RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 INSRP06213 1382 aa8.24□□□□□ -1.09
CLK1-210ENST00000473565 PTCH1Q13635 1447 aa8.24□□□□□ -1.09
CLK1-210ENST00000473565 EDC4Q6P2E9 1401 aaKnown RBP8.24□□□□□ -1.09
CLK1-210ENST00000473565 DIP2AQ14689 1571 aa8.24□□□□□ -1.09
CLK1-210ENST00000473565 RRS1Q15050 365 aaKnown RBP8.24□□□□□ -1.09
CLK1-210ENST00000473565 MON2Q7Z3U7 1717 aa8.23□□□□□ -1.09
CLK1-210ENST00000473565 AKAP12Q02952 1782 aa8.23□□□□□ -1.09
CLK1-210ENST00000473565 RCAN3Q9UKA8 241 aa8.23□□□□□ -1.09
CLK1-210ENST00000473565 ZNF521Q96K83 1311 aa8.23□□□□□ -1.09
CLK1-210ENST00000473565 MAP2P11137 1827 aaKnown RBP8.23□□□□□ -1.09
CLK1-210ENST00000473565 PDE3BQ13370 1112 aa8.23□□□□□ -1.09
CLK1-210ENST00000473565 POLKQ9UBT6 870 aa8.23□□□□□ -1.09
CLK1-210ENST00000473565 COL3A1P02461 1466 aaPredicted RBP8.23□□□□□ -1.09
CLK1-210ENST00000473565 TOPAZ1Q8N9V7 1692 aa8.22□□□□□ -1.09
CLK1-210ENST00000473565 HSPA2P54652 639 aa8.22□□□□□ -1.09
CLK1-210ENST00000473565 TCP11L2Q8N4U5 519 aa8.22□□□□□ -1.09
CLK1-210ENST00000473565 PLIN1O60240 522 aa8.22□□□□□ -1.09
CLK1-210ENST00000473565 TTC21BQ7Z4L5 1316 aa8.22□□□□□ -1.09
CLK1-210ENST00000473565 CHD2O14647 1828 aaKnown RBP8.22□□□□□ -1.09
CLK1-210ENST00000473565 GOLGA2Q08379 1002 aa8.22□□□□□ -1.09
CLK1-210ENST00000473565 B4GALNT3Q6L9W6 998 aa8.22□□□□□ -1.09
CLK1-210ENST00000473565 NGDNQ8NEJ9 315 aaKnown RBP8.22□□□□□ -1.09
CLK1-210ENST00000473565 RUNDC1Q96C34 613 aa8.22□□□□□ -1.09
CLK1-210ENST00000473565 COG3Q96JB2 828 aa8.22□□□□□ -1.09
CLK1-210ENST00000473565 NPHP4O75161 1426 aaPredicted RBP8.21□□□□□ -1.09
CLK1-210ENST00000473565 PLEKHG3A1L390 1219 aa8.21□□□□□ -1.09
CLK1-210ENST00000473565 DUSP27Q5VZP5 1158 aa8.21□□□□□ -1.09
CLK1-210ENST00000473565 NUTM2GQ5VZR2 741 aa8.21□□□□□ -1.1
CLK1-210ENST00000473565 RNF123Q5XPI4 1314 aa8.21□□□□□ -1.1
CLK1-210ENST00000473565 NALCNQ8IZF0 1738 aa8.21□□□□□ -1.1
CLK1-210ENST00000473565 DIAPH1O60610 1272 aaKnown RBP8.2□□□□□ -1.1
CLK1-210ENST00000473565 C14orf37Q86TY3 774 aa8.2□□□□□ -1.1
CLK1-210ENST00000473565 USP6P35125 1406 aa8.2□□□□□ -1.1
CLK1-210ENST00000473565 HMOX1P09601 288 aa8.2□□□□□ -1.1
CLK1-210ENST00000473565 RRP1P56182 461 aaKnown RBP8.2□□□□□ -1.1
CLK1-210ENST00000473565 WWC1Q8IX03 1113 aa8.2□□□□□ -1.1
CLK1-210ENST00000473565 ZNF692Q9BU19 519 aaPredicted RBP8.2□□□□□ -1.1
CLK1-210ENST00000473565 NRKQ7Z2Y5 1582 aa8.2□□□□□ -1.1
CLK1-210ENST00000473565 SLFN5Q08AF3 891 aa8.2□□□□□ -1.1
CLK1-210ENST00000473565 PIK3R4Q99570 1358 aa8.19□□□□□ -1.1
CLK1-210ENST00000473565 PLEKHG5O94827 1062 aa8.19□□□□□ -1.1
CLK1-210ENST00000473565 IQSEC2Q5JU85 1478 aa8.19□□□□□ -1.1
CLK1-210ENST00000473565 PNPLA6Q8IY17 1366 aa8.18□□□□□ -1.1
CLK1-210ENST00000473565 FMN2Q9NZ56 1722 aa8.18□□□□□ -1.1
CLK1-210ENST00000473565 PAK3O75914 559 aaPredicted RBP8.18□□□□□ -1.1
CLK1-210ENST00000473565 EXOC6Q8TAG9 804 aa8.18□□□□□ -1.1
CLK1-210ENST00000473565 PLEKHF1Q96S99 279 aa8.18□□□□□ -1.1
CLK1-210ENST00000473565 PPP4R2Q9NY27 417 aa8.18□□□□□ -1.1
CLK1-210ENST00000473565 KDM4FA0A1W2PPD8 638 aa8.17□□□□□ -1.1
CLK1-210ENST00000473565 XPCQ01831 940 aaPredicted RBP8.17□□□□□ -1.1
CLK1-210ENST00000473565 PRKAR2BP31323 418 aa8.17□□□□□ -1.1
CLK1-210ENST00000473565 C20orf194Q5TEA3 1177 aa8.17□□□□□ -1.1
CLK1-210ENST00000473565 OVOS2A0A0J9YW53 1432 aa8.17□□□□□ -1.1
CLK1-210ENST00000473565 OVOS2Q6IE36 1432 aa8.17□□□□□ -1.1
CLK1-210ENST00000473565 SSH2Q76I76 1423 aa8.17□□□□□ -1.1
CLK1-210ENST00000473565 LRRC7Q96NW7 1537 aa8.17□□□□□ -1.1
CLK1-210ENST00000473565 MAPK8IP3Q9UPT6 1336 aa8.16□□□□□ -1.1
CLK1-210ENST00000473565 TRMT2AQ8IZ69 625 aaKnown RBP8.16□□□□□ -1.1
CLK1-210ENST00000473565 PHACTR3Q96KR7 559 aa8.16□□□□□ -1.1
CLK1-210ENST00000473565 IL13P35225 146 aa8.16□□□□□ -1.1
CLK1-210ENST00000473565 TMPOP42166 694 aaKnown RBP8.16□□□□□ -1.1
CLK1-210ENST00000473565 HSP90AB2PQ58FF8 381 aa8.16□□□□□ -1.1
CLK1-210ENST00000473565 ESCO1Q5FWF5 840 aa8.16□□□□□ -1.1
CLK1-210ENST00000473565 PROSER2Q86WR7 435 aaPredicted RBP8.16□□□□□ -1.1
CLK1-210ENST00000473565 E9PSI1 815 aa8.16□□□□□ -1.1
CLK1-210ENST00000473565 ORAI2Q96SN7 254 aa8.16□□□□□ -1.1
CLK1-210ENST00000473565 RSPH6AQ9H0K4 717 aa8.16□□□□□ -1.1
CLK1-210ENST00000473565 PHF8Q9UPP1 1060 aa8.16□□□□□ -1.1
CLK1-210ENST00000473565 ADGRL3Q9HAR2 1447 aa8.15□□□□□ -1.1
CLK1-210ENST00000473565 PIK3C2AO00443 1686 aa8.15□□□□□ -1.1
CLK1-210ENST00000473565 BCAR3O75815 825 aa8.15□□□□□ -1.1
CLK1-210ENST00000473565 NLRP6P59044 892 aa8.15□□□□□ -1.1
CLK1-210ENST00000473565 AEBP1Q8IUX7 1158 aa8.15□□□□□ -1.1
CLK1-210ENST00000473565 TSR2Q969E8 191 aaKnown RBP8.15□□□□□ -1.1
CLK1-210ENST00000473565 PHF23Q9BUL5 403 aaPredicted RBP8.15□□□□□ -1.1
CLK1-210ENST00000473565 CDK12Q9NYV4 1490 aaPredicted RBP8.15□□□□□ -1.1
CLK1-210ENST00000473565 PEAK1Q9H792 1746 aa8.15□□□□□ -1.1
CLK1-210ENST00000473565 AATKQ6ZMQ8 1374 aa8.15□□□□□ -1.1
CLK1-210ENST00000473565 TRIM35Q9UPQ4 493 aa8.15□□□□□ -1.11
CLK1-210ENST00000473565 ANKARQ7Z5J8 1434 aa8.15□□□□□ -1.11
CLK1-210ENST00000473565 RIPK4P57078 832 aa8.14□□□□□ -1.11
CLK1-210ENST00000473565 THUMPD2Q9BTF0 503 aaKnown RBP8.14□□□□□ -1.11
CLK1-210ENST00000473565 MAP3K19Q56UN5 1328 aa8.14□□□□□ -1.11
CLK1-210ENST00000473565 EIF4A2Q14240 407 aaKnown RBP8.14□□□□□ -1.11
CLK1-210ENST00000473565 ABTB2Q8N961 1025 aa8.14□□□□□ -1.11
CLK1-210ENST00000473565 CRBNQ96SW2 442 aa8.14□□□□□ -1.11
CLK1-210ENST00000473565 FOXO3O43524 673 aa8.14□□□□□ -1.11
CLK1-210ENST00000473565 ERICH6BQ5W0A0 696 aa8.14□□□□□ -1.11
CLK1-210ENST00000473565 STRCP1A6NGW2 1772 aa8.13□□□□□ -1.11
CLK1-210ENST00000473565 CCDC136Q96JN2 1154 aa8.13□□□□□ -1.11
CLK1-210ENST00000473565 BCL2L13Q9BXK5 485 aa8.13□□□□□ -1.11
CLK1-210ENST00000473565 TTC21AQ8NDW8 1320 aa8.13□□□□□ -1.11
CLK1-210ENST00000473565 ZBTB7CA1YPR0 619 aa8.13□□□□□ -1.11
CLK1-210ENST00000473565 FCHSD2O94868 740 aa8.13□□□□□ -1.11
CLK1-210ENST00000473565 SULT6B1Q6IMI4 303 aa8.12□□□□□ -1.11
CLK1-210ENST00000473565 DDX17Q92841 729 aaKnown RBP8.12□□□□□ -1.11
CLK1-210ENST00000473565 USP31Q70CQ4 1352 aa8.12□□□□□ -1.11
CLK1-210ENST00000473565 PSME1Q06323 249 aa8.12□□□□□ -1.11
CLK1-210ENST00000473565 LMOD2Q6P5Q4 547 aa8.12□□□□□ -1.11
CLK1-210ENST00000473565 WDR63Q8IWG1 891 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms