RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 TMC1Q8TDI8 760 aa11.21□□□□□ -0.61
HPS1-210ENST00000474873 SLC12A5Q9H2X9 1139 aa11.21□□□□□ -0.61
HPS1-210ENST00000474873 NINLQ9Y2I6 1382 aa11.2□□□□□ -0.62
HPS1-210ENST00000474873 TERF2IPQ9NYB0 399 aa11.2□□□□□ -0.62
HPS1-210ENST00000474873 COL22A1Q8NFW1 1626 aaPredicted RBP11.2□□□□□ -0.62
HPS1-210ENST00000474873 USP6P35125 1406 aa11.19□□□□□ -0.62
HPS1-210ENST00000474873 CPSF1Q10570 1443 aaKnown RBP11.19□□□□□ -0.62
HPS1-210ENST00000474873 TRPM3Q9HCF6 1732 aaPredicted RBP11.19□□□□□ -0.62
HPS1-210ENST00000474873 MEX3CQ5U5Q3 659 aaKnown RBP11.19□□□□□ -0.62
HPS1-210ENST00000474873 LRP6O75581 1613 aa11.19□□□□□ -0.62
HPS1-210ENST00000474873 ADAMTS2O95450 1211 aa11.18□□□□□ -0.62
HPS1-210ENST00000474873 HDGFL2Q7Z4V5 671 aaPredicted RBP11.18□□□□□ -0.62
HPS1-210ENST00000474873 ABTB2Q8N961 1025 aa11.18□□□□□ -0.62
HPS1-210ENST00000474873 SSH2Q76I76 1423 aa11.18□□□□□ -0.62
HPS1-210ENST00000474873 KTN1Q86UP2 1357 aaKnown RBP11.17□□□□□ -0.62
HPS1-210ENST00000474873 CABLES1Q8TDN4 633 aa11.17□□□□□ -0.62
HPS1-210ENST00000474873 CD163L1Q9NR16 1453 aa11.17□□□□□ -0.62
HPS1-210ENST00000474873 ALS2Q96Q42 1657 aa11.17□□□□□ -0.62
HPS1-210ENST00000474873 TTC21BQ7Z4L5 1316 aa11.16□□□□□ -0.62
HPS1-210ENST00000474873 TTC21AQ8NDW8 1320 aa11.16□□□□□ -0.62
HPS1-210ENST00000474873 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
HPS1-210ENST00000474873 NLRP13Q86W25 1043 aa11.16□□□□□ -0.62
HPS1-210ENST00000474873 NGLY1Q96IV0 654 aa11.16□□□□□ -0.62
HPS1-210ENST00000474873 NUTM2GQ5VZR2 741 aa11.15□□□□□ -0.62
HPS1-210ENST00000474873 C8orf37Q96NL8 207 aa11.15□□□□□ -0.62
HPS1-210ENST00000474873 A0A1W2PP64 1363 aa11.15□□□□□ -0.63
HPS1-210ENST00000474873 AKAP12Q02952 1782 aa11.14□□□□□ -0.63
HPS1-210ENST00000474873 PLEKHG5O94827 1062 aa11.14□□□□□ -0.63
HPS1-210ENST00000474873 ZEB1P37275 1124 aaPredicted RBP11.14□□□□□ -0.63
HPS1-210ENST00000474873 NLRP6P59044 892 aa11.14□□□□□ -0.63
HPS1-210ENST00000474873 ZNF772Q68DY9 489 aaPredicted RBP11.14□□□□□ -0.63
HPS1-210ENST00000474873 FNBP4Q8N3X1 1017 aaPredicted RBP11.14□□□□□ -0.63
HPS1-210ENST00000474873 EDC4Q6P2E9 1401 aaKnown RBP11.14□□□□□ -0.63
HPS1-210ENST00000474873 ANKRD36BQ8N2N9 1353 aa11.14□□□□□ -0.63
HPS1-210ENST00000474873 USP19O94966 1318 aa11.13□□□□□ -0.63
HPS1-210ENST00000474873 AFF2P51816 1311 aa11.13□□□□□ -0.63
HPS1-210ENST00000474873 C11orf95C9JLR9 678 aaPredicted RBP11.13□□□□□ -0.63
HPS1-210ENST00000474873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.13□□□□□ -0.63
HPS1-210ENST00000474873 GCP02774 474 aa11.12□□□□□ -0.63
HPS1-210ENST00000474873 MON2Q7Z3U7 1717 aa11.12□□□□□ -0.63
HPS1-210ENST00000474873 FAM83GA6ND36 823 aa11.11□□□□□ -0.63
HPS1-210ENST00000474873 POLR3GLQ9BT43 218 aa11.11□□□□□ -0.63
HPS1-210ENST00000474873 USP31Q70CQ4 1352 aa11.11□□□□□ -0.63
HPS1-210ENST00000474873 NME9Q86XW9 330 aa11.1□□□□□ -0.63
HPS1-210ENST00000474873 KCNH5Q8NCM2 988 aa11.1□□□□□ -0.63
HPS1-210ENST00000474873 PRDM11Q9NQV5 511 aa11.1□□□□□ -0.63
HPS1-210ENST00000474873 USP21Q9UK80 565 aa11.1□□□□□ -0.63
HPS1-210ENST00000474873 NRKQ7Z2Y5 1582 aa11.1□□□□□ -0.63
HPS1-210ENST00000474873 KIF7Q2M1P5 1343 aa11.09□□□□□ -0.63
HPS1-210ENST00000474873 ABCA3Q99758 1704 aa11.09□□□□□ -0.63
HPS1-210ENST00000474873 MARF1Q9Y4F3 1742 aaKnown RBP11.09□□□□□ -0.63
HPS1-210ENST00000474873 PIK3C2AO00443 1686 aa11.09□□□□□ -0.63
HPS1-210ENST00000474873 CPDO75976 1380 aa11.09□□□□□ -0.63
HPS1-210ENST00000474873 ZC3H6P61129 1189 aaKnown RBP11.09□□□□□ -0.63
HPS1-210ENST00000474873 CARD14Q9BXL6 1004 aa11.09□□□□□ -0.63
HPS1-210ENST00000474873 QTRT2Q9H974 415 aaKnown RBP11.09□□□□□ -0.63
HPS1-210ENST00000474873 CRYBG1Q9Y4K1 1723 aa11.09□□□□□ -0.63
HPS1-210ENST00000474873 SLIT2O94813 1529 aa11.09□□□□□ -0.63
HPS1-210ENST00000474873 BCL9LQ86UU0 1499 aa11.08□□□□□ -0.64
HPS1-210ENST00000474873 KIAA0232Q92628 1395 aa11.08□□□□□ -0.64
HPS1-210ENST00000474873 UNC5CLQ8IV45 518 aa11.08□□□□□ -0.64
HPS1-210ENST00000474873 ZRANB1Q9UGI0 708 aa11.08□□□□□ -0.64
HPS1-210ENST00000474873 FYB1O15117 783 aa11.07□□□□□ -0.64
HPS1-210ENST00000474873 COG3Q96JB2 828 aa11.07□□□□□ -0.64
HPS1-210ENST00000474873 PANK3Q9H999 370 aa11.07□□□□□ -0.64
HPS1-210ENST00000474873 BTG4Q9NY30 223 aa11.07□□□□□ -0.64
HPS1-210ENST00000474873 TRPC5Q9UL62 973 aaPredicted RBP11.07□□□□□ -0.64
HPS1-210ENST00000474873 SLIT3O75094 1523 aa11.07□□□□□ -0.64
HPS1-210ENST00000474873 MYOM1P52179 1685 aa11.07□□□□□ -0.64
HPS1-210ENST00000474873 PHRF1Q9P1Y6 1649 aaKnown RBP11.06□□□□□ -0.64
HPS1-210ENST00000474873 RXRBP28702 533 aa11.06□□□□□ -0.64
HPS1-210ENST00000474873 RBM6P78332 1123 aaKnown RBP11.06□□□□□ -0.64
HPS1-210ENST00000474873 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
HPS1-210ENST00000474873 CGNL1Q0VF96 1302 aa11.06□□□□□ -0.64
HPS1-210ENST00000474873 WASHC2AQ641Q2 1341 aa11.06□□□□□ -0.64
HPS1-210ENST00000474873 CCDC7Q96M83 1385 aa11.05□□□□□ -0.64
HPS1-210ENST00000474873 OVOS2A0A0J9YW53 1432 aa11.05□□□□□ -0.64
HPS1-210ENST00000474873 ATRNO75882 1429 aa11.05□□□□□ -0.64
HPS1-210ENST00000474873 OVOS2Q6IE36 1432 aa11.05□□□□□ -0.64
HPS1-210ENST00000474873 ARHGEF25Q86VW2 580 aa11.05□□□□□ -0.64
HPS1-210ENST00000474873 NSD3Q9BZ95 1437 aa11.05□□□□□ -0.64
HPS1-210ENST00000474873 COL14A1Q05707 1796 aaKnown RBP11.05□□□□□ -0.64
HPS1-210ENST00000474873 USP54Q70EL1 1684 aa11.04□□□□□ -0.64
HPS1-210ENST00000474873 AATKQ6ZMQ8 1374 aa11.04□□□□□ -0.64
HPS1-210ENST00000474873 NWD2Q9ULI1 1742 aa11.04□□□□□ -0.64
HPS1-210ENST00000474873 SOX12O15370 315 aa11.04□□□□□ -0.64
HPS1-210ENST00000474873 VPS72Q15906 364 aa11.04□□□□□ -0.64
HPS1-210ENST00000474873 GJD4Q96KN9 370 aaPredicted RBP11.04□□□□□ -0.64
HPS1-210ENST00000474873 GGNBP2Q9H3C7 697 aa11.04□□□□□ -0.64
HPS1-210ENST00000474873 NFAT5O94916 1531 aa11.03□□□□□ -0.64
HPS1-210ENST00000474873 PLCH1Q4KWH8 1693 aa11.02□□□□□ -0.64
HPS1-210ENST00000474873 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.02□□□□□ -0.65
HPS1-210ENST00000474873 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
HPS1-210ENST00000474873 EVA1CP58658 441 aa11.02□□□□□ -0.65
HPS1-210ENST00000474873 KNSTRNQ9Y448 316 aa11.02□□□□□ -0.65
HPS1-210ENST00000474873 CAMTA1Q9Y6Y1 1673 aa11.01□□□□□ -0.65
HPS1-210ENST00000474873 AXIN2Q9Y2T1 843 aa11.01□□□□□ -0.65
HPS1-210ENST00000474873 CDK12Q9NYV4 1490 aaPredicted RBP11□□□□□ -0.65
HPS1-210ENST00000474873 PER1O15534 1290 aaPredicted RBP11□□□□□ -0.65
HPS1-210ENST00000474873 ONECUT3O60422 494 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms