RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
LINC00888-202ENST00000471496 ITSN1Q15811 1721 aa17.66■□□□□ 0.42
LINC00888-202ENST00000471496 FOXO3O43524 673 aa17.65■□□□□ 0.42
LINC00888-202ENST00000471496 CDK19Q9BWU1 502 aa17.64■□□□□ 0.41
LINC00888-202ENST00000471496 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
LINC00888-202ENST00000471496 EIF3AQ14152 1382 aaKnown RBP17.64■□□□□ 0.41
LINC00888-202ENST00000471496 NPHP3Q7Z494 1330 aa17.63■□□□□ 0.41
LINC00888-202ENST00000471496 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
LINC00888-202ENST00000471496 LRRC59Q96AG4 307 aaKnown RBP17.63■□□□□ 0.41
LINC00888-202ENST00000471496 CREBZFQ9NS37 354 aa17.63■□□□□ 0.41
LINC00888-202ENST00000471496 LRP6O75581 1613 aa17.62■□□□□ 0.41
LINC00888-202ENST00000471496 PNPLA6Q8IY17 1366 aa17.62■□□□□ 0.41
LINC00888-202ENST00000471496 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
LINC00888-202ENST00000471496 TRPM3Q9HCF6 1732 aaPredicted RBP17.61■□□□□ 0.41
LINC00888-202ENST00000471496 XPCQ01831 940 aaPredicted RBP17.61■□□□□ 0.41
LINC00888-202ENST00000471496 NUDT16Q96DE0 195 aaKnown RBP17.61■□□□□ 0.41
LINC00888-202ENST00000471496 SBNO2Q9Y2G9 1366 aa17.6■□□□□ 0.41
LINC00888-202ENST00000471496 PMFBP1Q8TBY8 1022 aa17.6■□□□□ 0.41
LINC00888-202ENST00000471496 DISP3Q9P2K9 1392 aa17.59■□□□□ 0.41
LINC00888-202ENST00000471496 SPATA31A6Q5VVP1 1343 aa17.59■□□□□ 0.41
LINC00888-202ENST00000471496 FKBP8Q14318 412 aa17.57■□□□□ 0.4
LINC00888-202ENST00000471496 KRT28Q7Z3Y7 464 aa17.57■□□□□ 0.4
LINC00888-202ENST00000471496 EVX2Q03828 476 aa17.56■□□□□ 0.4
LINC00888-202ENST00000471496 CABP2Q9NPB3 220 aa17.56■□□□□ 0.4
LINC00888-202ENST00000471496 SPATA31A3Q5VYP0 1347 aa17.56■□□□□ 0.4
LINC00888-202ENST00000471496 CCDC61Q9Y6R9 512 aa17.56■□□□□ 0.4
LINC00888-202ENST00000471496 ALS2Q96Q42 1657 aa17.55■□□□□ 0.4
LINC00888-202ENST00000471496 SRPK2P78362 688 aaKnown RBP17.55■□□□□ 0.4
LINC00888-202ENST00000471496 POLR3AO14802 1390 aaPredicted RBP17.55■□□□□ 0.4
LINC00888-202ENST00000471496 EVC2Q86UK5 1308 aa17.54■□□□□ 0.4
LINC00888-202ENST00000471496 PLEKHG3A1L390 1219 aa17.54■□□□□ 0.4
LINC00888-202ENST00000471496 TESK2Q96S53 571 aa17.54■□□□□ 0.4
LINC00888-202ENST00000471496 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
LINC00888-202ENST00000471496 TNS3Q68CZ2 1445 aa17.53■□□□□ 0.4
LINC00888-202ENST00000471496 ST20-MTHFSA0A0A6YYL1 179 aa17.53■□□□□ 0.4
LINC00888-202ENST00000471496 PSME1Q06323 249 aa17.53■□□□□ 0.4
LINC00888-202ENST00000471496 RGS17Q9UGC6 210 aaPredicted RBP17.53■□□□□ 0.4
LINC00888-202ENST00000471496 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
LINC00888-202ENST00000471496 USP47Q96K76 1375 aa17.52■□□□□ 0.4
LINC00888-202ENST00000471496 ABCA3Q99758 1704 aa17.52■□□□□ 0.4
LINC00888-202ENST00000471496 MARF1Q9Y4F3 1742 aaKnown RBP17.52■□□□□ 0.4
LINC00888-202ENST00000471496 ACEP12821 1306 aa17.51■□□□□ 0.39
LINC00888-202ENST00000471496 NUTM2BA6NNL0 878 aaPredicted RBP17.5■□□□□ 0.39
LINC00888-202ENST00000471496 NUTM2EB1AL46 878 aaPredicted RBP17.5■□□□□ 0.39
LINC00888-202ENST00000471496 NUTM2AQ8IVF1 878 aaPredicted RBP17.5■□□□□ 0.39
LINC00888-202ENST00000471496 NGDNQ8NEJ9 315 aaKnown RBP17.5■□□□□ 0.39
LINC00888-202ENST00000471496 CRYBG1Q9Y4K1 1723 aa17.5■□□□□ 0.39
LINC00888-202ENST00000471496 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
LINC00888-202ENST00000471496 CABP1Q9NZU7 370 aa17.49■□□□□ 0.39
LINC00888-202ENST00000471496 CD44P16070 742 aaKnown RBP17.48■□□□□ 0.39
LINC00888-202ENST00000471496 ATAD2Q6PL18 1390 aa17.47■□□□□ 0.39
LINC00888-202ENST00000471496 ILDR2Q71H61 639 aa17.46■□□□□ 0.39
LINC00888-202ENST00000471496 ARHGEF10O15013 1369 aa17.46■□□□□ 0.39
LINC00888-202ENST00000471496 CD163L1Q9NR16 1453 aa17.45■□□□□ 0.38
LINC00888-202ENST00000471496 NRKQ7Z2Y5 1582 aa17.45■□□□□ 0.38
LINC00888-202ENST00000471496 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
LINC00888-202ENST00000471496 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
LINC00888-202ENST00000471496 USP6P35125 1406 aa17.44■□□□□ 0.38
LINC00888-202ENST00000471496 CPSF1Q10570 1443 aaKnown RBP17.44■□□□□ 0.38
LINC00888-202ENST00000471496 SSH2Q76I76 1423 aa17.44■□□□□ 0.38
LINC00888-202ENST00000471496 ADAMTS2O95450 1211 aa17.44■□□□□ 0.38
LINC00888-202ENST00000471496 MEX3CQ5U5Q3 659 aaKnown RBP17.44■□□□□ 0.38
LINC00888-202ENST00000471496 CABLES1Q8TDN4 633 aa17.44■□□□□ 0.38
LINC00888-202ENST00000471496 POTEAQ6S8J7 498 aa17.43■□□□□ 0.38
LINC00888-202ENST00000471496 PHRF1Q9P1Y6 1649 aaKnown RBP17.42■□□□□ 0.38
LINC00888-202ENST00000471496 LMOD2Q6P5Q4 547 aa17.42■□□□□ 0.38
LINC00888-202ENST00000471496 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
LINC00888-202ENST00000471496 PLEKHG5O94827 1062 aa17.41■□□□□ 0.38
LINC00888-202ENST00000471496 C8orf37Q96NL8 207 aa17.41■□□□□ 0.38
LINC00888-202ENST00000471496 PIK3C2AO00443 1686 aa17.4■□□□□ 0.38
LINC00888-202ENST00000471496 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
LINC00888-202ENST00000471496 AFF2P51816 1311 aa17.4■□□□□ 0.38
LINC00888-202ENST00000471496 SLC24A1O60721 1099 aa17.39■□□□□ 0.37
LINC00888-202ENST00000471496 CLCN6P51797 869 aa17.39■□□□□ 0.37
LINC00888-202ENST00000471496 SLC12A5Q9H2X9 1139 aa17.39■□□□□ 0.37
LINC00888-202ENST00000471496 MYOM1P52179 1685 aa17.38■□□□□ 0.37
LINC00888-202ENST00000471496 PLCH1Q4KWH8 1693 aa17.38■□□□□ 0.37
LINC00888-202ENST00000471496 TMF1P82094 1093 aa17.37■□□□□ 0.37
LINC00888-202ENST00000471496 FNBP4Q8N3X1 1017 aaPredicted RBP17.37■□□□□ 0.37
LINC00888-202ENST00000471496 HSPA5P11021 654 aaKnown RBP17.37■□□□□ 0.37
LINC00888-202ENST00000471496 NGLY1Q96IV0 654 aa17.37■□□□□ 0.37
LINC00888-202ENST00000471496 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.37■□□□□ 0.37
LINC00888-202ENST00000471496 SLIT2O94813 1529 aa17.36■□□□□ 0.37
LINC00888-202ENST00000471496 BCL9LQ86UU0 1499 aa17.36■□□□□ 0.37
LINC00888-202ENST00000471496 MNX1P50219 401 aaPredicted RBP17.36■□□□□ 0.37
LINC00888-202ENST00000471496 NUTM2GQ5VZR2 741 aa17.36■□□□□ 0.37
LINC00888-202ENST00000471496 ZNF772Q68DY9 489 aaPredicted RBP17.36■□□□□ 0.37
LINC00888-202ENST00000471496 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
LINC00888-202ENST00000471496 KTN1Q86UP2 1357 aaKnown RBP17.35■□□□□ 0.37
LINC00888-202ENST00000471496 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
LINC00888-202ENST00000471496 USP19O94966 1318 aa17.35■□□□□ 0.37
LINC00888-202ENST00000471496 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC00888-202ENST00000471496 TMC1Q8TDI8 760 aa17.35■□□□□ 0.37
LINC00888-202ENST00000471496 A0A1W2PP64 1363 aa17.35■□□□□ 0.37
LINC00888-202ENST00000471496 NINLQ9Y2I6 1382 aa17.35■□□□□ 0.37
LINC00888-202ENST00000471496 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
LINC00888-202ENST00000471496 USP54Q70EL1 1684 aa17.34■□□□□ 0.37
LINC00888-202ENST00000471496 SLIT3O75094 1523 aa17.33■□□□□ 0.36
LINC00888-202ENST00000471496 COL14A1Q05707 1796 aaKnown RBP17.33■□□□□ 0.36
LINC00888-202ENST00000471496 NRAPQ86VF7 1730 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms