RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 AKAP12Q02952 1782 aa17.47■□□□□ 0.39
SND1-209ENST00000470723 PHLPP1O60346 1717 aa17.47■□□□□ 0.39
SND1-209ENST00000470723 COL16A1Q07092 1604 aaPredicted RBP17.47■□□□□ 0.39
SND1-209ENST00000470723 TTC21BQ7Z4L5 1316 aa17.47■□□□□ 0.39
SND1-209ENST00000470723 PANK3Q9H999 370 aa17.46■□□□□ 0.39
SND1-209ENST00000470723 TRPM3Q9HCF6 1732 aaPredicted RBP17.45■□□□□ 0.38
SND1-209ENST00000470723 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
SND1-209ENST00000470723 PER1O15534 1290 aaPredicted RBP17.45■□□□□ 0.38
SND1-209ENST00000470723 MYOM1P52179 1685 aa17.45■□□□□ 0.38
SND1-209ENST00000470723 TTC21AQ8NDW8 1320 aa17.45■□□□□ 0.38
SND1-209ENST00000470723 POLR3GLQ9BT43 218 aa17.44■□□□□ 0.38
SND1-209ENST00000470723 EDC4Q6P2E9 1401 aaKnown RBP17.44■□□□□ 0.38
SND1-209ENST00000470723 JCADQ9P266 1359 aa17.43■□□□□ 0.38
SND1-209ENST00000470723 MON2Q7Z3U7 1717 aa17.42■□□□□ 0.38
SND1-209ENST00000470723 TNS3Q68CZ2 1445 aa17.42■□□□□ 0.38
SND1-209ENST00000470723 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
SND1-209ENST00000470723 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
SND1-209ENST00000470723 ABTB2Q8N961 1025 aa17.41■□□□□ 0.38
SND1-209ENST00000470723 USP31Q70CQ4 1352 aa17.4■□□□□ 0.38
SND1-209ENST00000470723 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
SND1-209ENST00000470723 ALS2Q96Q42 1657 aa17.4■□□□□ 0.38
SND1-209ENST00000470723 FYB1O15117 783 aa17.4■□□□□ 0.38
SND1-209ENST00000470723 NLRP13Q86W25 1043 aa17.39■□□□□ 0.37
SND1-209ENST00000470723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.38■□□□□ 0.376e-7■■□□□ 11.4
SND1-209ENST00000470723 SPATA31A6Q5VVP1 1343 aa17.38■□□□□ 0.37
SND1-209ENST00000470723 NRKQ7Z2Y5 1582 aa17.37■□□□□ 0.37
SND1-209ENST00000470723 NLRP6P59044 892 aa17.37■□□□□ 0.37
SND1-209ENST00000470723 COL22A1Q8NFW1 1626 aaPredicted RBP17.36■□□□□ 0.37
SND1-209ENST00000470723 SHPRHQ149N8 1683 aa17.36■□□□□ 0.37
SND1-209ENST00000470723 NME9Q86XW9 330 aa17.36■□□□□ 0.37
SND1-209ENST00000470723 USP19O94966 1318 aa17.36■□□□□ 0.37
SND1-209ENST00000470723 AMER1Q5JTC6 1135 aaPredicted RBP17.35■□□□□ 0.37
SND1-209ENST00000470723 LMOD2Q6P5Q4 547 aa17.35■□□□□ 0.37
SND1-209ENST00000470723 KNSTRNQ9Y448 316 aa17.35■□□□□ 0.37
SND1-209ENST00000470723 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
SND1-209ENST00000470723 NSD3Q9BZ95 1437 aa17.34■□□□□ 0.37
SND1-209ENST00000470723 NPC1L1Q9UHC9 1359 aa17.34■□□□□ 0.37
SND1-209ENST00000470723 DDX10Q13206 875 aaKnown RBP17.33■□□□□ 0.36
SND1-209ENST00000470723 ZRANB1Q9UGI0 708 aa17.33■□□□□ 0.36
SND1-209ENST00000470723 PIK3C2AO00443 1686 aa17.32■□□□□ 0.36
SND1-209ENST00000470723 GCP02774 474 aa17.32■□□□□ 0.36
SND1-209ENST00000470723 NUTM2GQ5VZR2 741 aa17.32■□□□□ 0.36
SND1-209ENST00000470723 CABLES1Q8TDN4 633 aa17.32■□□□□ 0.36
SND1-209ENST00000470723 USP54Q70EL1 1684 aa17.32■□□□□ 0.36
SND1-209ENST00000470723 KCNH5Q8NCM2 988 aa17.31■□□□□ 0.36
SND1-209ENST00000470723 COG3Q96JB2 828 aa17.31■□□□□ 0.36
SND1-209ENST00000470723 OVOS2A0A0J9YW53 1432 aa17.3■□□□□ 0.36
SND1-209ENST00000470723 OVOS2Q6IE36 1432 aa17.3■□□□□ 0.36
SND1-209ENST00000470723 NSD2O96028 1365 aa17.3■□□□□ 0.36
SND1-209ENST00000470723 GGNBP2Q9H3C7 697 aa17.3■□□□□ 0.36
SND1-209ENST00000470723 RGS17Q9UGC6 210 aaPredicted RBP17.29■□□□□ 0.36
SND1-209ENST00000470723 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
SND1-209ENST00000470723 SLIT3O75094 1523 aa17.28■□□□□ 0.36
SND1-209ENST00000470723 CRYBG1Q9Y4K1 1723 aa17.28■□□□□ 0.36
SND1-209ENST00000470723 ARHGEF25Q86VW2 580 aa17.27■□□□□ 0.36
SND1-209ENST00000470723 CPDO75976 1380 aa17.27■□□□□ 0.35
SND1-209ENST00000470723 NUTM2BA6NNL0 878 aaPredicted RBP17.26■□□□□ 0.35
SND1-209ENST00000470723 NUTM2EB1AL46 878 aaPredicted RBP17.26■□□□□ 0.35
SND1-209ENST00000470723 NUTM2AQ8IVF1 878 aaPredicted RBP17.26■□□□□ 0.35
SND1-209ENST00000470723 FAM83GA6ND36 823 aa17.25■□□□□ 0.35
SND1-209ENST00000470723 KIF20BQ96Q89 1820 aa17.24■□□□□ 0.35
SND1-209ENST00000470723 FNBP4Q8N3X1 1017 aaPredicted RBP17.24■□□□□ 0.35
SND1-209ENST00000470723 LRP6O75581 1613 aa17.24■□□□□ 0.35
SND1-209ENST00000470723 AATKQ6ZMQ8 1374 aa17.24■□□□□ 0.35
SND1-209ENST00000470723 POTEAQ6S8J7 498 aa17.23■□□□□ 0.35
SND1-209ENST00000470723 NFAT5O94916 1531 aa17.22■□□□□ 0.35
SND1-209ENST00000470723 ABCA3Q99758 1704 aa17.22■□□□□ 0.35
SND1-209ENST00000470723 ADAMTS2O95450 1211 aa17.22■□□□□ 0.35
SND1-209ENST00000470723 HAP1P54257 671 aaPredicted RBP17.22■□□□□ 0.35
SND1-209ENST00000470723 ZC3H6P61129 1189 aaKnown RBP17.22■□□□□ 0.35
SND1-209ENST00000470723 MORC1Q86VD1 984 aa17.22■□□□□ 0.35
SND1-209ENST00000470723 PHRF1Q9P1Y6 1649 aaKnown RBP17.21■□□□□ 0.35
SND1-209ENST00000470723 KIAA0232Q92628 1395 aa17.21■□□□□ 0.35
SND1-209ENST00000470723 FBLN1P23142 703 aa17.2■□□□□ 0.34
SND1-209ENST00000470723 CC2D1BQ5T0F9 858 aaKnown RBP17.2■□□□□ 0.34
SND1-209ENST00000470723 POLKQ9UBT6 870 aa17.2■□□□□ 0.34
SND1-209ENST00000470723 ANKRD26Q9UPS8 1709 aa17.2■□□□□ 0.34
SND1-209ENST00000470723 KIF24Q5T7B8 1368 aa17.19■□□□□ 0.34
SND1-209ENST00000470723 PLEKHG5O94827 1062 aa17.19■□□□□ 0.34
SND1-209ENST00000470723 IP6K1Q92551 441 aa17.19■□□□□ 0.34
SND1-209ENST00000470723 NGLY1Q96IV0 654 aa17.19■□□□□ 0.34
SND1-209ENST00000470723 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
SND1-209ENST00000470723 MAP3K19Q56UN5 1328 aa17.18■□□□□ 0.34
SND1-209ENST00000470723 COL18A1P39060 1754 aa17.17■□□□□ 0.34
SND1-209ENST00000470723 SLIT2O94813 1529 aa17.17■□□□□ 0.34
SND1-209ENST00000470723 RALBP1Q15311 655 aa17.17■□□□□ 0.34
SND1-209ENST00000470723 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
SND1-209ENST00000470723 MAP2P11137 1827 aaKnown RBP17.17■□□□□ 0.34
SND1-209ENST00000470723 SOX12O15370 315 aa17.16■□□□□ 0.34
SND1-209ENST00000470723 MEX3CQ5U5Q3 659 aaKnown RBP17.16■□□□□ 0.34
SND1-209ENST00000470723 C8orf37Q96NL8 207 aa17.16■□□□□ 0.34
SND1-209ENST00000470723 PARD3Q8TEW0 1356 aa17.15■□□□□ 0.34
SND1-209ENST00000470723 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
SND1-209ENST00000470723 CHRNA2Q15822 529 aa17.15■□□□□ 0.34
SND1-209ENST00000470723 BCL9LQ86UU0 1499 aa17.15■□□□□ 0.34
SND1-209ENST00000470723 ABCC6O95255 1503 aa17.15■□□□□ 0.34
SND1-209ENST00000470723 COL14A1Q05707 1796 aaKnown RBP17.15■□□□□ 0.34
SND1-209ENST00000470723 HOXC9P31274 260 aa17.14■□□□□ 0.33
SND1-209ENST00000470723 UNC5CLQ8IV45 518 aa17.14■□□□□ 0.33
SND1-209ENST00000470723 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms