RNA–Protein interactions for RNA: ENST00000472921.1

CCDC13-204, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 314 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-204ENST00000472921 PSME1Q06323 249 aa16.35■□□□□ 0.21
CCDC13-204ENST00000472921 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
CCDC13-204ENST00000472921 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
CCDC13-204ENST00000472921 USP31Q70CQ4 1352 aa16.35■□□□□ 0.21
CCDC13-204ENST00000472921 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
CCDC13-204ENST00000472921 FOXO3O43524 673 aa16.34■□□□□ 0.21
CCDC13-204ENST00000472921 MORC1Q86VD1 984 aa16.34■□□□□ 0.21
CCDC13-204ENST00000472921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.34■□□□□ 0.21
CCDC13-204ENST00000472921 NPHP3Q7Z494 1330 aa16.34■□□□□ 0.21
CCDC13-204ENST00000472921 KRT28Q7Z3Y7 464 aa16.33■□□□□ 0.2
CCDC13-204ENST00000472921 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
CCDC13-204ENST00000472921 SBNO1A3KN83 1393 aa16.32■□□□□ 0.2
CCDC13-204ENST00000472921 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
CCDC13-204ENST00000472921 NME9Q86XW9 330 aa16.32■□□□□ 0.2
CCDC13-204ENST00000472921 TOM1O60784 492 aa16.31■□□□□ 0.2
CCDC13-204ENST00000472921 PPP2R1AP30153 589 aa16.31■□□□□ 0.2
CCDC13-204ENST00000472921 COG3Q96JB2 828 aa16.31■□□□□ 0.2
CCDC13-204ENST00000472921 OVOS2A0A0J9YW53 1432 aa16.29■□□□□ 0.2
CCDC13-204ENST00000472921 OVOS2Q6IE36 1432 aa16.29■□□□□ 0.2
CCDC13-204ENST00000472921 AATKQ6ZMQ8 1374 aa16.29■□□□□ 0.2
CCDC13-204ENST00000472921 SOS2Q07890 1332 aaPredicted RBP16.29■□□□□ 0.2
CCDC13-204ENST00000472921 CERKQ8TCT0 537 aa16.29■□□□□ 0.2
CCDC13-204ENST00000472921 CNGB1Q14028 1251 aaPredicted RBP16.28■□□□□ 0.2
CCDC13-204ENST00000472921 ABTB2Q8N961 1025 aa16.27■□□□□ 0.2
CCDC13-204ENST00000472921 PXDNQ92626 1479 aa16.27■□□□□ 0.19
CCDC13-204ENST00000472921 ANKRD26Q9UPS8 1709 aa16.26■□□□□ 0.19
CCDC13-204ENST00000472921 PAK3O75914 559 aaPredicted RBP16.26■□□□□ 0.19
CCDC13-204ENST00000472921 NLRP6P59044 892 aa16.26■□□□□ 0.19
CCDC13-204ENST00000472921 ZRANB1Q9UGI0 708 aa16.26■□□□□ 0.19
CCDC13-204ENST00000472921 USP54Q70EL1 1684 aa16.26■□□□□ 0.19
CCDC13-204ENST00000472921 KIF20BQ96Q89 1820 aa16.26■□□□□ 0.19
CCDC13-204ENST00000472921 SPATA31A3Q5VYP0 1347 aa16.25■□□□□ 0.19
CCDC13-204ENST00000472921 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
CCDC13-204ENST00000472921 CCDC184Q52MB2 194 aa16.24■□□□□ 0.19
CCDC13-204ENST00000472921 INSRP06213 1382 aa16.24■□□□□ 0.19
CCDC13-204ENST00000472921 PIK3C2AO00443 1686 aa16.24■□□□□ 0.19
CCDC13-204ENST00000472921 DDX17Q92841 729 aaKnown RBP16.23■□□□□ 0.19
CCDC13-204ENST00000472921 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
CCDC13-204ENST00000472921 POLKQ9UBT6 870 aa16.23■□□□□ 0.19
CCDC13-204ENST00000472921 USP19O94966 1318 aa16.22■□□□□ 0.19
CCDC13-204ENST00000472921 TNS3Q68CZ2 1445 aa16.22■□□□□ 0.19
CCDC13-204ENST00000472921 MTHFSP49914 203 aa16.22■□□□□ 0.19
CCDC13-204ENST00000472921 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
CCDC13-204ENST00000472921 KCNH5Q8NCM2 988 aa16.22■□□□□ 0.19
CCDC13-204ENST00000472921 ARHGEF10O15013 1369 aa16.22■□□□□ 0.19
CCDC13-204ENST00000472921 PNPLA6Q8IY17 1366 aa16.22■□□□□ 0.19
CCDC13-204ENST00000472921 SMG6Q86US8 1419 aaKnown RBP16.21■□□□□ 0.19
CCDC13-204ENST00000472921 NHSL1Q5SYE7 1610 aa16.21■□□□□ 0.19
CCDC13-204ENST00000472921 AHDC1Q5TGY3 1603 aaPredicted RBP16.21■□□□□ 0.19
CCDC13-204ENST00000472921 UBAP1LF5GYI3 381 aa16.21■□□□□ 0.19
CCDC13-204ENST00000472921 PNISRQ8TF01 805 aaKnown RBP16.21■□□□□ 0.19
CCDC13-204ENST00000472921 TNNT2P45379 298 aaPredicted RBP16.2■□□□□ 0.18
CCDC13-204ENST00000472921 KIF24Q5T7B8 1368 aa16.2■□□□□ 0.18
CCDC13-204ENST00000472921 ALS2Q96Q42 1657 aa16.2■□□□□ 0.18
CCDC13-204ENST00000472921 ROBO1Q9Y6N7 1651 aa16.19■□□□□ 0.18
CCDC13-204ENST00000472921 LRRC59Q96AG4 307 aaKnown RBP16.19■□□□□ 0.18
CCDC13-204ENST00000472921 GCP02774 474 aa16.18■□□□□ 0.18
CCDC13-204ENST00000472921 CFAP53Q96M91 514 aa16.18■□□□□ 0.18
CCDC13-204ENST00000472921 SLIT3O75094 1523 aa16.18■□□□□ 0.18
CCDC13-204ENST00000472921 NUTM2GQ5VZR2 741 aa16.17■□□□□ 0.18
CCDC13-204ENST00000472921 FBLN1P23142 703 aa16.16■□□□□ 0.18
CCDC13-204ENST00000472921 MARF1Q9Y4F3 1742 aaKnown RBP16.16■□□□□ 0.18
CCDC13-204ENST00000472921 MED1Q15648 1581 aaPredicted RBP16.15■□□□□ 0.18
CCDC13-204ENST00000472921 LMOD2Q6P5Q4 547 aa16.15■□□□□ 0.18
CCDC13-204ENST00000472921 EMILIN1Q9Y6C2 1016 aa16.15■□□□□ 0.18
CCDC13-204ENST00000472921 NFAT5O94916 1531 aa16.14■□□□□ 0.18
CCDC13-204ENST00000472921 RRS1Q15050 365 aaKnown RBP16.14■□□□□ 0.17
CCDC13-204ENST00000472921 ARHGEF25Q86VW2 580 aa16.14■□□□□ 0.17
CCDC13-204ENST00000472921 CDK12Q9NYV4 1490 aaPredicted RBP16.14■□□□□ 0.17
CCDC13-204ENST00000472921 MAP3K19Q56UN5 1328 aa16.14■□□□□ 0.17
CCDC13-204ENST00000472921 PIP4K2BP78356 416 aa16.13■□□□□ 0.17
CCDC13-204ENST00000472921 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
CCDC13-204ENST00000472921 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
CCDC13-204ENST00000472921 FLT4P35916 1363 aa16.12■□□□□ 0.17
CCDC13-204ENST00000472921 DIAPH1O60610 1272 aaKnown RBP16.11■□□□□ 0.17
CCDC13-204ENST00000472921 IP6K1Q92551 441 aa16.11■□□□□ 0.17
CCDC13-204ENST00000472921 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
CCDC13-204ENST00000472921 CPDO75976 1380 aa16.11■□□□□ 0.17
CCDC13-204ENST00000472921 HOXC9P31274 260 aa16.1■□□□□ 0.17
CCDC13-204ENST00000472921 IL13P35225 146 aa16.1■□□□□ 0.17
CCDC13-204ENST00000472921 FAM9BQ8IZU0 186 aa16.1■□□□□ 0.17
CCDC13-204ENST00000472921 PHRF1Q9P1Y6 1649 aaKnown RBP16.09■□□□□ 0.17
CCDC13-204ENST00000472921 AMPHP49418 695 aa16.09■□□□□ 0.17
CCDC13-204ENST00000472921 WDR43Q15061 677 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCDC13-204ENST00000472921 ADAMTS8Q9UP79 889 aa16.09■□□□□ 0.17
CCDC13-204ENST00000472921 COL16A1Q07092 1604 aaPredicted RBP16.08■□□□□ 0.17
CCDC13-204ENST00000472921 PPM1GO15355 546 aaPredicted RBP16.08■□□□□ 0.16
CCDC13-204ENST00000472921 HSP90AB2PQ58FF8 381 aa16.08■□□□□ 0.16
CCDC13-204ENST00000472921 MAP2P11137 1827 aaKnown RBP16.08■□□□□ 0.16
CCDC13-204ENST00000472921 SOX12O15370 315 aa16.07■□□□□ 0.16
CCDC13-204ENST00000472921 ABCC6O95255 1503 aa16.07■□□□□ 0.16
CCDC13-204ENST00000472921 COL22A1Q8NFW1 1626 aaPredicted RBP16.07■□□□□ 0.16
CCDC13-204ENST00000472921 CRYBG1Q9Y4K1 1723 aa16.07■□□□□ 0.16
CCDC13-204ENST00000472921 PHLPP1O60346 1717 aa16.06■□□□□ 0.16
CCDC13-204ENST00000472921 EIF4A2Q14240 407 aaKnown RBP16.06■□□□□ 0.16
CCDC13-204ENST00000472921 CABLES1Q8TDN4 633 aa16.06■□□□□ 0.16
CCDC13-204ENST00000472921 PEAK1Q9H792 1746 aa16.05■□□□□ 0.16
CCDC13-204ENST00000472921 BLMP54132 1417 aaPredicted RBP16.05■□□□□ 0.16
CCDC13-204ENST00000472921 FCHSD2O94868 740 aa16.04■□□□□ 0.16
CCDC13-204ENST00000472921 ZC3H6P61129 1189 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms