RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 KTN1Q86UP2 1357 aaKnown RBP17.8■□□□□ 0.44
SEC16A-209ENST00000472305 ANKRD36BQ8N2N9 1353 aa17.8■□□□□ 0.44
SEC16A-209ENST00000472305 NINLQ9Y2I6 1382 aa17.8■□□□□ 0.44
SEC16A-209ENST00000472305 ZNF316A6NFI3 1004 aaPredicted RBP17.8■□□□□ 0.44
SEC16A-209ENST00000472305 UPF1Q92900 1129 aaKnown RBP eCLIP17.8■□□□□ 0.44
SEC16A-209ENST00000472305 TERF2IPQ9NYB0 399 aa17.8■□□□□ 0.44
SEC16A-209ENST00000472305 COL16A1Q07092 1604 aaPredicted RBP17.8■□□□□ 0.44
SEC16A-209ENST00000472305 SPATA31A3Q5VYP0 1347 aa17.79■□□□□ 0.44
SEC16A-209ENST00000472305 TTC21BQ7Z4L5 1316 aa17.79■□□□□ 0.44
SEC16A-209ENST00000472305 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
SEC16A-209ENST00000472305 PLEKHG5O94827 1062 aa17.78■□□□□ 0.44
SEC16A-209ENST00000472305 NUTM2GQ5VZR2 741 aa17.78■□□□□ 0.44
SEC16A-209ENST00000472305 LMOD2Q6P5Q4 547 aa17.78■□□□□ 0.44
SEC16A-209ENST00000472305 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.78■□□□□ 0.44
SEC16A-209ENST00000472305 LRRC59Q96AG4 307 aaKnown RBP17.78■□□□□ 0.44
SEC16A-209ENST00000472305 ZRANB1Q9UGI0 708 aa17.78■□□□□ 0.44
SEC16A-209ENST00000472305 TRPM3Q9HCF6 1732 aaPredicted RBP17.76■□□□□ 0.43
SEC16A-209ENST00000472305 NME9Q86XW9 330 aa17.76■□□□□ 0.43
SEC16A-209ENST00000472305 AKAP12Q02952 1782 aa17.76■□□□□ 0.43
SEC16A-209ENST00000472305 TNS3Q68CZ2 1445 aa17.75■□□□□ 0.43
SEC16A-209ENST00000472305 PNPLA6Q8IY17 1366 aa17.75■□□□□ 0.43
SEC16A-209ENST00000472305 NSD3Q9BZ95 1437 aa17.74■□□□□ 0.43
SEC16A-209ENST00000472305 ABTB2Q8N961 1025 aa17.74■□□□□ 0.43
SEC16A-209ENST00000472305 CABLES1Q8TDN4 633 aa17.74■□□□□ 0.43
SEC16A-209ENST00000472305 DDX10Q13206 875 aaKnown RBP17.73■□□□□ 0.43
SEC16A-209ENST00000472305 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
SEC16A-209ENST00000472305 MON2Q7Z3U7 1717 aa17.72■□□□□ 0.43
SEC16A-209ENST00000472305 JCADQ9P266 1359 aa17.72■□□□□ 0.43
SEC16A-209ENST00000472305 PER1O15534 1290 aaPredicted RBP17.72■□□□□ 0.43
SEC16A-209ENST00000472305 NRKQ7Z2Y5 1582 aa17.71■□□□□ 0.43
SEC16A-209ENST00000472305 BRD4O60885 1362 aaPredicted RBP17.71■□□□□ 0.43
SEC16A-209ENST00000472305 FYB1O15117 783 aa17.71■□□□□ 0.43
SEC16A-209ENST00000472305 TTC21AQ8NDW8 1320 aa17.71■□□□□ 0.42
SEC16A-209ENST00000472305 NLRP6P59044 892 aa17.7■□□□□ 0.42
SEC16A-209ENST00000472305 GGNBP2Q9H3C7 697 aa17.7■□□□□ 0.42
SEC16A-209ENST00000472305 ALS2Q96Q42 1657 aa17.7■□□□□ 0.42
SEC16A-209ENST00000472305 NUTM2BA6NNL0 878 aaPredicted RBP17.69■□□□□ 0.42
SEC16A-209ENST00000472305 NUTM2EB1AL46 878 aaPredicted RBP17.69■□□□□ 0.42
SEC16A-209ENST00000472305 NUTM2AQ8IVF1 878 aaPredicted RBP17.69■□□□□ 0.42
SEC16A-209ENST00000472305 ARHGEF10O15013 1369 aa17.68■□□□□ 0.42
SEC16A-209ENST00000472305 PIK3C2AO00443 1686 aa17.67■□□□□ 0.42
SEC16A-209ENST00000472305 CNGB1Q14028 1251 aaPredicted RBP17.67■□□□□ 0.42
SEC16A-209ENST00000472305 USP31Q70CQ4 1352 aa17.66■□□□□ 0.42
SEC16A-209ENST00000472305 FBLN1P23142 703 aa17.66■□□□□ 0.42
SEC16A-209ENST00000472305 AMER1Q5JTC6 1135 aaPredicted RBP17.66■□□□□ 0.42
SEC16A-209ENST00000472305 NLRP13Q86W25 1043 aa17.66■□□□□ 0.42
SEC16A-209ENST00000472305 KNSTRNQ9Y448 316 aa17.66■□□□□ 0.42
SEC16A-209ENST00000472305 SOX12O15370 315 aa17.65■□□□□ 0.42
SEC16A-209ENST00000472305 USP19O94966 1318 aa17.65■□□□□ 0.42
SEC16A-209ENST00000472305 CGNL1Q0VF96 1302 aa17.64■□□□□ 0.41
SEC16A-209ENST00000472305 LRP6O75581 1613 aa17.64■□□□□ 0.41
SEC16A-209ENST00000472305 COL22A1Q8NFW1 1626 aaPredicted RBP17.64■□□□□ 0.41
SEC16A-209ENST00000472305 SHPRHQ149N8 1683 aa17.64■□□□□ 0.41
SEC16A-209ENST00000472305 OVOS2A0A0J9YW53 1432 aa17.64■□□□□ 0.41
SEC16A-209ENST00000472305 OVOS2Q6IE36 1432 aa17.64■□□□□ 0.41
SEC16A-209ENST00000472305 ADAMTS2O95450 1211 aa17.63■□□□□ 0.41
SEC16A-209ENST00000472305 CC2D1BQ5T0F9 858 aaKnown RBP17.63■□□□□ 0.41
SEC16A-209ENST00000472305 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
SEC16A-209ENST00000472305 COG3Q96JB2 828 aa17.63■□□□□ 0.41
SEC16A-209ENST00000472305 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
SEC16A-209ENST00000472305 GCP02774 474 aa17.62■□□□□ 0.41
SEC16A-209ENST00000472305 ZC3H6P61129 1189 aaKnown RBP17.62■□□□□ 0.41
SEC16A-209ENST00000472305 MARF1Q9Y4F3 1742 aaKnown RBP17.61■□□□□ 0.41
SEC16A-209ENST00000472305 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
SEC16A-209ENST00000472305 CDK12Q9NYV4 1490 aaPredicted RBP17.6■□□□□ 0.41
SEC16A-209ENST00000472305 SLIT3O75094 1523 aa17.6■□□□□ 0.41
SEC16A-209ENST00000472305 CRYBG1Q9Y4K1 1723 aa17.59■□□□□ 0.41
SEC16A-209ENST00000472305 ZBTB7CA1YPR0 619 aa17.58■□□□□ 0.4
SEC16A-209ENST00000472305 TNNT2P45379 298 aaPredicted RBP17.58■□□□□ 0.4
SEC16A-209ENST00000472305 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
SEC16A-209ENST00000472305 FAM83GA6ND36 823 aa17.57■□□□□ 0.4
SEC16A-209ENST00000472305 CHRNA2Q15822 529 aa17.57■□□□□ 0.4
SEC16A-209ENST00000472305 MORC1Q86VD1 984 aa17.57■□□□□ 0.4
SEC16A-209ENST00000472305 PHRF1Q9P1Y6 1649 aaKnown RBP17.57■□□□□ 0.4
SEC16A-209ENST00000472305 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
SEC16A-209ENST00000472305 ABCA3Q99758 1704 aa17.56■□□□□ 0.4
SEC16A-209ENST00000472305 RXRBP28702 533 aa17.56■□□□□ 0.4
SEC16A-209ENST00000472305 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
SEC16A-209ENST00000472305 MEX3CQ5U5Q3 659 aaKnown RBP17.56■□□□□ 0.4
SEC16A-209ENST00000472305 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
SEC16A-209ENST00000472305 NSD2O96028 1365 aa17.55■□□□□ 0.4
SEC16A-209ENST00000472305 USP54Q70EL1 1684 aa17.55■□□□□ 0.4
SEC16A-209ENST00000472305 ARHGEF25Q86VW2 580 aa17.55■□□□□ 0.4
SEC16A-209ENST00000472305 C8orf37Q96NL8 207 aa17.55■□□□□ 0.4
SEC16A-209ENST00000472305 NFAT5O94916 1531 aa17.55■□□□□ 0.4
SEC16A-209ENST00000472305 NPC1L1Q9UHC9 1359 aa17.54■□□□□ 0.4
SEC16A-209ENST00000472305 PRDM11Q9NQV5 511 aa17.53■□□□□ 0.4
SEC16A-209ENST00000472305 MAP3K19Q56UN5 1328 aa17.52■□□□□ 0.4
SEC16A-209ENST00000472305 AXIN2Q9Y2T1 843 aa17.52■□□□□ 0.4
SEC16A-209ENST00000472305 EMILIN1Q9Y6C2 1016 aa17.52■□□□□ 0.4
SEC16A-209ENST00000472305 CPDO75976 1380 aa17.52■□□□□ 0.39
SEC16A-209ENST00000472305 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
SEC16A-209ENST00000472305 POLKQ9UBT6 870 aa17.51■□□□□ 0.39
SEC16A-209ENST00000472305 BTG4Q9NY30 223 aa17.49■□□□□ 0.39
SEC16A-209ENST00000472305 AFF2P51816 1311 aa17.48■□□□□ 0.39
SEC16A-209ENST00000472305 ANKRD26Q9UPS8 1709 aa17.48■□□□□ 0.39
SEC16A-209ENST00000472305 FNBP4Q8N3X1 1017 aaPredicted RBP17.48■□□□□ 0.39
SEC16A-209ENST00000472305 AATKQ6ZMQ8 1374 aa17.48■□□□□ 0.39
SEC16A-209ENST00000472305 PPM1GO15355 546 aaPredicted RBP17.47■□□□□ 0.39
SEC16A-209ENST00000472305 HOXC9P31274 260 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms