RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 NHSL1Q5SYE7 1610 aa23.04■■□□□ 1.28
CCM2-205ENST00000472223 ABTB2Q8N961 1025 aa23.03■■□□□ 1.28
CCM2-205ENST00000472223 LRRC59Q96AG4 307 aaKnown RBP23.03■■□□□ 1.28
CCM2-205ENST00000472223 CARD14Q9BXL6 1004 aa23.03■■□□□ 1.28
CCM2-205ENST00000472223 SBNO1A3KN83 1393 aa23.02■■□□□ 1.28
CCM2-205ENST00000472223 SOS2Q07890 1332 aaPredicted RBP23.02■■□□□ 1.28
CCM2-205ENST00000472223 PHLPP1O60346 1717 aa23.02■■□□□ 1.28
CCM2-205ENST00000472223 AHDC1Q5TGY3 1603 aaPredicted RBP23.01■■□□□ 1.27
CCM2-205ENST00000472223 ARHGEF10O15013 1369 aa22.99■■□□□ 1.27
CCM2-205ENST00000472223 PXDNQ92626 1479 aa22.98■■□□□ 1.27
CCM2-205ENST00000472223 NLRP13Q86W25 1043 aa22.98■■□□□ 1.27
CCM2-205ENST00000472223 FBXO41Q8TF61 875 aa22.98■■□□□ 1.27
CCM2-205ENST00000472223 PER1O15534 1290 aaPredicted RBP22.97■■□□□ 1.27
CCM2-205ENST00000472223 NLRP6P59044 892 aa22.97■■□□□ 1.27
CCM2-205ENST00000472223 COG3Q96JB2 828 aa22.97■■□□□ 1.27
CCM2-205ENST00000472223 SPATA31A3Q5VYP0 1347 aa22.97■■□□□ 1.27
CCM2-205ENST00000472223 NSD2O96028 1365 aa22.96■■□□□ 1.27
CCM2-205ENST00000472223 TNS3Q68CZ2 1445 aa22.96■■□□□ 1.27
CCM2-205ENST00000472223 SSH2Q76I76 1423 aa22.96■■□□□ 1.27
CCM2-205ENST00000472223 CNGB1Q14028 1251 aaPredicted RBP22.95■■□□□ 1.26
CCM2-205ENST00000472223 NRKQ7Z2Y5 1582 aa22.95■■□□□ 1.26
CCM2-205ENST00000472223 KIF20BQ96Q89 1820 aa22.94■■□□□ 1.26
CCM2-205ENST00000472223 TRPM3Q9HCF6 1732 aaPredicted RBP22.94■■□□□ 1.26
CCM2-205ENST00000472223 FYB1O15117 783 aa22.94■■□□□ 1.26
CCM2-205ENST00000472223 NME9Q86XW9 330 aa22.94■■□□□ 1.26
CCM2-205ENST00000472223 HAP1P54257 671 aaPredicted RBP22.93■■□□□ 1.26
CCM2-205ENST00000472223 CC2D1BQ5T0F9 858 aaKnown RBP22.93■■□□□ 1.26
CCM2-205ENST00000472223 GGNBP2Q9H3C7 697 aa22.93■■□□□ 1.26
CCM2-205ENST00000472223 NUTM2GQ5VZR2 741 aa22.92■■□□□ 1.26
CCM2-205ENST00000472223 MORC1Q86VD1 984 aa22.92■■□□□ 1.26
CCM2-205ENST00000472223 NPC1L1Q9UHC9 1359 aa22.91■■□□□ 1.26
CCM2-205ENST00000472223 AMER1Q5JTC6 1135 aaPredicted RBP22.91■■□□□ 1.26
CCM2-205ENST00000472223 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
CCM2-205ENST00000472223 ANP32CO43423 234 aa22.9■■□□□ 1.26
CCM2-205ENST00000472223 PLEKHG5O94827 1062 aa22.9■■□□□ 1.26
CCM2-205ENST00000472223 HSPA1LP34931 641 aa22.9■■□□□ 1.26
CCM2-205ENST00000472223 COL16A1Q07092 1604 aaPredicted RBP22.9■■□□□ 1.26
CCM2-205ENST00000472223 KCNH5Q8NCM2 988 aa22.89■■□□□ 1.25
CCM2-205ENST00000472223 ALS2Q96Q42 1657 aa22.89■■□□□ 1.25
CCM2-205ENST00000472223 USP31Q70CQ4 1352 aa22.89■■□□□ 1.25
CCM2-205ENST00000472223 PIK3C2AO00443 1686 aa22.87■■□□□ 1.25
CCM2-205ENST00000472223 JCADQ9P266 1359 aa22.87■■□□□ 1.25
CCM2-205ENST00000472223 ANKRD26Q9UPS8 1709 aa22.85■■□□□ 1.25
CCM2-205ENST00000472223 RALBP1Q15311 655 aa22.85■■□□□ 1.25
CCM2-205ENST00000472223 ZRANB1Q9UGI0 708 aa22.85■■□□□ 1.25
CCM2-205ENST00000472223 SOX12O15370 315 aa22.83■■□□□ 1.25
CCM2-205ENST00000472223 TNNT2P45379 298 aaPredicted RBP22.83■■□□□ 1.25
CCM2-205ENST00000472223 PNPLA6Q8IY17 1366 aa22.83■■□□□ 1.25
CCM2-205ENST00000472223 OVOS2A0A0J9YW53 1432 aa22.82■■□□□ 1.24
CCM2-205ENST00000472223 OVOS2Q6IE36 1432 aa22.82■■□□□ 1.24
CCM2-205ENST00000472223 GCP02774 474 aa22.81■■□□□ 1.24
CCM2-205ENST00000472223 CABLES1Q8TDN4 633 aa22.8■■□□□ 1.24
CCM2-205ENST00000472223 SHPRHQ149N8 1683 aa22.8■■□□□ 1.24
CCM2-205ENST00000472223 USP54Q70EL1 1684 aa22.8■■□□□ 1.24
CCM2-205ENST00000472223 USP19O94966 1318 aa22.8■■□□□ 1.24
CCM2-205ENST00000472223 SPATA31A6Q5VVP1 1343 aa22.79■■□□□ 1.24
CCM2-205ENST00000472223 COL22A1Q8NFW1 1626 aaPredicted RBP22.79■■□□□ 1.24
CCM2-205ENST00000472223 NUTM2BA6NNL0 878 aaPredicted RBP22.78■■□□□ 1.24
CCM2-205ENST00000472223 NUTM2EB1AL46 878 aaPredicted RBP22.78■■□□□ 1.24
CCM2-205ENST00000472223 MED1Q15648 1581 aaPredicted RBP22.78■■□□□ 1.24
CCM2-205ENST00000472223 NUTM2AQ8IVF1 878 aaPredicted RBP22.78■■□□□ 1.24
CCM2-205ENST00000472223 PRKRIP1Q9H875 184 aaPredicted RBP22.78■■□□□ 1.24
CCM2-205ENST00000472223 ZBTB7CA1YPR0 619 aa22.77■■□□□ 1.24
CCM2-205ENST00000472223 SLIT3O75094 1523 aa22.76■■□□□ 1.23
CCM2-205ENST00000472223 PARD3Q8TEW0 1356 aa22.76■■□□□ 1.23
CCM2-205ENST00000472223 PPM1GO15355 546 aaPredicted RBP22.75■■□□□ 1.23
CCM2-205ENST00000472223 AMPHP49418 695 aa22.75■■□□□ 1.23
CCM2-205ENST00000472223 ZC3H6P61129 1189 aaKnown RBP22.75■■□□□ 1.23
CCM2-205ENST00000472223 AATKQ6ZMQ8 1374 aa22.75■■□□□ 1.23
CCM2-205ENST00000472223 PHRF1Q9P1Y6 1649 aaKnown RBP22.75■■□□□ 1.23
CCM2-205ENST00000472223 MYBBP1AQ9BQG0 1328 aaKnown RBP22.73■■□□□ 1.23
CCM2-205ENST00000472223 MARF1Q9Y4F3 1742 aaKnown RBP22.73■■□□□ 1.23
CCM2-205ENST00000472223 MAP2P11137 1827 aaKnown RBP22.73■■□□□ 1.23
CCM2-205ENST00000472223 MEX3CQ5U5Q3 659 aaKnown RBP22.72■■□□□ 1.23
CCM2-205ENST00000472223 CFAP53Q96M91 514 aa22.72■■□□□ 1.23
CCM2-205ENST00000472223 PRDM11Q9NQV5 511 aa22.72■■□□□ 1.23
CCM2-205ENST00000472223 PPP2R1AP30153 589 aa22.71■■□□□ 1.23
CCM2-205ENST00000472223 RRS1Q15050 365 aaKnown RBP22.71■■□□□ 1.23
CCM2-205ENST00000472223 ADAMTS2O95450 1211 aa22.7■■□□□ 1.22
CCM2-205ENST00000472223 ABCA3Q99758 1704 aa22.69■■□□□ 1.22
CCM2-205ENST00000472223 CRYBG1Q9Y4K1 1723 aa22.69■■□□□ 1.22
CCM2-205ENST00000472223 ARHGEF25Q86VW2 580 aa22.69■■□□□ 1.22
CCM2-205ENST00000472223 CPDO75976 1380 aa22.68■■□□□ 1.22
CCM2-205ENST00000472223 KIF24Q5T7B8 1368 aa22.68■■□□□ 1.22
CCM2-205ENST00000472223 KIAA0232Q92628 1395 aa22.68■■□□□ 1.22
CCM2-205ENST00000472223 MAP3K19Q56UN5 1328 aa22.68■■□□□ 1.22
CCM2-205ENST00000472223 FBLN1P23142 703 aa22.68■■□□□ 1.22
CCM2-205ENST00000472223 MTHFSP49914 203 aa22.68■■□□□ 1.22
CCM2-205ENST00000472223 POLKQ9UBT6 870 aa22.68■■□□□ 1.22
CCM2-205ENST00000472223 LTN1O94822 1766 aa22.68■■□□□ 1.22
CCM2-205ENST00000472223 NFAT5O94916 1531 aa22.67■■□□□ 1.22
CCM2-205ENST00000472223 EMILIN1Q9Y6C2 1016 aa22.66■■□□□ 1.22
CCM2-205ENST00000472223 RTL1A6NKG5 1358 aa22.65■■□□□ 1.22
CCM2-205ENST00000472223 IP6K1Q92551 441 aa22.65■■□□□ 1.22
CCM2-205ENST00000472223 FLT4P35916 1363 aa22.64■■□□□ 1.22
CCM2-205ENST00000472223 CHRNA2Q15822 529 aa22.64■■□□□ 1.21
CCM2-205ENST00000472223 NGLY1Q96IV0 654 aa22.64■■□□□ 1.21
CCM2-205ENST00000472223 EVA1CP58658 441 aa22.63■■□□□ 1.21
CCM2-205ENST00000472223 FAM83GA6ND36 823 aa22.62■■□□□ 1.21
CCM2-205ENST00000472223 HOXC9P31274 260 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms