RNA–Protein interactions for RNA: ENST00000475163.5

TSPAN1-206, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-206ENST00000475163 PXDNQ92626 1479 aa14.08□□□□□ -0.16
TSPAN1-206ENST00000475163 CD163L1Q9NR16 1453 aa14.08□□□□□ -0.16
TSPAN1-206ENST00000475163 BRD4O60885 1362 aaPredicted RBP14.08□□□□□ -0.16
TSPAN1-206ENST00000475163 USP6P35125 1406 aa14.07□□□□□ -0.16
TSPAN1-206ENST00000475163 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
TSPAN1-206ENST00000475163 LRRC59Q96AG4 307 aaKnown RBP14.07□□□□□ -0.16
TSPAN1-206ENST00000475163 PANK3Q9H999 370 aa14.07□□□□□ -0.16
TSPAN1-206ENST00000475163 SBNO1A3KN83 1393 aa14.07□□□□□ -0.16
TSPAN1-206ENST00000475163 COL16A1Q07092 1604 aaPredicted RBP14.05□□□□□ -0.16
TSPAN1-206ENST00000475163 MON2Q7Z3U7 1717 aa14.05□□□□□ -0.16
TSPAN1-206ENST00000475163 LMOD2Q6P5Q4 547 aa14.05□□□□□ -0.16
TSPAN1-206ENST00000475163 SPATA31A3Q5VYP0 1347 aa14.05□□□□□ -0.16
TSPAN1-206ENST00000475163 TTC21BQ7Z4L5 1316 aa14.05□□□□□ -0.16
TSPAN1-206ENST00000475163 TTC21AQ8NDW8 1320 aa14.04□□□□□ -0.16
TSPAN1-206ENST00000475163 TNS3Q68CZ2 1445 aa14.04□□□□□ -0.16
TSPAN1-206ENST00000475163 EDC4Q6P2E9 1401 aaKnown RBP14.04□□□□□ -0.16
TSPAN1-206ENST00000475163 SSH2Q76I76 1423 aa14.04□□□□□ -0.16
TSPAN1-206ENST00000475163 TRPM3Q9HCF6 1732 aaPredicted RBP14.04□□□□□ -0.16
TSPAN1-206ENST00000475163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.03□□□□□ -0.16
TSPAN1-206ENST00000475163 ABTB2Q8N961 1025 aa14.03□□□□□ -0.16
TSPAN1-206ENST00000475163 CARD14Q9BXL6 1004 aa14.03□□□□□ -0.16
TSPAN1-206ENST00000475163 NSD3Q9BZ95 1437 aa14.02□□□□□ -0.16
TSPAN1-206ENST00000475163 ARHGEF10O15013 1369 aa14.02□□□□□ -0.17
TSPAN1-206ENST00000475163 NRKQ7Z2Y5 1582 aa14.01□□□□□ -0.17
TSPAN1-206ENST00000475163 JCADQ9P266 1359 aa14.01□□□□□ -0.17
TSPAN1-206ENST00000475163 DDX10Q13206 875 aaKnown RBP14.01□□□□□ -0.17
TSPAN1-206ENST00000475163 KNSTRNQ9Y448 316 aa14.01□□□□□ -0.17
TSPAN1-206ENST00000475163 ALS2Q96Q42 1657 aa14□□□□□ -0.17
TSPAN1-206ENST00000475163 PNPLA6Q8IY17 1366 aa13.99□□□□□ -0.17
TSPAN1-206ENST00000475163 NLRP6P59044 892 aa13.99□□□□□ -0.17
TSPAN1-206ENST00000475163 NUTM2GQ5VZR2 741 aa13.99□□□□□ -0.17
TSPAN1-206ENST00000475163 NLRP13Q86W25 1043 aa13.99□□□□□ -0.17
TSPAN1-206ENST00000475163 NME9Q86XW9 330 aa13.99□□□□□ -0.17
TSPAN1-206ENST00000475163 CGNL1Q0VF96 1302 aa13.98□□□□□ -0.17
TSPAN1-206ENST00000475163 PLEKHG5O94827 1062 aa13.98□□□□□ -0.17
TSPAN1-206ENST00000475163 FYB1O15117 783 aa13.97□□□□□ -0.17
TSPAN1-206ENST00000475163 PER1O15534 1290 aaPredicted RBP13.97□□□□□ -0.17
TSPAN1-206ENST00000475163 PIK3C2AO00443 1686 aa13.97□□□□□ -0.17
TSPAN1-206ENST00000475163 SHPRHQ149N8 1683 aa13.97□□□□□ -0.17
TSPAN1-206ENST00000475163 USP31Q70CQ4 1352 aa13.96□□□□□ -0.17
TSPAN1-206ENST00000475163 HAP1P54257 671 aaPredicted RBP13.96□□□□□ -0.17
TSPAN1-206ENST00000475163 COG3Q96JB2 828 aa13.96□□□□□ -0.17
TSPAN1-206ENST00000475163 GGNBP2Q9H3C7 697 aa13.96□□□□□ -0.17
TSPAN1-206ENST00000475163 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
TSPAN1-206ENST00000475163 COL22A1Q8NFW1 1626 aaPredicted RBP13.96□□□□□ -0.17
TSPAN1-206ENST00000475163 SPATA31A6Q5VVP1 1343 aa13.95□□□□□ -0.18
TSPAN1-206ENST00000475163 KIF20BQ96Q89 1820 aa13.95□□□□□ -0.18
TSPAN1-206ENST00000475163 CABLES1Q8TDN4 633 aa13.95□□□□□ -0.18
TSPAN1-206ENST00000475163 NUTM2BA6NNL0 878 aaPredicted RBP13.94□□□□□ -0.18
TSPAN1-206ENST00000475163 NUTM2EB1AL46 878 aaPredicted RBP13.94□□□□□ -0.18
TSPAN1-206ENST00000475163 NUTM2AQ8IVF1 878 aaPredicted RBP13.94□□□□□ -0.18
TSPAN1-206ENST00000475163 NSD2O96028 1365 aa13.94□□□□□ -0.18
TSPAN1-206ENST00000475163 USP19O94966 1318 aa13.93□□□□□ -0.18
TSPAN1-206ENST00000475163 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
TSPAN1-206ENST00000475163 KCNH5Q8NCM2 988 aa13.93□□□□□ -0.18
TSPAN1-206ENST00000475163 USP54Q70EL1 1684 aa13.92□□□□□ -0.18
TSPAN1-206ENST00000475163 OVOS2A0A0J9YW53 1432 aa13.92□□□□□ -0.18
TSPAN1-206ENST00000475163 OVOS2Q6IE36 1432 aa13.92□□□□□ -0.18
TSPAN1-206ENST00000475163 GCP02774 474 aa13.92□□□□□ -0.18
TSPAN1-206ENST00000475163 SLIT3O75094 1523 aa13.91□□□□□ -0.18
TSPAN1-206ENST00000475163 SOX12O15370 315 aa13.91□□□□□ -0.18
TSPAN1-206ENST00000475163 CNGB1Q14028 1251 aaPredicted RBP13.91□□□□□ -0.18
TSPAN1-206ENST00000475163 CC2D1BQ5T0F9 858 aaKnown RBP13.91□□□□□ -0.18
TSPAN1-206ENST00000475163 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
TSPAN1-206ENST00000475163 RGS17Q9UGC6 210 aaPredicted RBP13.91□□□□□ -0.18
TSPAN1-206ENST00000475163 NPC1L1Q9UHC9 1359 aa13.91□□□□□ -0.18
TSPAN1-206ENST00000475163 LRP6O75581 1613 aa13.9□□□□□ -0.18
TSPAN1-206ENST00000475163 PHRF1Q9P1Y6 1649 aaKnown RBP13.9□□□□□ -0.18
TSPAN1-206ENST00000475163 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
TSPAN1-206ENST00000475163 ABCA3Q99758 1704 aa13.9□□□□□ -0.18
TSPAN1-206ENST00000475163 ANKRD26Q9UPS8 1709 aa13.9□□□□□ -0.18
TSPAN1-206ENST00000475163 CRYBG1Q9Y4K1 1723 aa13.9□□□□□ -0.18
TSPAN1-206ENST00000475163 ADAMTS2O95450 1211 aa13.89□□□□□ -0.19
TSPAN1-206ENST00000475163 ZC3H6P61129 1189 aaKnown RBP13.88□□□□□ -0.19
TSPAN1-206ENST00000475163 MEX3CQ5U5Q3 659 aaKnown RBP13.88□□□□□ -0.19
TSPAN1-206ENST00000475163 ZBTB7CA1YPR0 619 aa13.87□□□□□ -0.19
TSPAN1-206ENST00000475163 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
TSPAN1-206ENST00000475163 POTEAQ6S8J7 498 aa13.87□□□□□ -0.19
TSPAN1-206ENST00000475163 POTEDQ86YR6 584 aa13.86□□□□□ -0.19
TSPAN1-206ENST00000475163 PRDM11Q9NQV5 511 aa13.86□□□□□ -0.19
TSPAN1-206ENST00000475163 NFAT5O94916 1531 aa13.85□□□□□ -0.19
TSPAN1-206ENST00000475163 CPDO75976 1380 aa13.85□□□□□ -0.19
TSPAN1-206ENST00000475163 KIAA0232Q92628 1395 aa13.85□□□□□ -0.19
TSPAN1-206ENST00000475163 FBLN1P23142 703 aa13.85□□□□□ -0.19
TSPAN1-206ENST00000475163 ARHGEF25Q86VW2 580 aa13.85□□□□□ -0.19
TSPAN1-206ENST00000475163 AATKQ6ZMQ8 1374 aa13.84□□□□□ -0.19
TSPAN1-206ENST00000475163 FAM83GA6ND36 823 aa13.84□□□□□ -0.19
TSPAN1-206ENST00000475163 RRS1Q15050 365 aaKnown RBP13.84□□□□□ -0.19
TSPAN1-206ENST00000475163 NGLY1Q96IV0 654 aa13.84□□□□□ -0.19
TSPAN1-206ENST00000475163 C8orf37Q96NL8 207 aa13.84□□□□□ -0.19
TSPAN1-206ENST00000475163 AMPHP49418 695 aa13.83□□□□□ -0.2
TSPAN1-206ENST00000475163 RALBP1Q15311 655 aa13.83□□□□□ -0.2
TSPAN1-206ENST00000475163 CHRNA2Q15822 529 aa13.83□□□□□ -0.2
TSPAN1-206ENST00000475163 MAP3K19Q56UN5 1328 aa13.83□□□□□ -0.2
TSPAN1-206ENST00000475163 PARD3Q8TEW0 1356 aa13.82□□□□□ -0.2
TSPAN1-206ENST00000475163 LTN1O94822 1766 aa13.81□□□□□ -0.2
TSPAN1-206ENST00000475163 COL14A1Q05707 1796 aaKnown RBP13.81□□□□□ -0.2
TSPAN1-206ENST00000475163 PPM1GO15355 546 aaPredicted RBP13.81□□□□□ -0.2
TSPAN1-206ENST00000475163 POLKQ9UBT6 870 aa13.81□□□□□ -0.2
TSPAN1-206ENST00000475163 EMILIN1Q9Y6C2 1016 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms