RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 PLEKHG1Q9ULL1 1385 aa22.61■■□□□ 1.21
RRP1-202ENST00000471909 CCDC27Q2M243 656 aa22.6■■□□□ 1.21
RRP1-202ENST00000471909 NUDT16Q96DE0 195 aaKnown RBP22.6■■□□□ 1.21
RRP1-202ENST00000471909 ROBO2Q9HCK4 1378 aa22.6■■□□□ 1.21
RRP1-202ENST00000471909 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.6■■□□□ 1.21
RRP1-202ENST00000471909 KIF20BQ96Q89 1820 aa22.6■■□□□ 1.21
RRP1-202ENST00000471909 U2SURPO15042 1029 aaKnown RBP22.59■■□□□ 1.21
RRP1-202ENST00000471909 WDR63Q8IWG1 891 aa22.59■■□□□ 1.21
RRP1-202ENST00000471909 NCKAP5LQ9HCH0 1330 aa22.58■■□□□ 1.21
RRP1-202ENST00000471909 PNPLA6Q8IY17 1366 aa22.58■■□□□ 1.21
RRP1-202ENST00000471909 BCAR3O75815 825 aa22.58■■□□□ 1.21
RRP1-202ENST00000471909 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
RRP1-202ENST00000471909 NCBP3Q53F19 620 aaKnown RBP22.58■■□□□ 1.2
RRP1-202ENST00000471909 C3P01024 1663 aa22.57■■□□□ 1.2
RRP1-202ENST00000471909 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
RRP1-202ENST00000471909 PLEKHF1Q96S99 279 aa22.57■■□□□ 1.2
RRP1-202ENST00000471909 CCDC61Q9Y6R9 512 aa22.57■■□□□ 1.2
RRP1-202ENST00000471909 EDC4Q6P2E9 1401 aaKnown RBP22.56■■□□□ 1.2
RRP1-202ENST00000471909 TCERG1O14776 1098 aaKnown RBP22.56■■□□□ 1.2
RRP1-202ENST00000471909 ADGRB2O60241 1585 aa22.56■■□□□ 1.2
RRP1-202ENST00000471909 FBLN1P23142 703 aa22.55■■□□□ 1.2
RRP1-202ENST00000471909 SLC26A8Q96RN1 970 aa22.55■■□□□ 1.2
RRP1-202ENST00000471909 EID1Q9Y6B2 187 aa22.55■■□□□ 1.2
RRP1-202ENST00000471909 DIAPH1O60610 1272 aaKnown RBP22.54■■□□□ 1.2
RRP1-202ENST00000471909 POLKQ9UBT6 870 aa22.54■■□□□ 1.2
RRP1-202ENST00000471909 PRR36Q9H6K5 1346 aa22.54■■□□□ 1.2
RRP1-202ENST00000471909 NPM2Q86SE8 214 aaKnown RBP22.53■■□□□ 1.2
RRP1-202ENST00000471909 CDC42BPGQ6DT37 1551 aa22.53■■□□□ 1.2
RRP1-202ENST00000471909 NME9Q86XW9 330 aa22.53■■□□□ 1.2
RRP1-202ENST00000471909 SLIT1O75093 1534 aa22.52■■□□□ 1.2
RRP1-202ENST00000471909 ARHGAP23Q9P227 1491 aa22.52■■□□□ 1.2
RRP1-202ENST00000471909 FER1L4A9Z1Z3 1794 aa22.52■■□□□ 1.2
RRP1-202ENST00000471909 PTPRUQ92729 1446 aa22.51■■□□□ 1.19
RRP1-202ENST00000471909 ZRANB1Q9UGI0 708 aa22.5■■□□□ 1.19
RRP1-202ENST00000471909 TMPOP42166 694 aaKnown RBP22.5■■□□□ 1.19
RRP1-202ENST00000471909 PPM1GO15355 546 aaPredicted RBP22.49■■□□□ 1.19
RRP1-202ENST00000471909 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.49■■□□□ 1.19
RRP1-202ENST00000471909 PDE4AP27815 886 aa22.49■■□□□ 1.19
RRP1-202ENST00000471909 MAPK8IP3Q9UPT6 1336 aa22.48■■□□□ 1.19
RRP1-202ENST00000471909 THEMISQ8N1K5 641 aaPredicted RBP22.47■■□□□ 1.19
RRP1-202ENST00000471909 TRIM35Q9UPQ4 493 aa22.47■■□□□ 1.19
RRP1-202ENST00000471909 MS4A1P11836 297 aa22.47■■□□□ 1.19
RRP1-202ENST00000471909 ZNF692Q9BU19 519 aaPredicted RBP22.47■■□□□ 1.19
RRP1-202ENST00000471909 MYH16Q9H6N6 1097 aa22.47■■□□□ 1.19
RRP1-202ENST00000471909 MON2Q7Z3U7 1717 aa22.46■■□□□ 1.19
RRP1-202ENST00000471909 RARSP54136 660 aaKnown RBP22.46■■□□□ 1.19
RRP1-202ENST00000471909 TBX22Q9Y458 520 aa22.46■■□□□ 1.19
RRP1-202ENST00000471909 EMILIN1Q9Y6C2 1016 aa22.46■■□□□ 1.19
RRP1-202ENST00000471909 AMOTL2Q9Y2J4 779 aa22.46■■□□□ 1.19
RRP1-202ENST00000471909 KDM2BQ8NHM5 1336 aa22.45■■□□□ 1.18
RRP1-202ENST00000471909 BACH2Q9BYV9 841 aa22.45■■□□□ 1.18
RRP1-202ENST00000471909 FCHSD2O94868 740 aa22.44■■□□□ 1.18
RRP1-202ENST00000471909 COG3Q96JB2 828 aa22.44■■□□□ 1.18
RRP1-202ENST00000471909 AATKQ6ZMQ8 1374 aa22.44■■□□□ 1.18
RRP1-202ENST00000471909 PDE3AQ14432 1141 aa22.43■■□□□ 1.18
RRP1-202ENST00000471909 PNNQ9H307 717 aaKnown RBP22.43■■□□□ 1.18
RRP1-202ENST00000471909 AKAP12Q02952 1782 aa22.43■■□□□ 1.18
RRP1-202ENST00000471909 NUTM2FA1L443 756 aa22.43■■□□□ 1.18
RRP1-202ENST00000471909 MAP2P11137 1827 aaKnown RBP22.42■■□□□ 1.18
RRP1-202ENST00000471909 RIPK4P57078 832 aa22.41■■□□□ 1.18
RRP1-202ENST00000471909 RSPH6AQ9H0K4 717 aa22.41■■□□□ 1.18
RRP1-202ENST00000471909 PLEKHG3A1L390 1219 aa22.41■■□□□ 1.18
RRP1-202ENST00000471909 ACEP12821 1306 aa22.4■■□□□ 1.18
RRP1-202ENST00000471909 ITSN1Q15811 1721 aa22.4■■□□□ 1.18
RRP1-202ENST00000471909 LRRC7Q96NW7 1537 aa22.4■■□□□ 1.18
RRP1-202ENST00000471909 USP35Q9P2H5 1018 aa22.4■■□□□ 1.18
RRP1-202ENST00000471909 CANXP27824 592 aaKnown RBP22.4■■□□□ 1.18
RRP1-202ENST00000471909 TSR2Q969E8 191 aaKnown RBP22.4■■□□□ 1.18
RRP1-202ENST00000471909 CDK12Q9NYV4 1490 aaPredicted RBP22.4■■□□□ 1.18
RRP1-202ENST00000471909 PRKAR2BP31323 418 aa22.39■■□□□ 1.18
RRP1-202ENST00000471909 IL13P35225 146 aa22.39■■□□□ 1.18
RRP1-202ENST00000471909 CENPQQ7L2Z9 268 aaPredicted RBP22.39■■□□□ 1.18
RRP1-202ENST00000471909 SKAP1Q86WV1 359 aa22.39■■□□□ 1.18
RRP1-202ENST00000471909 FRAT1Q92837 279 aaPredicted RBP22.39■■□□□ 1.18
RRP1-202ENST00000471909 LAS1LQ9Y4W2 734 aaKnown RBP22.39■■□□□ 1.18
RRP1-202ENST00000471909 NEFMP07197 916 aa22.39■■□□□ 1.17
RRP1-202ENST00000471909 RRS1Q15050 365 aaKnown RBP22.39■■□□□ 1.17
RRP1-202ENST00000471909 PTCH1Q13635 1447 aa22.39■■□□□ 1.17
RRP1-202ENST00000471909 TOPAZ1Q8N9V7 1692 aa22.39■■□□□ 1.17
RRP1-202ENST00000471909 PANK1Q8TE04 598 aa22.38■■□□□ 1.17
RRP1-202ENST00000471909 TTC21BQ7Z4L5 1316 aa22.38■■□□□ 1.17
RRP1-202ENST00000471909 BCL2L13Q9BXK5 485 aa22.38■■□□□ 1.17
RRP1-202ENST00000471909 IL16Q14005 1332 aa22.37■■□□□ 1.17
RRP1-202ENST00000471909 HMOX1P09601 288 aa22.36■■□□□ 1.17
RRP1-202ENST00000471909 COG6Q9Y2V7 657 aa22.36■■□□□ 1.17
RRP1-202ENST00000471909 DIP2AQ14689 1571 aa22.36■■□□□ 1.17
RRP1-202ENST00000471909 USP6P35125 1406 aa22.35■■□□□ 1.17
RRP1-202ENST00000471909 PHACTR3Q96KR7 559 aa22.35■■□□□ 1.17
RRP1-202ENST00000471909 NRKQ7Z2Y5 1582 aa22.35■■□□□ 1.17
RRP1-202ENST00000471909 CT47B1P0C2W7 299 aaPredicted RBP22.34■■□□□ 1.17
RRP1-202ENST00000471909 EXOSC9Q06265 439 aaKnown RBP22.34■■□□□ 1.17
RRP1-202ENST00000471909 TNNQ9UQP3 1299 aa22.33■■□□□ 1.17
RRP1-202ENST00000471909 CEP170BQ9Y4F5 1589 aaPredicted RBP22.33■■□□□ 1.16
RRP1-202ENST00000471909 RLBP1P12271 317 aa22.32■■□□□ 1.16
RRP1-202ENST00000471909 OVOS2A0A0J9YW53 1432 aa22.31■■□□□ 1.16
RRP1-202ENST00000471909 OVOS2Q6IE36 1432 aa22.31■■□□□ 1.16
RRP1-202ENST00000471909 NFE2L2Q16236 605 aa22.31■■□□□ 1.16
RRP1-202ENST00000471909 SSH2Q76I76 1423 aa22.31■■□□□ 1.16
RRP1-202ENST00000471909 CLUAP1Q96AJ1 413 aa22.3■■□□□ 1.16
RRP1-202ENST00000471909 DDRGK1Q96HY6 314 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms