RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	PSME1	Q06323	249 aa		13.97	□□□□□ -0.17
DMD-223	ENST00000475732	NGDN	Q8NEJ9	315 aa	Known RBP	13.97	□□□□□ -0.17
DMD-223	ENST00000475732	CABP1	Q9NZU7	370 aa		13.97	□□□□□ -0.17
DMD-223	ENST00000475732	POLR3A	O14802	1390 aa	Predicted RBP	13.96	□□□□□ -0.18
DMD-223	ENST00000475732	ACE	P12821	1306 aa		13.95	□□□□□ -0.18
DMD-223	ENST00000475732	SOS2	Q07890	1332 aa	Predicted RBP	13.95	□□□□□ -0.18
DMD-223	ENST00000475732	PXDN	Q92626	1479 aa		13.95	□□□□□ -0.18
DMD-223	ENST00000475732	KRT28	Q7Z3Y7	464 aa		13.95	□□□□□ -0.18
DMD-223	ENST00000475732	TMC1	Q8TDI8	760 aa		13.95	□□□□□ -0.18
DMD-223	ENST00000475732	LRRC59	Q96AG4	307 aa	Known RBP	13.95	□□□□□ -0.18
DMD-223	ENST00000475732	XPC	Q01831	940 aa	Predicted RBP	13.94	□□□□□ -0.18
DMD-223	ENST00000475732	NINL	Q9Y2I6	1382 aa		13.94	□□□□□ -0.18
DMD-223	ENST00000475732	AKAP12	Q02952	1782 aa		13.94	□□□□□ -0.18
DMD-223	ENST00000475732	ZNF692	Q9BU19	519 aa	Predicted RBP	13.92	□□□□□ -0.18
DMD-223	ENST00000475732	SLC12A5	Q9H2X9	1139 aa		13.92	□□□□□ -0.18
DMD-223	ENST00000475732	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.92	□□□□□ -0.18
DMD-223	ENST00000475732	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.91	□□□□□ -0.18
DMD-223	ENST00000475732	POLR3GL	Q9BT43	218 aa		13.91	□□□□□ -0.18
DMD-223	ENST00000475732	TERF2IP	Q9NYB0	399 aa		13.91	□□□□□ -0.18
DMD-223	ENST00000475732	SBNO1	A3KN83	1393 aa		13.91	□□□□□ -0.18
DMD-223	ENST00000475732	JCAD	Q9P266	1359 aa		13.91	□□□□□ -0.18
DMD-223	ENST00000475732	MYOM1	P52179	1685 aa		13.91	□□□□□ -0.18
DMD-223	ENST00000475732	SHPRH	Q149N8	1683 aa		13.91	□□□□□ -0.18
DMD-223	ENST00000475732	CPSF1	Q10570	1443 aa	Known RBP	13.9	□□□□□ -0.18
DMD-223	ENST00000475732	MON2	Q7Z3U7	1717 aa		13.9	□□□□□ -0.18
DMD-223	ENST00000475732	C11orf95	C9JLR9	678 aa	Predicted RBP	13.9	□□□□□ -0.18
DMD-223	ENST00000475732	BRD4	O60885	1362 aa	Predicted RBP	13.9	□□□□□ -0.18
DMD-223	ENST00000475732	USP6	P35125	1406 aa		13.9	□□□□□ -0.19
DMD-223	ENST00000475732	TNS3	Q68CZ2	1445 aa		13.9	□□□□□ -0.19
DMD-223	ENST00000475732	SPATA31A3	Q5VYP0	1347 aa		13.9	□□□□□ -0.19
DMD-223	ENST00000475732	CD163L1	Q9NR16	1453 aa		13.89	□□□□□ -0.19
DMD-223	ENST00000475732	KTN1	Q86UP2	1357 aa	Known RBP	13.89	□□□□□ -0.19
DMD-223	ENST00000475732	PAK3	O75914	559 aa	Predicted RBP	13.89	□□□□□ -0.19
DMD-223	ENST00000475732	CHRDL2	Q6WN34	429 aa		13.89	□□□□□ -0.19
DMD-223	ENST00000475732	ALS2	Q96Q42	1657 aa		13.88	□□□□□ -0.19
DMD-223	ENST00000475732	ATXN8OS	P0DMR3	200 aa		13.88	□□□□□ -0.19
DMD-223	ENST00000475732	KIF7	Q2M1P5	1343 aa		13.88	□□□□□ -0.19
DMD-223	ENST00000475732		A0A1W2PP64	1363 aa		13.87	□□□□□ -0.19
DMD-223	ENST00000475732	ARHGEF10	O15013	1369 aa		13.87	□□□□□ -0.19
DMD-223	ENST00000475732	PNPLA6	Q8IY17	1366 aa		13.87	□□□□□ -0.19
DMD-223	ENST00000475732	ANKRD36B	Q8N2N9	1353 aa		13.87	□□□□□ -0.19
DMD-223	ENST00000475732	LMOD2	Q6P5Q4	547 aa		13.87	□□□□□ -0.19
DMD-223	ENST00000475732	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.86	□□□□□ -0.19
DMD-223	ENST00000475732	AKT1S1	Q96B36	256 aa		13.86	□□□□□ -0.19
DMD-223	ENST00000475732	NRK	Q7Z2Y5	1582 aa		13.86	□□□□□ -0.19
DMD-223	ENST00000475732	SPATA31A6	Q5VVP1	1343 aa		13.86	□□□□□ -0.19
DMD-223	ENST00000475732	EDC4	Q6P2E9	1401 aa	Known RBP	13.85	□□□□□ -0.19
DMD-223	ENST00000475732	SSH2	Q76I76	1423 aa		13.85	□□□□□ -0.19
DMD-223	ENST00000475732	WASHC2A	Q641Q2	1341 aa		13.85	□□□□□ -0.19
DMD-223	ENST00000475732	TTC21B	Q7Z4L5	1316 aa		13.85	□□□□□ -0.19
DMD-223	ENST00000475732	TTC21A	Q8NDW8	1320 aa		13.85	□□□□□ -0.19
DMD-223	ENST00000475732	CCDC7	Q96M83	1385 aa		13.84	□□□□□ -0.19
DMD-223	ENST00000475732	ABTB2	Q8N961	1025 aa		13.84	□□□□□ -0.19
DMD-223	ENST00000475732	PIK3C2A	O00443	1686 aa		13.82	□□□□□ -0.2
DMD-223	ENST00000475732	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
DMD-223	ENST00000475732	MED1	Q15648	1581 aa	Predicted RBP	13.81	□□□□□ -0.2
DMD-223	ENST00000475732	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.81	□□□□□ -0.2
DMD-223	ENST00000475732	NUTM2E	B1AL46	878 aa	Predicted RBP	13.81	□□□□□ -0.2
DMD-223	ENST00000475732	NLRP6	P59044	892 aa		13.81	□□□□□ -0.2
DMD-223	ENST00000475732	NUTM2G	Q5VZR2	741 aa		13.81	□□□□□ -0.2
DMD-223	ENST00000475732	NLRP13	Q86W25	1043 aa		13.81	□□□□□ -0.2
DMD-223	ENST00000475732	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.81	□□□□□ -0.2
DMD-223	ENST00000475732	ABCA3	Q99758	1704 aa		13.81	□□□□□ -0.2
DMD-223	ENST00000475732	CRYBG1	Q9Y4K1	1723 aa		13.81	□□□□□ -0.2
DMD-223	ENST00000475732	PLEKHG5	O94827	1062 aa		13.8	□□□□□ -0.2
DMD-223	ENST00000475732	HAP1	P54257	671 aa	Predicted RBP	13.8	□□□□□ -0.2
DMD-223	ENST00000475732	PANK3	Q9H999	370 aa		13.8	□□□□□ -0.2
DMD-223	ENST00000475732	NSD3	Q9BZ95	1437 aa		13.8	□□□□□ -0.2
DMD-223	ENST00000475732	MARF1	Q9Y4F3	1742 aa	Known RBP	13.79	□□□□□ -0.2
DMD-223	ENST00000475732	KIF20B	Q96Q89	1820 aa		13.79	□□□□□ -0.2
DMD-223	ENST00000475732	CABLES1	Q8TDN4	633 aa		13.79	□□□□□ -0.2
DMD-223	ENST00000475732	CARD14	Q9BXL6	1004 aa		13.79	□□□□□ -0.2
DMD-223	ENST00000475732	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.79	□□□□□ -0.2
DMD-223	ENST00000475732	USP54	Q70EL1	1684 aa		13.79	□□□□□ -0.2
DMD-223	ENST00000475732	NME9	Q86XW9	330 aa		13.78	□□□□□ -0.2
DMD-223	ENST00000475732	LRP6	O75581	1613 aa		13.78	□□□□□ -0.2
DMD-223	ENST00000475732	USP19	O94966	1318 aa		13.77	□□□□□ -0.21
DMD-223	ENST00000475732	MEX3C	Q5U5Q3	659 aa	Known RBP	13.77	□□□□□ -0.21
DMD-223	ENST00000475732	USP31	Q70CQ4	1352 aa		13.77	□□□□□ -0.21
DMD-223	ENST00000475732	CGNL1	Q0VF96	1302 aa		13.76	□□□□□ -0.21
DMD-223	ENST00000475732	FYB1	O15117	783 aa		13.76	□□□□□ -0.21
DMD-223	ENST00000475732	SLIT3	O75094	1523 aa		13.75	□□□□□ -0.21
DMD-223	ENST00000475732	ADAMTS2	O95450	1211 aa		13.75	□□□□□ -0.21
DMD-223	ENST00000475732	COG3	Q96JB2	828 aa		13.75	□□□□□ -0.21
DMD-223	ENST00000475732	ZRANB1	Q9UGI0	708 aa		13.75	□□□□□ -0.21
DMD-223	ENST00000475732	KNSTRN	Q9Y448	316 aa		13.75	□□□□□ -0.21
DMD-223	ENST00000475732	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.74	□□□□□ -0.21
DMD-223	ENST00000475732	GC	P02774	474 aa		13.74	□□□□□ -0.21
DMD-223	ENST00000475732	KCNH5	Q8NCM2	988 aa		13.74	□□□□□ -0.21
DMD-223	ENST00000475732	GGNBP2	Q9H3C7	697 aa		13.74	□□□□□ -0.21
DMD-223	ENST00000475732	OVOS2	A0A0J9YW53	1432 aa		13.73	□□□□□ -0.21
DMD-223	ENST00000475732	OVOS2	Q6IE36	1432 aa		13.73	□□□□□ -0.21
DMD-223	ENST00000475732	ANKRD26	Q9UPS8	1709 aa		13.73	□□□□□ -0.21
DMD-223	ENST00000475732	C8orf37	Q96NL8	207 aa		13.73	□□□□□ -0.21
DMD-223	ENST00000475732	PER1	O15534	1290 aa	Predicted RBP	13.72	□□□□□ -0.21
DMD-223	ENST00000475732	NSD2	O96028	1365 aa		13.71	□□□□□ -0.21
DMD-223	ENST00000475732	COL14A1	Q05707	1796 aa	Known RBP	13.71	□□□□□ -0.21
DMD-223	ENST00000475732	SOX12	O15370	315 aa		13.71	□□□□□ -0.21
DMD-223	ENST00000475732	ZC3H6	P61129	1189 aa	Known RBP	13.71	□□□□□ -0.21
DMD-223	ENST00000475732	REM2	Q8IYK8	340 aa	Predicted RBP	13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms