RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 ATP7BP35670 1465 aa26.73■■□□□ 1.87
SNX21-209ENST00000472219 IL16Q14005 1332 aa26.72■■□□□ 1.87
SNX21-209ENST00000472219 TSPOAP1O95153 1857 aa26.72■■□□□ 1.87
SNX21-209ENST00000472219 PLEKHF1Q96S99 279 aa26.72■■□□□ 1.87
SNX21-209ENST00000472219 USP35Q9P2H5 1018 aa26.72■■□□□ 1.87
SNX21-209ENST00000472219 RIMS2Q9UQ26 1411 aa26.72■■□□□ 1.87
SNX21-209ENST00000472219 DAXXQ9UER7 740 aaPredicted RBP26.71■■□□□ 1.87
SNX21-209ENST00000472219 IGHDP01880 384 aa26.7■■□□□ 1.87
SNX21-209ENST00000472219 PNPLA6Q8IY17 1366 aa26.7■■□□□ 1.86
SNX21-209ENST00000472219 DIAPH1O60610 1272 aaKnown RBP26.7■■□□□ 1.86
SNX21-209ENST00000472219 TMPOP42166 694 aaKnown RBP26.7■■□□□ 1.86
SNX21-209ENST00000472219 VIRMAQ69YN4 1812 aaKnown RBP26.69■■□□□ 1.86
SNX21-209ENST00000472219 ZMYM3Q14202 1370 aa26.69■■□□□ 1.86
SNX21-209ENST00000472219 DEKP35659 375 aaKnown RBP26.68■■□□□ 1.86
SNX21-209ENST00000472219 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.68■■□□□ 1.86
SNX21-209ENST00000472219 ZKSCAN2Q63HK3 967 aa26.67■■□□□ 1.86
SNX21-209ENST00000472219 SENP3Q9H4L4 574 aaPredicted RBP26.67■■□□□ 1.86
SNX21-209ENST00000472219 CABP1Q9NZU7 370 aa26.67■■□□□ 1.86
SNX21-209ENST00000472219 SETD1AO15047 1707 aaKnown RBP26.67■■□□□ 1.86
SNX21-209ENST00000472219 CDC42BPGQ6DT37 1551 aa26.67■■□□□ 1.86
SNX21-209ENST00000472219 RWDD1Q9H446 243 aaPredicted RBP26.64■■□□□ 1.85
SNX21-209ENST00000472219 NEFMP07197 916 aa26.63■■□□□ 1.85
SNX21-209ENST00000472219 FTSJ3Q8IY81 847 aaKnown RBP26.63■■□□□ 1.85
SNX21-209ENST00000472219 FCHSD2O94868 740 aa26.62■■□□□ 1.85
SNX21-209ENST00000472219 HDGFP51858 240 aaKnown RBP26.62■■□□□ 1.85
SNX21-209ENST00000472219 MVPQ14764 893 aaKnown RBP26.62■■□□□ 1.85
SNX21-209ENST00000472219 BCL2L13Q9BXK5 485 aa26.61■■□□□ 1.85
SNX21-209ENST00000472219 TRIM35Q9UPQ4 493 aa26.61■■□□□ 1.85
SNX21-209ENST00000472219 RLBP1P12271 317 aa26.6■■□□□ 1.85
SNX21-209ENST00000472219 DZIP1LQ8IYY4 767 aaKnown RBP26.6■■□□□ 1.85
SNX21-209ENST00000472219 ESF1Q9H501 851 aaKnown RBP26.59■■□□□ 1.85
SNX21-209ENST00000472219 RIPK4P57078 832 aa26.59■■□□□ 1.85
SNX21-209ENST00000472219 SMC4Q9NTJ3 1288 aa26.58■■□□□ 1.85
SNX21-209ENST00000472219 EDC4Q6P2E9 1401 aaKnown RBP26.58■■□□□ 1.84
SNX21-209ENST00000472219 EXOSC9Q06265 439 aaKnown RBP26.57■■□□□ 1.84
SNX21-209ENST00000472219 LAS1LQ9Y4W2 734 aaKnown RBP26.57■■□□□ 1.84
SNX21-209ENST00000472219 TSR2Q969E8 191 aaKnown RBP26.57■■□□□ 1.84
SNX21-209ENST00000472219 KNDC1Q76NI1 1749 aa26.56■■□□□ 1.84
SNX21-209ENST00000472219 SIRT1Q96EB6 747 aa26.56■■□□□ 1.84
SNX21-209ENST00000472219 PCDHB15Q9Y5E8 787 aa26.55■■□□□ 1.84
SNX21-209ENST00000472219 FAM135BQ49AJ0 1406 aa26.55■■□□□ 1.84
SNX21-209ENST00000472219 NRXN3Q9Y4C0 1643 aa26.55■■□□□ 1.84
SNX21-209ENST00000472219 WAPLQ7Z5K2 1190 aa26.55■■□□□ 1.84
SNX21-209ENST00000472219 WASLO00401 505 aaPredicted RBP26.54■■□□□ 1.84
SNX21-209ENST00000472219 KIF16BQ96L93 1317 aa26.54■■□□□ 1.84
SNX21-209ENST00000472219 CPSF1Q10570 1443 aaKnown RBP26.54■■□□□ 1.84
SNX21-209ENST00000472219 CALD1Q05682 793 aaKnown RBP26.53■■□□□ 1.84
SNX21-209ENST00000472219 ZNF428Q96B54 188 aa26.53■■□□□ 1.84
SNX21-209ENST00000472219 DDX19BQ9UMR2 479 aa26.53■■□□□ 1.84
SNX21-209ENST00000472219 LRRC7Q96NW7 1537 aa26.53■■□□□ 1.84
SNX21-209ENST00000472219 IPO8O15397 1037 aaKnown RBP26.53■■□□□ 1.84
SNX21-209ENST00000472219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.53■■□□□ 1.84
SNX21-209ENST00000472219 PPIP5K1Q6PFW1 1433 aa26.52■■□□□ 1.84
SNX21-209ENST00000472219 MLECQ14165 292 aa26.52■■□□□ 1.84
SNX21-209ENST00000472219 TECPR2O15040 1411 aa26.52■■□□□ 1.84
SNX21-209ENST00000472219 POLKQ9UBT6 870 aa26.51■■□□□ 1.83
SNX21-209ENST00000472219 TNNQ9UQP3 1299 aa26.51■■□□□ 1.83
SNX21-209ENST00000472219 ATF7IPQ6VMQ6 1270 aa26.51■■□□□ 1.83
SNX21-209ENST00000472219 ALDH1L2Q3SY69 923 aa26.5■■□□□ 1.83
SNX21-209ENST00000472219 SSH1Q8WYL5 1049 aa26.5■■□□□ 1.83
SNX21-209ENST00000472219 CDK12Q9NYV4 1490 aaPredicted RBP26.5■■□□□ 1.83
SNX21-209ENST00000472219 AATKQ6ZMQ8 1374 aa26.5■■□□□ 1.83
SNX21-209ENST00000472219 RSPH6AQ9H0K4 717 aa26.49■■□□□ 1.83
SNX21-209ENST00000472219 MAP2P11137 1827 aaKnown RBP26.49■■□□□ 1.83
SNX21-209ENST00000472219 TRIM27P14373 513 aa26.48■■□□□ 1.83
SNX21-209ENST00000472219 BCL11AQ9H165 835 aa26.48■■□□□ 1.83
SNX21-209ENST00000472219 UPF2Q9HAU5 1272 aaKnown RBP26.48■■□□□ 1.83
SNX21-209ENST00000472219 PDZRN3Q9UPQ7 1066 aa26.48■■□□□ 1.83
SNX21-209ENST00000472219 CPS1P31327 1500 aa26.48■■□□□ 1.83
SNX21-209ENST00000472219 PRKAR2BP31323 418 aa26.47■■□□□ 1.83
SNX21-209ENST00000472219 METP08581 1390 aa26.46■■□□□ 1.83
SNX21-209ENST00000472219 HDAC1Q13547 482 aaPredicted RBP26.46■■□□□ 1.83
SNX21-209ENST00000472219 MON2Q7Z3U7 1717 aa26.45■■□□□ 1.83
SNX21-209ENST00000472219 NFE2L2Q16236 605 aa26.45■■□□□ 1.82
SNX21-209ENST00000472219 ITPRIPQ8IWB1 547 aa26.45■■□□□ 1.82
SNX21-209ENST00000472219 CCDC61Q9Y6R9 512 aa26.45■■□□□ 1.82
SNX21-209ENST00000472219 TNRQ92752 1358 aa26.44■■□□□ 1.82
SNX21-209ENST00000472219 BRPF1P55201 1214 aaPredicted RBP26.43■■□□□ 1.82
SNX21-209ENST00000472219 BECN1Q14457 450 aa26.43■■□□□ 1.82
SNX21-209ENST00000472219 NUDT16Q96DE0 195 aaKnown RBP26.43■■□□□ 1.82
SNX21-209ENST00000472219 COG3Q96JB2 828 aa26.43■■□□□ 1.82
SNX21-209ENST00000472219 NOB1Q9ULX3 412 aaKnown RBP26.43■■□□□ 1.82
SNX21-209ENST00000472219 ZNF692Q9BU19 519 aaPredicted RBP26.42■■□□□ 1.82
SNX21-209ENST00000472219 CHMP4BQ9H444 224 aaKnown RBP26.42■■□□□ 1.82
SNX21-209ENST00000472219 ITSN1Q15811 1721 aa26.42■■□□□ 1.82
SNX21-209ENST00000472219 KIF13AQ9H1H9 1805 aa26.42■■□□□ 1.82
SNX21-209ENST00000472219 LMOD3Q0VAK6 560 aa26.42■■□□□ 1.82
SNX21-209ENST00000472219 AKAP12Q02952 1782 aa26.41■■□□□ 1.82
SNX21-209ENST00000472219 TXNDC2Q86VQ3 553 aa26.4■■□□□ 1.82
SNX21-209ENST00000472219 USP19O94966 1318 aa26.4■■□□□ 1.82
SNX21-209ENST00000472219 IL13P35225 146 aa26.38■■□□□ 1.81
SNX21-209ENST00000472219 SLC4A3P48751 1232 aa26.38■■□□□ 1.81
SNX21-209ENST00000472219 GNAI1P63096 354 aa26.38■■□□□ 1.81
SNX21-209ENST00000472219 TMEM2Q9UHN6 1383 aa26.38■■□□□ 1.81
SNX21-209ENST00000472219 NME9Q86XW9 330 aa26.38■■□□□ 1.81
SNX21-209ENST00000472219 IFT57Q9NWB7 429 aa26.38■■□□□ 1.81
SNX21-209ENST00000472219 C3P01024 1663 aa26.37■■□□□ 1.81
SNX21-209ENST00000472219 UBR1Q8IWV7 1749 aa26.37■■□□□ 1.81
SNX21-209ENST00000472219 EMILIN1Q9Y6C2 1016 aa26.36■■□□□ 1.81
SNX21-209ENST00000472219 NFKBIBQ15653 356 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms