RNA–Protein interactions for RNA: ENST00000470314.5

NINJ1-203, Transcript of ninjurin 1, humanhuman

TSL 3

Gene NINJ1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-203ENST00000470314 PTCH1Q13635 1447 aa17.89■□□□□ 0.45
NINJ1-203ENST00000470314 DIAPH1O60610 1272 aaKnown RBP17.88■□□□□ 0.45
NINJ1-203ENST00000470314 B4GALNT3Q6L9W6 998 aa17.88■□□□□ 0.45
NINJ1-203ENST00000470314 PLEKHF1Q96S99 279 aa17.88■□□□□ 0.45
NINJ1-203ENST00000470314 POLKQ9UBT6 870 aa17.88■□□□□ 0.45
NINJ1-203ENST00000470314 COL3A1P02461 1466 aaPredicted RBP17.88■□□□□ 0.45
NINJ1-203ENST00000470314 KIF20BQ96Q89 1820 aa17.87■□□□□ 0.45
NINJ1-203ENST00000470314 FCHSD2O94868 740 aa17.87■□□□□ 0.45
NINJ1-203ENST00000470314 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
NINJ1-203ENST00000470314 NKTRP30414 1462 aaKnown RBP17.87■□□□□ 0.45
NINJ1-203ENST00000470314 ANKLE2Q86XL3 938 aa17.86■□□□□ 0.45
NINJ1-203ENST00000470314 PRR36Q9H6K5 1346 aa17.86■□□□□ 0.45
NINJ1-203ENST00000470314 IQSEC2Q5JU85 1478 aa17.86■□□□□ 0.45
NINJ1-203ENST00000470314 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
NINJ1-203ENST00000470314 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.85■□□□□ 0.45
NINJ1-203ENST00000470314 COG3Q96JB2 828 aa17.84■□□□□ 0.45
NINJ1-203ENST00000470314 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
NINJ1-203ENST00000470314 ADAMTSL3P82987 1691 aa17.83■□□□□ 0.45
NINJ1-203ENST00000470314 CEP170BQ9Y4F5 1589 aaPredicted RBP17.83■□□□□ 0.45
NINJ1-203ENST00000470314 EXOC6Q8TAG9 804 aa17.83■□□□□ 0.44
NINJ1-203ENST00000470314 SETD1BQ9UPS6 1966 aaKnown RBP17.82■□□□□ 0.44
NINJ1-203ENST00000470314 AKAP12Q02952 1782 aa17.82■□□□□ 0.44
NINJ1-203ENST00000470314 MON2Q7Z3U7 1717 aa17.82■□□□□ 0.44
NINJ1-203ENST00000470314 ACEP12821 1306 aa17.81■□□□□ 0.44
NINJ1-203ENST00000470314 IL16Q14005 1332 aa17.81■□□□□ 0.44
NINJ1-203ENST00000470314 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
NINJ1-203ENST00000470314 CT47B1P0C2W7 299 aaPredicted RBP17.81■□□□□ 0.44
NINJ1-203ENST00000470314 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
NINJ1-203ENST00000470314 TMPOP42166 694 aaKnown RBP17.8■□□□□ 0.44
NINJ1-203ENST00000470314 NME9Q86XW9 330 aa17.8■□□□□ 0.44
NINJ1-203ENST00000470314 MYH16Q9H6N6 1097 aa17.8■□□□□ 0.44
NINJ1-203ENST00000470314 TTC21AQ8NDW8 1320 aa17.79■□□□□ 0.44
NINJ1-203ENST00000470314 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
NINJ1-203ENST00000470314 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
NINJ1-203ENST00000470314 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
NINJ1-203ENST00000470314 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
NINJ1-203ENST00000470314 ANKARQ7Z5J8 1434 aa17.78■□□□□ 0.44
NINJ1-203ENST00000470314 RIMS1Q86UR5 1692 aaKnown RBP17.77■□□□□ 0.44
NINJ1-203ENST00000470314 TOPAZ1Q8N9V7 1692 aa17.77■□□□□ 0.44
NINJ1-203ENST00000470314 MAPK8IP3Q9UPT6 1336 aa17.77■□□□□ 0.44
NINJ1-203ENST00000470314 IL13P35225 146 aa17.77■□□□□ 0.44
NINJ1-203ENST00000470314 XRN1Q8IZH2 1706 aaKnown RBP17.77■□□□□ 0.44
NINJ1-203ENST00000470314 ZNF142P52746 1687 aaPredicted RBP17.77■□□□□ 0.43
NINJ1-203ENST00000470314 ITSN1Q15811 1721 aa17.76■□□□□ 0.43
NINJ1-203ENST00000470314 USP6P35125 1406 aa17.76■□□□□ 0.43
NINJ1-203ENST00000470314 PLIN1O60240 522 aa17.76■□□□□ 0.43
NINJ1-203ENST00000470314 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
NINJ1-203ENST00000470314 NEUROD2Q15784 382 aa17.76■□□□□ 0.43
NINJ1-203ENST00000470314 RRP7AQ9Y3A4 280 aaKnown RBP17.76■□□□□ 0.43
NINJ1-203ENST00000470314 CDK12Q9NYV4 1490 aaPredicted RBP17.75■□□□□ 0.43
NINJ1-203ENST00000470314 NEFMP07197 916 aa17.75■□□□□ 0.43
NINJ1-203ENST00000470314 CRBNQ96SW2 442 aa17.75■□□□□ 0.43
NINJ1-203ENST00000470314 TRIM35Q9UPQ4 493 aa17.75■□□□□ 0.43
NINJ1-203ENST00000470314 USP31Q70CQ4 1352 aa17.75■□□□□ 0.43
NINJ1-203ENST00000470314 MAP2P11137 1827 aaKnown RBP17.75■□□□□ 0.43
NINJ1-203ENST00000470314 KCNA6P17658 529 aa17.74■□□□□ 0.43
NINJ1-203ENST00000470314 AAMPQ13685 434 aa17.74■□□□□ 0.43
NINJ1-203ENST00000470314 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
NINJ1-203ENST00000470314 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
NINJ1-203ENST00000470314 RBM19Q9Y4C8 960 aaKnown RBP17.73■□□□□ 0.43
NINJ1-203ENST00000470314 RIPK4P57078 832 aa17.72■□□□□ 0.43
NINJ1-203ENST00000470314 EMILIN1Q9Y6C2 1016 aa17.72■□□□□ 0.43
NINJ1-203ENST00000470314 RARSP54136 660 aaKnown RBP17.71■□□□□ 0.43
NINJ1-203ENST00000470314 OVOS2A0A0J9YW53 1432 aa17.71■□□□□ 0.43
NINJ1-203ENST00000470314 OVOS2Q6IE36 1432 aa17.71■□□□□ 0.43
NINJ1-203ENST00000470314 PPM1GO15355 546 aaPredicted RBP17.7■□□□□ 0.42
NINJ1-203ENST00000470314 BCAR3O75815 825 aa17.7■□□□□ 0.42
NINJ1-203ENST00000470314 FBLN1P23142 703 aa17.7■□□□□ 0.42
NINJ1-203ENST00000470314 CALD1Q05682 793 aaKnown RBP17.7■□□□□ 0.42
NINJ1-203ENST00000470314 CHD2O14647 1828 aaKnown RBP17.7■□□□□ 0.42
NINJ1-203ENST00000470314 NRKQ7Z2Y5 1582 aa17.7■□□□□ 0.42
NINJ1-203ENST00000470314 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
NINJ1-203ENST00000470314 C20orf194Q5TEA3 1177 aa17.69■□□□□ 0.42
NINJ1-203ENST00000470314 NGDNQ8NEJ9 315 aaKnown RBP17.69■□□□□ 0.42
NINJ1-203ENST00000470314 PRKAR2BP31323 418 aa17.68■□□□□ 0.42
NINJ1-203ENST00000470314 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
NINJ1-203ENST00000470314 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
NINJ1-203ENST00000470314 MS4A1P11836 297 aa17.66■□□□□ 0.42
NINJ1-203ENST00000470314 LMOD3Q0VAK6 560 aa17.66■□□□□ 0.42
NINJ1-203ENST00000470314 KIF24Q5T7B8 1368 aa17.66■□□□□ 0.42
NINJ1-203ENST00000470314 NPHP4O75161 1426 aaPredicted RBP17.65■□□□□ 0.42
NINJ1-203ENST00000470314 NUTM2FA1L443 756 aa17.65■□□□□ 0.42
NINJ1-203ENST00000470314 RRS1Q15050 365 aaKnown RBP17.65■□□□□ 0.42
NINJ1-203ENST00000470314 AEBP2Q6ZN18 517 aaPredicted RBP17.65■□□□□ 0.42
NINJ1-203ENST00000470314 PMFBP1Q8TBY8 1022 aa17.65■□□□□ 0.42
NINJ1-203ENST00000470314 CENPQQ7L2Z9 268 aaPredicted RBP17.63■□□□□ 0.41
NINJ1-203ENST00000470314 PHACTR3Q96KR7 559 aa17.63■□□□□ 0.41
NINJ1-203ENST00000470314 FANCIQ9NVI1 1328 aa17.63■□□□□ 0.41
NINJ1-203ENST00000470314 NALCNQ8IZF0 1738 aa17.63■□□□□ 0.41
NINJ1-203ENST00000470314 FMN2Q9NZ56 1722 aa17.63■□□□□ 0.41
NINJ1-203ENST00000470314 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
NINJ1-203ENST00000470314 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
NINJ1-203ENST00000470314 KDM2BQ8NHM5 1336 aa17.62■□□□□ 0.41
NINJ1-203ENST00000470314 EXOSC9Q06265 439 aaKnown RBP17.61■□□□□ 0.41
NINJ1-203ENST00000470314 PHF8Q9UPP1 1060 aa17.61■□□□□ 0.41
NINJ1-203ENST00000470314 LRRC7Q96NW7 1537 aa17.61■□□□□ 0.41
NINJ1-203ENST00000470314 HMOX1P09601 288 aa17.6■□□□□ 0.41
NINJ1-203ENST00000470314 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
NINJ1-203ENST00000470314 GNAI1P63096 354 aa17.6■□□□□ 0.41
NINJ1-203ENST00000470314 ALDH1L2Q3SY69 923 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms