RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 FER1L4A9Z1Z3 1794 aa18.52■□□□□ 0.56
GGA1-218ENST00000475445 CANXP27824 592 aaKnown RBP18.52■□□□□ 0.55
GGA1-218ENST00000475445 MYH16Q9H6N6 1097 aa18.52■□□□□ 0.55
GGA1-218ENST00000475445 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.55
GGA1-218ENST00000475445 RARSP54136 660 aaKnown RBP18.51■□□□□ 0.55
GGA1-218ENST00000475445 SKAP1Q86WV1 359 aa18.51■□□□□ 0.55
GGA1-218ENST00000475445 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
GGA1-218ENST00000475445 DDRGK1Q96HY6 314 aa18.5■□□□□ 0.55
GGA1-218ENST00000475445 FAM161AQ3B820 660 aa18.5■□□□□ 0.55
GGA1-218ENST00000475445 ZMYND15Q9H091 742 aa18.5■□□□□ 0.55
GGA1-218ENST00000475445 VIRMAQ69YN4 1812 aaKnown RBP18.49■□□□□ 0.55
GGA1-218ENST00000475445 RIMS1Q86UR5 1692 aaKnown RBP18.49■□□□□ 0.55
GGA1-218ENST00000475445 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
GGA1-218ENST00000475445 FYB1O15117 783 aa18.49■□□□□ 0.55
GGA1-218ENST00000475445 CLUAP1Q96AJ1 413 aa18.49■□□□□ 0.55
GGA1-218ENST00000475445 ATP7BP35670 1465 aa18.48■□□□□ 0.55
GGA1-218ENST00000475445 RSPH6AQ9H0K4 717 aa18.48■□□□□ 0.55
GGA1-218ENST00000475445 GGNBP2Q9H3C7 697 aa18.48■□□□□ 0.55
GGA1-218ENST00000475445 CT47B1P0C2W7 299 aaPredicted RBP18.48■□□□□ 0.55
GGA1-218ENST00000475445 CDK19Q9BWU1 502 aa18.48■□□□□ 0.55
GGA1-218ENST00000475445 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
GGA1-218ENST00000475445 PLEKHF1Q96S99 279 aa18.46■□□□□ 0.55
GGA1-218ENST00000475445 PNPLA6Q8IY17 1366 aa18.46■□□□□ 0.55
GGA1-218ENST00000475445 PANK1Q8TE04 598 aa18.45■□□□□ 0.54
GGA1-218ENST00000475445 C8orf34Q49A92 452 aa18.45■□□□□ 0.54
GGA1-218ENST00000475445 COG6Q9Y2V7 657 aa18.45■□□□□ 0.54
GGA1-218ENST00000475445 NRXN3Q9Y4C0 1643 aa18.45■□□□□ 0.54
GGA1-218ENST00000475445 ZMYM3Q14202 1370 aa18.44■□□□□ 0.54
GGA1-218ENST00000475445 FRAT1Q92837 279 aaPredicted RBP18.44■□□□□ 0.54
GGA1-218ENST00000475445 PNNQ9H307 717 aaKnown RBP18.44■□□□□ 0.54
GGA1-218ENST00000475445 KNDC1Q76NI1 1749 aa18.44■□□□□ 0.54
GGA1-218ENST00000475445 MAPK8IP3Q9UPT6 1336 aa18.43■□□□□ 0.54
GGA1-218ENST00000475445 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
GGA1-218ENST00000475445 IL16Q14005 1332 aa18.43■□□□□ 0.54
GGA1-218ENST00000475445 IGHDP01880 384 aa18.43■□□□□ 0.54
GGA1-218ENST00000475445 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
GGA1-218ENST00000475445 TMPOP42166 694 aaKnown RBP18.42■□□□□ 0.54
GGA1-218ENST00000475445 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
GGA1-218ENST00000475445 CABP1Q9NZU7 370 aa18.42■□□□□ 0.54
GGA1-218ENST00000475445 DIAPH1O60610 1272 aaKnown RBP18.41■□□□□ 0.54
GGA1-218ENST00000475445 RGS3P49796 1198 aa18.41■□□□□ 0.54
GGA1-218ENST00000475445 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.41■□□□□ 0.54
GGA1-218ENST00000475445 VSIG10Q8N0Z9 540 aa18.38■□□□□ 0.53
GGA1-218ENST00000475445 TRIM35Q9UPQ4 493 aa18.38■□□□□ 0.53
GGA1-218ENST00000475445 RLBP1P12271 317 aa18.37■□□□□ 0.53
GGA1-218ENST00000475445 ZKSCAN2Q63HK3 967 aa18.37■□□□□ 0.53
GGA1-218ENST00000475445 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
GGA1-218ENST00000475445 LRRC7Q96NW7 1537 aa18.37■□□□□ 0.53
GGA1-218ENST00000475445 CPSF1Q10570 1443 aaKnown RBP18.37■□□□□ 0.53
GGA1-218ENST00000475445 EDC4Q6P2E9 1401 aaKnown RBP18.37■□□□□ 0.53
GGA1-218ENST00000475445 TECPR2O15040 1411 aa18.36■□□□□ 0.53
GGA1-218ENST00000475445 FAM135BQ49AJ0 1406 aa18.36■□□□□ 0.53
GGA1-218ENST00000475445 PPM1GO15355 546 aaPredicted RBP18.36■□□□□ 0.53
GGA1-218ENST00000475445 WAPLQ7Z5K2 1190 aa18.36■□□□□ 0.53
GGA1-218ENST00000475445 C3P01024 1663 aa18.36■□□□□ 0.53
GGA1-218ENST00000475445 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
GGA1-218ENST00000475445 CPS1P31327 1500 aa18.36■□□□□ 0.53
GGA1-218ENST00000475445 FCHSD2O94868 740 aa18.36■□□□□ 0.53
GGA1-218ENST00000475445 PLPPR3Q6T4P5 718 aa18.36■□□□□ 0.53
GGA1-218ENST00000475445 SIRT1Q96EB6 747 aa18.36■□□□□ 0.53
GGA1-218ENST00000475445 BCL2L13Q9BXK5 485 aa18.35■□□□□ 0.53
GGA1-218ENST00000475445 MVPQ14764 893 aaKnown RBP18.35■□□□□ 0.53
GGA1-218ENST00000475445 CEBPAP49715 358 aaPredicted RBP18.34■□□□□ 0.53
GGA1-218ENST00000475445 HDGFP51858 240 aaKnown RBP18.34■□□□□ 0.53
GGA1-218ENST00000475445 WASLO00401 505 aaPredicted RBP18.34■□□□□ 0.53
GGA1-218ENST00000475445 EXOSC9Q06265 439 aaKnown RBP18.34■□□□□ 0.53
GGA1-218ENST00000475445 TSR2Q969E8 191 aaKnown RBP18.34■□□□□ 0.53
GGA1-218ENST00000475445 AKAP12Q02952 1782 aa18.33■□□□□ 0.53
GGA1-218ENST00000475445 RIPK4P57078 832 aa18.33■□□□□ 0.53
GGA1-218ENST00000475445 PPIP5K1Q6PFW1 1433 aa18.33■□□□□ 0.53
GGA1-218ENST00000475445 AEBP2Q6ZN18 517 aaPredicted RBP18.33■□□□□ 0.53
GGA1-218ENST00000475445 DZIP1LQ8IYY4 767 aaKnown RBP18.33■□□□□ 0.53
GGA1-218ENST00000475445 TNRQ92752 1358 aa18.33■□□□□ 0.53
GGA1-218ENST00000475445 USP35Q9P2H5 1018 aa18.33■□□□□ 0.53
GGA1-218ENST00000475445 TNNQ9UQP3 1299 aa18.33■□□□□ 0.53
GGA1-218ENST00000475445 RWDD1Q9H446 243 aaPredicted RBP18.33■□□□□ 0.52
GGA1-218ENST00000475445 PCDHB15Q9Y5E8 787 aa18.33■□□□□ 0.52
GGA1-218ENST00000475445 ITSN1Q15811 1721 aa18.32■□□□□ 0.52
GGA1-218ENST00000475445 METP08581 1390 aa18.32■□□□□ 0.52
GGA1-218ENST00000475445 CDK12Q9NYV4 1490 aaPredicted RBP18.32■□□□□ 0.52
GGA1-218ENST00000475445 SMC4Q9NTJ3 1288 aa18.32■□□□□ 0.52
GGA1-218ENST00000475445 POLKQ9UBT6 870 aa18.32■□□□□ 0.52
GGA1-218ENST00000475445 UBR1Q8IWV7 1749 aa18.31■□□□□ 0.52
GGA1-218ENST00000475445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.31■□□□□ 0.52
GGA1-218ENST00000475445 FTSJ3Q8IY81 847 aaKnown RBP18.31■□□□□ 0.52
GGA1-218ENST00000475445 AATKQ6ZMQ8 1374 aa18.31■□□□□ 0.52
GGA1-218ENST00000475445 NEFMP07197 916 aa18.3■□□□□ 0.52
GGA1-218ENST00000475445 SSH1Q8WYL5 1049 aa18.28■□□□□ 0.52
GGA1-218ENST00000475445 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
GGA1-218ENST00000475445 KIF16BQ96L93 1317 aa18.27■□□□□ 0.52
GGA1-218ENST00000475445 ATF7IPQ6VMQ6 1270 aa18.27■□□□□ 0.52
GGA1-218ENST00000475445 ZNF428Q96B54 188 aa18.27■□□□□ 0.52
GGA1-218ENST00000475445 DDX19BQ9UMR2 479 aa18.27■□□□□ 0.52
GGA1-218ENST00000475445 PRKAR2BP31323 418 aa18.27■□□□□ 0.51
GGA1-218ENST00000475445 ALDH1L2Q3SY69 923 aa18.27■□□□□ 0.51
GGA1-218ENST00000475445 TRIM27P14373 513 aa18.26■□□□□ 0.51
GGA1-218ENST00000475445 TMEM2Q9UHN6 1383 aa18.26■□□□□ 0.51
GGA1-218ENST00000475445 CALD1Q05682 793 aaKnown RBP18.26■□□□□ 0.51
GGA1-218ENST00000475445 NUDT16Q96DE0 195 aaKnown RBP18.26■□□□□ 0.51
GGA1-218ENST00000475445 PDZRN3Q9UPQ7 1066 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms