RNA–Protein interactions for RNA: ENST00000473562.1

NOTCH4-203, Transcript of notch 4, humanhuman

TSL 1 (best)

Gene NOTCH4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-203ENST00000473562 SMC5Q8IY18 1101 aa16.53■□□□□ 0.24
NOTCH4-203ENST00000473562 FYB1O15117 783 aa16.52■□□□□ 0.24
NOTCH4-203ENST00000473562 A0A1W2PP64 1363 aa16.52■□□□□ 0.24
NOTCH4-203ENST00000473562 ADGRL1O94910 1474 aa16.52■□□□□ 0.24
NOTCH4-203ENST00000473562 TPRNQ4KMQ1 711 aa16.52■□□□□ 0.23
NOTCH4-203ENST00000473562 C16orf71Q8IYS4 520 aaPredicted RBP16.52■□□□□ 0.23
NOTCH4-203ENST00000473562 ATP7AQ04656 1500 aa16.51■□□□□ 0.23
NOTCH4-203ENST00000473562 HDAC1Q13547 482 aaPredicted RBP16.51■□□□□ 0.23
NOTCH4-203ENST00000473562 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
NOTCH4-203ENST00000473562 STAC3Q96MF2 364 aa16.51■□□□□ 0.23
NOTCH4-203ENST00000473562 CCDC27Q2M243 656 aa16.51■□□□□ 0.23
NOTCH4-203ENST00000473562 AK9Q5TCS8 1911 aa16.51■□□□□ 0.23
NOTCH4-203ENST00000473562 FAM83GA6ND36 823 aa16.51■□□□□ 0.23
NOTCH4-203ENST00000473562 RAPGEF3O95398 923 aa16.51■□□□□ 0.23
NOTCH4-203ENST00000473562 NUCB1Q02818 461 aa16.5■□□□□ 0.23
NOTCH4-203ENST00000473562 TBC1D9Q6ZT07 1266 aa16.5■□□□□ 0.23
NOTCH4-203ENST00000473562 PRAM1Q96QH2 718 aa16.5■□□□□ 0.23
NOTCH4-203ENST00000473562 KIF2CQ99661 725 aa16.5■□□□□ 0.23
NOTCH4-203ENST00000473562 ARID3AQ99856 593 aa16.5■□□□□ 0.23
NOTCH4-203ENST00000473562 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
NOTCH4-203ENST00000473562 MRE11P49959 708 aa16.49■□□□□ 0.23
NOTCH4-203ENST00000473562 PKP1Q13835 747 aa16.49■□□□□ 0.23
NOTCH4-203ENST00000473562 DIAPH1O60610 1272 aaKnown RBP16.49■□□□□ 0.23
NOTCH4-203ENST00000473562 TRIM44Q96DX7 344 aaPredicted RBP16.49■□□□□ 0.23
NOTCH4-203ENST00000473562 CABP1Q9NZU7 370 aa16.49■□□□□ 0.23
NOTCH4-203ENST00000473562 TET3O43151 1660 aa16.49■□□□□ 0.23
NOTCH4-203ENST00000473562 SHROOM2Q13796 1616 aa16.49■□□□□ 0.23
NOTCH4-203ENST00000473562 KRT24Q2M2I5 525 aa16.49■□□□□ 0.23
NOTCH4-203ENST00000473562 OTUD7AQ8TE49 926 aaPredicted RBP16.49■□□□□ 0.23
NOTCH4-203ENST00000473562 ESPNB1AK53 854 aa16.48■□□□□ 0.23
NOTCH4-203ENST00000473562 SIRT2Q8IXJ6 389 aa16.48■□□□□ 0.23
NOTCH4-203ENST00000473562 VSIG10Q8N0Z9 540 aa16.47■□□□□ 0.23
NOTCH4-203ENST00000473562 DDX11L8A8MPP1 907 aa16.47■□□□□ 0.23
NOTCH4-203ENST00000473562 SLC24A1O60721 1099 aa16.47■□□□□ 0.23
NOTCH4-203ENST00000473562 NPATQ14207 1427 aa16.46■□□□□ 0.23
NOTCH4-203ENST00000473562 FOXD4L6Q3SYB3 417 aaPredicted RBP16.46■□□□□ 0.23
NOTCH4-203ENST00000473562 FOXD4L3Q6VB84 417 aaPredicted RBP16.46■□□□□ 0.23
NOTCH4-203ENST00000473562 EMILIN1Q9Y6C2 1016 aa16.46■□□□□ 0.23
NOTCH4-203ENST00000473562 SOX12O15370 315 aa16.46■□□□□ 0.23
NOTCH4-203ENST00000473562 SMARCA5O60264 1052 aaPredicted RBP16.46■□□□□ 0.23
NOTCH4-203ENST00000473562 CLCN1P35523 988 aa16.46■□□□□ 0.23
NOTCH4-203ENST00000473562 IDI1Q13907 227 aa16.46■□□□□ 0.23
NOTCH4-203ENST00000473562 KIF1BO60333 1816 aa16.46■□□□□ 0.22
NOTCH4-203ENST00000473562 QRICH2Q9H0J4 1663 aa16.46■□□□□ 0.22
NOTCH4-203ENST00000473562 ANKRD36BQ8N2N9 1353 aa16.45■□□□□ 0.22
NOTCH4-203ENST00000473562 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
NOTCH4-203ENST00000473562 NOL8Q76FK4 1167 aaKnown RBP16.44■□□□□ 0.22
NOTCH4-203ENST00000473562 WAPLQ7Z5K2 1190 aa16.44■□□□□ 0.22
NOTCH4-203ENST00000473562 DDX49Q9Y6V7 483 aaKnown RBP16.44■□□□□ 0.22
NOTCH4-203ENST00000473562 MYOM2P54296 1465 aa16.44■□□□□ 0.22
NOTCH4-203ENST00000473562 PPRC1Q5VV67 1664 aaKnown RBP16.44■□□□□ 0.22
NOTCH4-203ENST00000473562 IPO8O15397 1037 aaKnown RBP16.44■□□□□ 0.22
NOTCH4-203ENST00000473562 MCTP1Q6DN14 999 aa16.44■□□□□ 0.22
NOTCH4-203ENST00000473562 ZBTB7BO15156 539 aaPredicted RBP16.44■□□□□ 0.22
NOTCH4-203ENST00000473562 PPIP5K1Q6PFW1 1433 aa16.43■□□□□ 0.22
NOTCH4-203ENST00000473562 RBM25P49756 843 aaKnown RBP16.43■□□□□ 0.22
NOTCH4-203ENST00000473562 AAMPQ13685 434 aa16.43■□□□□ 0.22
NOTCH4-203ENST00000473562 HSP90AA2PQ14568 343 aaPredicted RBP16.43■□□□□ 0.22
NOTCH4-203ENST00000473562 MPNDQ8N594 471 aa16.43■□□□□ 0.22
NOTCH4-203ENST00000473562 C8orf58Q8NAV2 365 aa16.43■□□□□ 0.22
NOTCH4-203ENST00000473562 DDIT3P35638 169 aa16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 TULP4Q9NRJ4 1543 aa16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 SBNO2Q9Y2G9 1366 aa16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 GSPT1P15170 499 aaKnown RBP16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 TSHZ3Q63HK5 1081 aa16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 GBP4Q96PP9 640 aa16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 MROH1Q8NDA8 1641 aa16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 K7ELQ4 463 aaPredicted RBP16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 RAB3GAP1Q15042 981 aa16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 CAVIN1Q6NZI2 390 aaKnown RBP16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 RBM27Q9P2N5 1060 aaKnown RBP16.42■□□□□ 0.22
NOTCH4-203ENST00000473562 NUTM2FA1L443 756 aa16.41■□□□□ 0.22
NOTCH4-203ENST00000473562 DTNBO60941 627 aa16.41■□□□□ 0.22
NOTCH4-203ENST00000473562 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
NOTCH4-203ENST00000473562 VAMP4O75379 141 aa16.4■□□□□ 0.22
NOTCH4-203ENST00000473562 FBXO31Q5XUX0 539 aaPredicted RBP16.4■□□□□ 0.22
NOTCH4-203ENST00000473562 ZGPATQ8N5A5 531 aaKnown RBP16.4■□□□□ 0.22
NOTCH4-203ENST00000473562 CDK19Q9BWU1 502 aa16.4■□□□□ 0.22
NOTCH4-203ENST00000473562 VGFO15240 615 aaPredicted RBP16.39■□□□□ 0.22
NOTCH4-203ENST00000473562 RBM10P98175 930 aaKnown RBP16.39■□□□□ 0.22
NOTCH4-203ENST00000473562 BMP2KLQ5H9B9 411 aa16.39■□□□□ 0.22
NOTCH4-203ENST00000473562 EFCAB6Q5THR3 1501 aa16.39■□□□□ 0.21
NOTCH4-203ENST00000473562 ADGRB1O14514 1584 aa16.39■□□□□ 0.21
NOTCH4-203ENST00000473562 DEPDC5O75140 1603 aa16.39■□□□□ 0.21
NOTCH4-203ENST00000473562 NASPP49321 788 aaPredicted RBP16.38■□□□□ 0.21
NOTCH4-203ENST00000473562 MRPL50Q8N5N7 158 aaKnown RBP16.38■□□□□ 0.21
NOTCH4-203ENST00000473562 TERF2IPQ9NYB0 399 aa16.38■□□□□ 0.21
NOTCH4-203ENST00000473562 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
NOTCH4-203ENST00000473562 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
NOTCH4-203ENST00000473562 TWISTNBQ3B726 338 aaPredicted RBP16.38■□□□□ 0.21
NOTCH4-203ENST00000473562 NME9Q86XW9 330 aa16.37■□□□□ 0.21
NOTCH4-203ENST00000473562 KIAA1210Q9ULL0 1709 aa16.37■□□□□ 0.21
NOTCH4-203ENST00000473562 BAG4O95429 457 aaKnown RBP16.37■□□□□ 0.21
NOTCH4-203ENST00000473562 SNX21Q969T3 373 aa16.36■□□□□ 0.21
NOTCH4-203ENST00000473562 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
NOTCH4-203ENST00000473562 VWDEQ8N2E2 1590 aa16.36■□□□□ 0.21
NOTCH4-203ENST00000473562 ABCC11Q96J66 1382 aa16.36■□□□□ 0.21
NOTCH4-203ENST00000473562 PRPF40AO75400 957 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms