RNA–Protein interactions for RNA: ENST00000473956.5

CPA4-204, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-204ENST00000473956 KIF20BQ96Q89 1820 aa9.51□□□□□ -0.89
CPA4-204ENST00000473956 USP54Q70EL1 1684 aa9.51□□□□□ -0.89
CPA4-204ENST00000473956 SLC24A1O60721 1099 aa9.5□□□□□ -0.89
CPA4-204ENST00000473956 NGDNQ8NEJ9 315 aaKnown RBP9.5□□□□□ -0.89
CPA4-204ENST00000473956 NINLQ9Y2I6 1382 aa9.5□□□□□ -0.89
CPA4-204ENST00000473956 PHRF1Q9P1Y6 1649 aaKnown RBP9.49□□□□□ -0.89
CPA4-204ENST00000473956 TNS3Q68CZ2 1445 aa9.49□□□□□ -0.89
CPA4-204ENST00000473956 KRT28Q7Z3Y7 464 aa9.49□□□□□ -0.89
CPA4-204ENST00000473956 TMC1Q8TDI8 760 aa9.49□□□□□ -0.89
CPA4-204ENST00000473956 MED1Q15648 1581 aaPredicted RBP9.49□□□□□ -0.89
CPA4-204ENST00000473956 SBNO1A3KN83 1393 aa9.49□□□□□ -0.89
CPA4-204ENST00000473956 PNPLA6Q8IY17 1366 aa9.49□□□□□ -0.89
CPA4-204ENST00000473956 ANKRD36BQ8N2N9 1353 aa9.49□□□□□ -0.89
CPA4-204ENST00000473956 CDCA8Q53HL2 280 aa9.48□□□□□ -0.89
CPA4-204ENST00000473956 POLR3GLQ9BT43 218 aa9.48□□□□□ -0.89
CPA4-204ENST00000473956 SPATA31A3Q5VYP0 1347 aa9.48□□□□□ -0.89
CPA4-204ENST00000473956 KTN1Q86UP2 1357 aaKnown RBP9.48□□□□□ -0.89
CPA4-204ENST00000473956 ANKRD26Q9UPS8 1709 aa9.48□□□□□ -0.89
CPA4-204ENST00000473956 LRP6O75581 1613 aa9.47□□□□□ -0.89
CPA4-204ENST00000473956 PSME1Q06323 249 aa9.47□□□□□ -0.89
CPA4-204ENST00000473956 EDC4Q6P2E9 1401 aaKnown RBP9.47□□□□□ -0.89
CPA4-204ENST00000473956 CARD14Q9BXL6 1004 aa9.46□□□□□ -0.9
CPA4-204ENST00000473956 TTC21BQ7Z4L5 1316 aa9.46□□□□□ -0.9
CPA4-204ENST00000473956 JCADQ9P266 1359 aa9.46□□□□□ -0.9
CPA4-204ENST00000473956 NSD3Q9BZ95 1437 aa9.46□□□□□ -0.9
CPA4-204ENST00000473956 LRRC59Q96AG4 307 aaKnown RBP9.45□□□□□ -0.9
CPA4-204ENST00000473956 BRD4O60885 1362 aaPredicted RBP9.45□□□□□ -0.9
CPA4-204ENST00000473956 NUTM2GQ5VZR2 741 aa9.44□□□□□ -0.9
CPA4-204ENST00000473956 HDGFL2Q7Z4V5 671 aaPredicted RBP9.44□□□□□ -0.9
CPA4-204ENST00000473956 ZNF692Q9BU19 519 aaPredicted RBP9.44□□□□□ -0.9
CPA4-204ENST00000473956 TERF2IPQ9NYB0 399 aa9.44□□□□□ -0.9
CPA4-204ENST00000473956 ZRANB1Q9UGI0 708 aa9.44□□□□□ -0.9
CPA4-204ENST00000473956 OVOS2A0A0J9YW53 1432 aa9.44□□□□□ -0.9
CPA4-204ENST00000473956 OVOS2Q6IE36 1432 aa9.44□□□□□ -0.9
CPA4-204ENST00000473956 SLIT3O75094 1523 aa9.44□□□□□ -0.9
CPA4-204ENST00000473956 LTN1O94822 1766 aa9.43□□□□□ -0.9
CPA4-204ENST00000473956 RGPD5Q99666 1765 aa9.43□□□□□ -0.9
CPA4-204ENST00000473956 NFAT5O94916 1531 aa9.43□□□□□ -0.9
CPA4-204ENST00000473956 ARHGEF10O15013 1369 aa9.43□□□□□ -0.9
CPA4-204ENST00000473956 USP19O94966 1318 aa9.43□□□□□ -0.9
CPA4-204ENST00000473956 PAK3O75914 559 aaPredicted RBP9.43□□□□□ -0.9
CPA4-204ENST00000473956 NME9Q86XW9 330 aa9.43□□□□□ -0.9
CPA4-204ENST00000473956 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.43□□□□□ -0.9
CPA4-204ENST00000473956 CABLES1Q8TDN4 633 aa9.43□□□□□ -0.9
CPA4-204ENST00000473956 PANK3Q9H999 370 aa9.43□□□□□ -0.9
CPA4-204ENST00000473956 MAP2P11137 1827 aaKnown RBP9.42□□□□□ -0.9
CPA4-204ENST00000473956 TTC21AQ8NDW8 1320 aa9.42□□□□□ -0.9
CPA4-204ENST00000473956 COL18A1P39060 1754 aa9.42□□□□□ -0.9
CPA4-204ENST00000473956 PLCH1Q4KWH8 1693 aa9.42□□□□□ -0.9
CPA4-204ENST00000473956 USP31Q70CQ4 1352 aa9.41□□□□□ -0.9
CPA4-204ENST00000473956 PLEKHG5O94827 1062 aa9.41□□□□□ -0.9
CPA4-204ENST00000473956 LMOD2Q6P5Q4 547 aa9.41□□□□□ -0.9
CPA4-204ENST00000473956 NRAPQ86VF7 1730 aa9.4□□□□□ -0.9
CPA4-204ENST00000473956 LMO7Q8WWI1 1683 aa9.4□□□□□ -0.9
CPA4-204ENST00000473956 FYB1O15117 783 aa9.4□□□□□ -0.9
CPA4-204ENST00000473956 PER1O15534 1290 aaPredicted RBP9.4□□□□□ -0.9
CPA4-204ENST00000473956 ABTB2Q8N961 1025 aa9.4□□□□□ -0.9
CPA4-204ENST00000473956 PEAK1Q9H792 1746 aa9.39□□□□□ -0.91
CPA4-204ENST00000473956 SPATA31A6Q5VVP1 1343 aa9.39□□□□□ -0.91
CPA4-204ENST00000473956 ZNF316A6NFI3 1004 aaPredicted RBP9.39□□□□□ -0.91
CPA4-204ENST00000473956 NUTM2BA6NNL0 878 aaPredicted RBP9.39□□□□□ -0.91
CPA4-204ENST00000473956 NUTM2EB1AL46 878 aaPredicted RBP9.39□□□□□ -0.91
CPA4-204ENST00000473956 AMER1Q5JTC6 1135 aaPredicted RBP9.39□□□□□ -0.91
CPA4-204ENST00000473956 NUTM2AQ8IVF1 878 aaPredicted RBP9.39□□□□□ -0.91
CPA4-204ENST00000473956 NWD2Q9ULI1 1742 aa9.39□□□□□ -0.91
CPA4-204ENST00000473956 COL14A1Q05707 1796 aaKnown RBP9.38□□□□□ -0.91
CPA4-204ENST00000473956 NLRP6P59044 892 aa9.38□□□□□ -0.91
CPA4-204ENST00000473956 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
CPA4-204ENST00000473956 EP400Q96L91 3159 aa9.38□□□□□ -0.91
CPA4-204ENST00000473956 CGNL1Q0VF96 1302 aa9.37□□□□□ -0.91
CPA4-204ENST00000473956 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.37□□□□□ -0.91
CPA4-204ENST00000473956 GCP02774 474 aa9.37□□□□□ -0.91
CPA4-204ENST00000473956 FBLN1P23142 703 aa9.37□□□□□ -0.91
CPA4-204ENST00000473956 DDX10Q13206 875 aaKnown RBP9.37□□□□□ -0.91
CPA4-204ENST00000473956 NLRP13Q86W25 1043 aa9.37□□□□□ -0.91
CPA4-204ENST00000473956 RGPD2P0DJD1 1756 aa9.37□□□□□ -0.91
CPA4-204ENST00000473956 KIAA0232Q92628 1395 aa9.37□□□□□ -0.91
CPA4-204ENST00000473956 ADAMTS2O95450 1211 aa9.36□□□□□ -0.91
CPA4-204ENST00000473956 CPDO75976 1380 aa9.36□□□□□ -0.91
CPA4-204ENST00000473956 SLIT2O94813 1529 aa9.36□□□□□ -0.91
CPA4-204ENST00000473956 CAMTA1Q9Y6Y1 1673 aa9.36□□□□□ -0.91
CPA4-204ENST00000473956 SOX12O15370 315 aa9.35□□□□□ -0.91
CPA4-204ENST00000473956 ZC3H6P61129 1189 aaKnown RBP9.35□□□□□ -0.91
CPA4-204ENST00000473956 KNSTRNQ9Y448 316 aa9.35□□□□□ -0.91
CPA4-204ENST00000473956 NSD2O96028 1365 aa9.35□□□□□ -0.91
CPA4-204ENST00000473956 NPC1L1Q9UHC9 1359 aa9.35□□□□□ -0.91
CPA4-204ENST00000473956 FAM83GA6ND36 823 aa9.34□□□□□ -0.91
CPA4-204ENST00000473956 CHRNA2Q15822 529 aa9.34□□□□□ -0.91
CPA4-204ENST00000473956 COG3Q96JB2 828 aa9.34□□□□□ -0.91
CPA4-204ENST00000473956 ABCC6O95255 1503 aa9.34□□□□□ -0.91
CPA4-204ENST00000473956 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
CPA4-204ENST00000473956 ARHGEF25Q86VW2 580 aa9.33□□□□□ -0.92
CPA4-204ENST00000473956 C8orf37Q96NL8 207 aa9.33□□□□□ -0.92
CPA4-204ENST00000473956 RGS17Q9UGC6 210 aaPredicted RBP9.33□□□□□ -0.92
CPA4-204ENST00000473956 BCL9LQ86UU0 1499 aa9.33□□□□□ -0.92
CPA4-204ENST00000473956 MAP3K19Q56UN5 1328 aa9.32□□□□□ -0.92
CPA4-204ENST00000473956 SMG6Q86US8 1419 aaKnown RBP9.32□□□□□ -0.92
CPA4-204ENST00000473956 DCAF8L1A6NGE4 600 aa9.32□□□□□ -0.92
CPA4-204ENST00000473956 HAP1P54257 671 aaPredicted RBP9.32□□□□□ -0.92
CPA4-204ENST00000473956 RRS1Q15050 365 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms