RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 SPHKAPQ2M3C7 1700 aa20.78■□□□□ 0.92
HOXB3-205ENST00000470495 ZHX1Q9UKY1 873 aaPredicted RBP20.78■□□□□ 0.92
HOXB3-205ENST00000470495 DMRT2Q9Y5R5 561 aa20.78■□□□□ 0.92
HOXB3-205ENST00000470495 RNF123Q5XPI4 1314 aa20.77■□□□□ 0.92
HOXB3-205ENST00000470495 HECW2Q9P2P5 1572 aa20.77■□□□□ 0.92
HOXB3-205ENST00000470495 NUTM2GQ5VZR2 741 aa20.77■□□□□ 0.92
HOXB3-205ENST00000470495 WDR63Q8IWG1 891 aa20.77■□□□□ 0.92
HOXB3-205ENST00000470495 DZIP1LQ8IYY4 767 aaKnown RBP20.77■□□□□ 0.92
HOXB3-205ENST00000470495 SLC4A3P48751 1232 aa20.77■□□□□ 0.91
HOXB3-205ENST00000470495 TMPOP42166 694 aaKnown RBP20.76■□□□□ 0.91
HOXB3-205ENST00000470495 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
HOXB3-205ENST00000470495 MYOM2P54296 1465 aa20.75■□□□□ 0.91
HOXB3-205ENST00000470495 CCDC61Q9Y6R9 512 aa20.75■□□□□ 0.91
HOXB3-205ENST00000470495 PPP6R1Q9UPN7 881 aa20.75■□□□□ 0.91
HOXB3-205ENST00000470495 EMILIN1Q9Y6C2 1016 aa20.75■□□□□ 0.91
HOXB3-205ENST00000470495 NKTRP30414 1462 aaKnown RBP20.75■□□□□ 0.91
HOXB3-205ENST00000470495 NPC1L1Q9UHC9 1359 aa20.75■□□□□ 0.91
HOXB3-205ENST00000470495 MADDQ8WXG6 1647 aa20.74■□□□□ 0.91
HOXB3-205ENST00000470495 WASLO00401 505 aaPredicted RBP20.74■□□□□ 0.91
HOXB3-205ENST00000470495 FAM161AQ3B820 660 aa20.74■□□□□ 0.91
HOXB3-205ENST00000470495 A0A1W2PP64 1363 aa20.74■□□□□ 0.91
HOXB3-205ENST00000470495 BLMP54132 1417 aaPredicted RBP20.74■□□□□ 0.91
HOXB3-205ENST00000470495 CFAP74Q9C0B2 1584 aa20.74■□□□□ 0.91
HOXB3-205ENST00000470495 INO80Q9ULG1 1556 aaPredicted RBP20.74■□□□□ 0.91
HOXB3-205ENST00000470495 THUMPD2Q9BTF0 503 aaKnown RBP20.74■□□□□ 0.91
HOXB3-205ENST00000470495 POLR3AO14802 1390 aaPredicted RBP20.73■□□□□ 0.91
HOXB3-205ENST00000470495 FAM13BQ9NYF5 915 aa20.73■□□□□ 0.91
HOXB3-205ENST00000470495 NCKAP5LQ9HCH0 1330 aa20.73■□□□□ 0.91
HOXB3-205ENST00000470495 PDE3AQ14432 1141 aa20.73■□□□□ 0.91
HOXB3-205ENST00000470495 RIMS2Q9UQ26 1411 aa20.72■□□□□ 0.91
HOXB3-205ENST00000470495 VGLL3A8MV65 326 aa20.72■□□□□ 0.91
HOXB3-205ENST00000470495 ABCC3O15438 1527 aa20.72■□□□□ 0.91
HOXB3-205ENST00000470495 KIF1BO60333 1816 aa20.72■□□□□ 0.91
HOXB3-205ENST00000470495 YTHDC2Q9H6S0 1430 aaKnown RBP20.72■□□□□ 0.91
HOXB3-205ENST00000470495 RNF17Q9BXT8 1623 aaKnown RBP20.72■□□□□ 0.91
HOXB3-205ENST00000470495 ZNF526Q8TF50 670 aaPredicted RBP20.71■□□□□ 0.91
HOXB3-205ENST00000470495 RARSP54136 660 aaKnown RBP20.71■□□□□ 0.91
HOXB3-205ENST00000470495 LMOD3Q0VAK6 560 aa20.71■□□□□ 0.91
HOXB3-205ENST00000470495 APBB1O00213 710 aa20.7■□□□□ 0.91
HOXB3-205ENST00000470495 ZRANB1Q9UGI0 708 aa20.7■□□□□ 0.9
HOXB3-205ENST00000470495 BACH2Q9BYV9 841 aa20.7■□□□□ 0.9
HOXB3-205ENST00000470495 BECN1Q14457 450 aa20.69■□□□□ 0.9
HOXB3-205ENST00000470495 KDM5AP29375 1690 aaKnown RBP20.69■□□□□ 0.9
HOXB3-205ENST00000470495 MAP3K4Q9Y6R4 1608 aa20.68■□□□□ 0.9
HOXB3-205ENST00000470495 POLR1AO95602 1720 aaPredicted RBP20.68■□□□□ 0.9
HOXB3-205ENST00000470495 NSD2O96028 1365 aa20.68■□□□□ 0.9
HOXB3-205ENST00000470495 ZMYM3Q14202 1370 aa20.68■□□□□ 0.9
HOXB3-205ENST00000470495 SBNO2Q9Y2G9 1366 aa20.68■□□□□ 0.9
HOXB3-205ENST00000470495 CEP152O94986 1710 aa20.67■□□□□ 0.9
HOXB3-205ENST00000470495 KIDINS220Q9ULH0 1771 aa20.67■□□□□ 0.9
HOXB3-205ENST00000470495 ZMYM4Q5VZL5 1548 aa20.67■□□□□ 0.9
HOXB3-205ENST00000470495 TNRQ92752 1358 aa20.67■□□□□ 0.9
HOXB3-205ENST00000470495 SULT6B1Q6IMI4 303 aa20.66■□□□□ 0.9
HOXB3-205ENST00000470495 NOB1Q9ULX3 412 aaKnown RBP20.66■□□□□ 0.9
HOXB3-205ENST00000470495 SYNMO15061 1565 aa20.66■□□□□ 0.9
HOXB3-205ENST00000470495 TSPOAP1O95153 1857 aa20.66■□□□□ 0.9
HOXB3-205ENST00000470495 FAM43AQ8N2R8 423 aa20.66■□□□□ 0.9
HOXB3-205ENST00000470495 PPRC1Q5VV67 1664 aaKnown RBP20.66■□□□□ 0.9
HOXB3-205ENST00000470495 FCHSD2O94868 740 aa20.65■□□□□ 0.9
HOXB3-205ENST00000470495 NLRP6P59044 892 aa20.65■□□□□ 0.9
HOXB3-205ENST00000470495 THEMISQ8N1K5 641 aaPredicted RBP20.65■□□□□ 0.9
HOXB3-205ENST00000470495 SPRYD3Q8NCJ5 442 aa20.65■□□□□ 0.9
HOXB3-205ENST00000470495 PUS7Q96PZ0 661 aaKnown RBP20.65■□□□□ 0.9
HOXB3-205ENST00000470495 ZNF692Q9BU19 519 aaPredicted RBP20.65■□□□□ 0.9
HOXB3-205ENST00000470495 DDX19BQ9UMR2 479 aa20.65■□□□□ 0.9
HOXB3-205ENST00000470495 TNNQ9UQP3 1299 aa20.64■□□□□ 0.89
HOXB3-205ENST00000470495 RBM33Q96EV2 1170 aaKnown RBP20.64■□□□□ 0.89
HOXB3-205ENST00000470495 GNAI1P63096 354 aa20.64■□□□□ 0.89
HOXB3-205ENST00000470495 NINLQ9Y2I6 1382 aa20.63■□□□□ 0.89
HOXB3-205ENST00000470495 SLC4A10Q6U841 1118 aa20.63■□□□□ 0.89
HOXB3-205ENST00000470495 CFAP44Q96MT7 982 aa20.63■□□□□ 0.89
HOXB3-205ENST00000470495 DCTN1Q14203 1278 aa20.62■□□□□ 0.89
HOXB3-205ENST00000470495 AMOTL2Q9Y2J4 779 aa20.62■□□□□ 0.89
HOXB3-205ENST00000470495 ABCA6Q8N139 1617 aa20.62■□□□□ 0.89
HOXB3-205ENST00000470495 SSH1Q8WYL5 1049 aa20.62■□□□□ 0.89
HOXB3-205ENST00000470495 MFAP1P55081 439 aaKnown RBP20.62■□□□□ 0.89
HOXB3-205ENST00000470495 KIF16BQ96L93 1317 aa20.61■□□□□ 0.89
HOXB3-205ENST00000470495 L1TD1Q5T7N2 865 aaKnown RBP20.6■□□□□ 0.89
HOXB3-205ENST00000470495 POLKQ9UBT6 870 aa20.6■□□□□ 0.89
HOXB3-205ENST00000470495 IGHDP01880 384 aa20.59■□□□□ 0.89
HOXB3-205ENST00000470495 NFE2L2Q16236 605 aa20.59■□□□□ 0.89
HOXB3-205ENST00000470495 SLKQ9H2G2 1235 aaPredicted RBP20.59■□□□□ 0.89
HOXB3-205ENST00000470495 PRDM10Q9NQV6 1147 aa20.59■□□□□ 0.89
HOXB3-205ENST00000470495 PDZRN3Q9UPQ7 1066 aa20.59■□□□□ 0.89
HOXB3-205ENST00000470495 MVPQ14764 893 aaKnown RBP20.58■□□□□ 0.89
HOXB3-205ENST00000470495 ATF7IPQ6VMQ6 1270 aa20.58■□□□□ 0.89
HOXB3-205ENST00000470495 NECTIN2Q92692 538 aa20.58■□□□□ 0.89
HOXB3-205ENST00000470495 INSRP06213 1382 aa20.58■□□□□ 0.89
HOXB3-205ENST00000470495 PPIP5K1Q6PFW1 1433 aa20.58■□□□□ 0.88
HOXB3-205ENST00000470495 ADGRB3O60242 1522 aa20.57■□□□□ 0.88
HOXB3-205ENST00000470495 ANKRD45Q5TZF3 282 aa20.57■□□□□ 0.88
HOXB3-205ENST00000470495 LAMC1P11047 1609 aa20.57■□□□□ 0.88
HOXB3-205ENST00000470495 C1orf115Q9H7X2 142 aa20.57■□□□□ 0.88
HOXB3-205ENST00000470495 TWISTNBQ3B726 338 aaPredicted RBP20.57■□□□□ 0.88
HOXB3-205ENST00000470495 ABTB2Q8N961 1025 aa20.57■□□□□ 0.88
HOXB3-205ENST00000470495 ZNF521Q96K83 1311 aa20.56■□□□□ 0.88
HOXB3-205ENST00000470495 LMTK2Q8IWU2 1503 aa20.56■□□□□ 0.88
HOXB3-205ENST00000470495 LNPKQ9C0E8 428 aa20.56■□□□□ 0.88
HOXB3-205ENST00000470495 ACEP12821 1306 aa20.55■□□□□ 0.88
HOXB3-205ENST00000470495 RLBP1P12271 317 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms