RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 EVC2Q86UK5 1308 aa17.03■□□□□ 0.32
ARHGEF39-203ENST00000475323 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
ARHGEF39-203ENST00000475323 STK26Q9P289 416 aa17.03■□□□□ 0.32
ARHGEF39-203ENST00000475323 NPATQ14207 1427 aa17.03■□□□□ 0.32
ARHGEF39-203ENST00000475323 ABCA9Q8IUA7 1624 aa17.03■□□□□ 0.32
ARHGEF39-203ENST00000475323 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
ARHGEF39-203ENST00000475323 ADGRB2O60241 1585 aa17.02■□□□□ 0.32
ARHGEF39-203ENST00000475323 TULP4Q9NRJ4 1543 aa17.02■□□□□ 0.32
ARHGEF39-203ENST00000475323 RIPK4P57078 832 aa17.02■□□□□ 0.32
ARHGEF39-203ENST00000475323 PPLO60437 1756 aa17.01■□□□□ 0.31
ARHGEF39-203ENST00000475323 USP32Q8NFA0 1604 aa17■□□□□ 0.31
ARHGEF39-203ENST00000475323 KIDINS220Q9ULH0 1771 aa17■□□□□ 0.31
ARHGEF39-203ENST00000475323 A0A1W2PP64 1363 aa17■□□□□ 0.31
ARHGEF39-203ENST00000475323 ASXL2Q76L83 1435 aa17■□□□□ 0.31
ARHGEF39-203ENST00000475323 CT47B1P0C2W7 299 aaPredicted RBP17■□□□□ 0.31
ARHGEF39-203ENST00000475323 FBLN1P23142 703 aa17■□□□□ 0.31
ARHGEF39-203ENST00000475323 C1orf115Q9H7X2 142 aa17■□□□□ 0.31
ARHGEF39-203ENST00000475323 CD2BP2O95400 341 aaKnown RBP16.99■□□□□ 0.31
ARHGEF39-203ENST00000475323 SRPK2P78362 688 aaKnown RBP16.99■□□□□ 0.31
ARHGEF39-203ENST00000475323 NUCB1Q02818 461 aa16.99■□□□□ 0.31
ARHGEF39-203ENST00000475323 TNPO1Q92973 898 aaKnown RBP16.99■□□□□ 0.31
ARHGEF39-203ENST00000475323 NAP1L5Q96NT1 182 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF39-203ENST00000475323 DDIT3P35638 169 aa16.99■□□□□ 0.31
ARHGEF39-203ENST00000475323 GRPEL1Q9HAV7 217 aa16.99■□□□□ 0.31
ARHGEF39-203ENST00000475323 GAS2L3Q86XJ1 694 aa16.98■□□□□ 0.31
ARHGEF39-203ENST00000475323 GLI2P10070 1586 aa16.97■□□□□ 0.31
ARHGEF39-203ENST00000475323 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
ARHGEF39-203ENST00000475323 MRE11P49959 708 aa16.97■□□□□ 0.31
ARHGEF39-203ENST00000475323 CHD1LQ86WJ1 897 aa16.97■□□□□ 0.31
ARHGEF39-203ENST00000475323 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
ARHGEF39-203ENST00000475323 PNNQ9H307 717 aaKnown RBP16.97■□□□□ 0.31
ARHGEF39-203ENST00000475323 FYB1O15117 783 aa16.97■□□□□ 0.31
ARHGEF39-203ENST00000475323 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
ARHGEF39-203ENST00000475323 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.31
ARHGEF39-203ENST00000475323 KIF2CQ99661 725 aa16.96■□□□□ 0.31
ARHGEF39-203ENST00000475323 NSD2O96028 1365 aa16.96■□□□□ 0.31
ARHGEF39-203ENST00000475323 ERBB4Q15303 1308 aa16.96■□□□□ 0.31
ARHGEF39-203ENST00000475323 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
ARHGEF39-203ENST00000475323 ANKRD45Q5TZF3 282 aa16.96■□□□□ 0.31
ARHGEF39-203ENST00000475323 DDX11L8A8MPP1 907 aa16.95■□□□□ 0.3
ARHGEF39-203ENST00000475323 CLCN1P35523 988 aa16.95■□□□□ 0.3
ARHGEF39-203ENST00000475323 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
ARHGEF39-203ENST00000475323 NCOA3Q9Y6Q9 1424 aa16.95■□□□□ 0.3
ARHGEF39-203ENST00000475323 MINK1Q8N4C8 1332 aaPredicted RBP16.95■□□□□ 0.3
ARHGEF39-203ENST00000475323 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
ARHGEF39-203ENST00000475323 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
ARHGEF39-203ENST00000475323 ARHGEF28Q8N1W1 1705 aaKnown RBP16.94■□□□□ 0.3
ARHGEF39-203ENST00000475323 ABCC11Q96J66 1382 aa16.94■□□□□ 0.3
ARHGEF39-203ENST00000475323 ELL2O00472 640 aaPredicted RBP16.94■□□□□ 0.3
ARHGEF39-203ENST00000475323 KIF16BQ96L93 1317 aa16.93■□□□□ 0.3
ARHGEF39-203ENST00000475323 IPO8O15397 1037 aaKnown RBP16.93■□□□□ 0.3
ARHGEF39-203ENST00000475323 SNX21Q969T3 373 aa16.93■□□□□ 0.3
ARHGEF39-203ENST00000475323 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
ARHGEF39-203ENST00000475323 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
ARHGEF39-203ENST00000475323 RPGRIP1LQ68CZ1 1315 aa16.92■□□□□ 0.3
ARHGEF39-203ENST00000475323 VGFO15240 615 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF39-203ENST00000475323 HSP90AA1P07900 732 aaKnown RBP16.91■□□□□ 0.3
ARHGEF39-203ENST00000475323 TSPYL6Q8N831 410 aa16.91■□□□□ 0.3
ARHGEF39-203ENST00000475323 IL16Q14005 1332 aa16.91■□□□□ 0.3
ARHGEF39-203ENST00000475323 PPIP5K1Q6PFW1 1433 aa16.91■□□□□ 0.3
ARHGEF39-203ENST00000475323 RAB3GAP1Q15042 981 aa16.91■□□□□ 0.3
ARHGEF39-203ENST00000475323 BMP2KLQ5H9B9 411 aa16.91■□□□□ 0.3
ARHGEF39-203ENST00000475323 TBC1D9Q6ZT07 1266 aa16.91■□□□□ 0.3
ARHGEF39-203ENST00000475323 ZBTB7BO15156 539 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF39-203ENST00000475323 PRKAR2BP31323 418 aa16.9■□□□□ 0.3
ARHGEF39-203ENST00000475323 PUS7Q96PZ0 661 aaKnown RBP16.9■□□□□ 0.3
ARHGEF39-203ENST00000475323 SIRT2Q8IXJ6 389 aa16.9■□□□□ 0.3
ARHGEF39-203ENST00000475323 ESPNB1AK53 854 aa16.89■□□□□ 0.29
ARHGEF39-203ENST00000475323 HMOX1P09601 288 aa16.89■□□□□ 0.29
ARHGEF39-203ENST00000475323 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
ARHGEF39-203ENST00000475323 SSFA2P28290 1259 aa16.89■□□□□ 0.29
ARHGEF39-203ENST00000475323 PRAM1Q96QH2 718 aa16.89■□□□□ 0.29
ARHGEF39-203ENST00000475323 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
ARHGEF39-203ENST00000475323 FRMPD1Q5SYB0 1578 aa16.88■□□□□ 0.29
ARHGEF39-203ENST00000475323 IDI1Q13907 227 aa16.88■□□□□ 0.29
ARHGEF39-203ENST00000475323 ALDH1L2Q3SY69 923 aa16.88■□□□□ 0.29
ARHGEF39-203ENST00000475323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.88■□□□□ 0.29
ARHGEF39-203ENST00000475323 SIGLEC1Q9BZZ2 1709 aa16.88■□□□□ 0.29
ARHGEF39-203ENST00000475323 AK9Q5TCS8 1911 aa16.87■□□□□ 0.29
ARHGEF39-203ENST00000475323 GBP4Q96PP9 640 aa16.87■□□□□ 0.29
ARHGEF39-203ENST00000475323 TERF2IPQ9NYB0 399 aa16.87■□□□□ 0.29
ARHGEF39-203ENST00000475323 ATAD2Q6PL18 1390 aa16.86■□□□□ 0.29
ARHGEF39-203ENST00000475323 VAMP4O75379 141 aa16.86■□□□□ 0.29
ARHGEF39-203ENST00000475323 CD163L1Q9NR16 1453 aa16.86■□□□□ 0.29
ARHGEF39-203ENST00000475323 CABP1Q9NZU7 370 aa16.86■□□□□ 0.29
ARHGEF39-203ENST00000475323 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
ARHGEF39-203ENST00000475323 K7ELQ4 463 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF39-203ENST00000475323 MRPL50Q8N5N7 158 aaKnown RBP16.85■□□□□ 0.29
ARHGEF39-203ENST00000475323 CIZ1Q9ULV3 898 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF39-203ENST00000475323 CFAP74Q9C0B2 1584 aa16.84■□□□□ 0.29
ARHGEF39-203ENST00000475323 ABCC3O15438 1527 aa16.84■□□□□ 0.29
ARHGEF39-203ENST00000475323 TRIM44Q96DX7 344 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF39-203ENST00000475323 LRRC7Q96NW7 1537 aa16.84■□□□□ 0.29
ARHGEF39-203ENST00000475323 FCHSD2O94868 740 aa16.83■□□□□ 0.29
ARHGEF39-203ENST00000475323 RAPGEF3O95398 923 aa16.83■□□□□ 0.29
ARHGEF39-203ENST00000475323 GCC1Q96CN9 775 aa16.83■□□□□ 0.28
ARHGEF39-203ENST00000475323 POLKQ9UBT6 870 aa16.83■□□□□ 0.28
ARHGEF39-203ENST00000475323 MED14O60244 1454 aa16.83■□□□□ 0.28
ARHGEF39-203ENST00000475323 PNPLA6Q8IY17 1366 aa16.82■□□□□ 0.28
ARHGEF39-203ENST00000475323 GSPT1P15170 499 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms