicted RBP20.53■□□□□ 0.88
VARS2-207ENST00000476162 MAP2P11137 1827 aaKnown RBP20.53■□□□□ 0.88
VARS2-207ENST00000476162 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
VARS2-207ENST00000476162 LRRC7Q96NW7 1537 aa20.51■□□□□ 0.87
VARS2-207ENST00000476162 HMOX1P09601 288 aa20.51■□□□□ 0.87
VARS2-207ENST00000476162 SLC26A8Q96RN1 970 aa20.51■□□□□ 0.87
VARS2-207ENST00000476162 ZNF692Q9BU19 519 aaPredicted RBP20.51■□□□□ 0.87
VARS2-207ENST00000476162 AATKQ6ZMQ8 1374 aa20.51■□□□□ 0.87
VARS2-207ENST00000476162 IL13P35225 146 aa20.5■□□□□ 0.87
VARS2-207ENST00000476162 NEFMP07197 916 aa20.5■□□□□ 0.87
VARS2-207ENST00000476162 EID1Q9Y6B2 187 aa20.5■□□□□ 0.87
VARS2-207ENST00000476162 RRS1Q15050 365 aaKnown RBP20.49■□□□□ 0.87
VARS2-207ENST00000476162 PHACTR3Q96KR7 559 aa20.49■□□□□ 0.87
VARS2-207ENST00000476162 MON2Q7Z3U7 1717 aa20.49■□□□□ 0.87
VARS2-207ENST00000476162 NUTM2FA1L443 756 aa20.49■□□□□ 0.87
VARS2-207ENST00000476162 ZKSCAN2Q63HK3 967 aa20.49■□□□□ 0.87
VARS2-207ENST00000476162 SMC4Q9NTJ3 1288 aa20.49■□□□□ 0.87
VARS2-207ENST00000476162 AAMPQ13685 434 aa20.48■□□□□ 0.87
VARS2-207ENST00000476162 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
VARS2-207ENST00000476162 SSH1Q8WYL5 1049 aa20.47■□□□□ 0.87
VARS2-207ENST00000476162 PCDHB15Q9Y5E8 787 aa20.47■□□□□ 0.87
VARS2-207ENST00000476162 CDK12Q9NYV4 1490 aaPredicted RBP20.47■□□□□ 0.87
VARS2-207ENST00000476162 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.47■□□□□ 0.87
VARS2-207ENST00000476162 C8orf34Q49A92 452 aa20.46■□□□□ 0.87
VARS2-207ENST00000476162 PTPRUQ92729 1446 aa20.46■□□□□ 0.87
VARS2-207ENST00000476162 DZIP1LQ8IYY4 767 aaKnown RBP20.46■□□□□ 0.87
VARS2-207ENST00000476162 AKAP12Q02952 1782 aa20.45■□□□□ 0.86
VARS2-207ENST00000476162 MVPQ14764 893 aaKnown RBP20.45■□□□□ 0.86
VARS2-207ENST00000476162 NFE2L2Q16236 605 aa20.45■□□□□ 0.86
VARS2-207ENST00000476162 FTSJ3Q8IY81 847 aaKnown RBP20.45■□□□□ 0.86
VARS2-207ENST00000476162 ACEP12821 1306 aa20.45■□□□□ 0.86
VARS2-207ENST00000476162 PMFBP1Q8TBY8 1022 aa20.45■□□□□ 0.86
VARS2-207ENST00000476162 C3P01024 1663 aa20.44■□□□□ 0.86
VARS2-207ENST00000476162 ITSN1Q15811 1721 aa20.44■□□□□ 0.86
VARS2-207ENST00000476162 AMOTL2Q9Y2J4 779 aa20.44■□□□□ 0.86
VARS2-207ENST00000476162 TTC21BQ7Z4L5 1316 aa20.43■□□□□ 0.86
VARS2-207ENST00000476162 PLEKHG3A1L390 1219 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms