RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 NGLY1Q96IV0 654 aa27.04■■□□□ 1.92
PCGF3-208ENST00000470161 CDCA8Q53HL2 280 aa27.03■■□□□ 1.92
PCGF3-208ENST00000470161 CABLES1Q8TDN4 633 aa27.02■■□□□ 1.92
PCGF3-208ENST00000470161 ABTB2Q8N961 1025 aa27.01■■□□□ 1.92
PCGF3-208ENST00000470161 TRPM3Q9HCF6 1732 aaPredicted RBP27.01■■□□□ 1.91
PCGF3-208ENST00000470161 ZNF772Q68DY9 489 aaPredicted RBP27■■□□□ 1.91
PCGF3-208ENST00000470161 RGS17Q9UGC6 210 aaPredicted RBP26.99■■□□□ 1.91
PCGF3-208ENST00000470161 BRD4O60885 1362 aaPredicted RBP26.99■■□□□ 1.91
PCGF3-208ENST00000470161 NUTM2GQ5VZR2 741 aa26.98■■□□□ 1.91
PCGF3-208ENST00000470161 HDGFL2Q7Z4V5 671 aaPredicted RBP26.98■■□□□ 1.91
PCGF3-208ENST00000470161 SLC12A5Q9H2X9 1139 aa26.98■■□□□ 1.91
PCGF3-208ENST00000470161 USP6P35125 1406 aa26.98■■□□□ 1.91
PCGF3-208ENST00000470161 AFF2P51816 1311 aa26.98■■□□□ 1.91
PCGF3-208ENST00000470161 TERF2IPQ9NYB0 399 aa26.98■■□□□ 1.91
PCGF3-208ENST00000470161 HSPA5P11021 654 aaKnown RBP26.97■■□□□ 1.91
PCGF3-208ENST00000470161 KTN1Q86UP2 1357 aaKnown RBP26.96■■□□□ 1.91
PCGF3-208ENST00000470161 ALS2Q96Q42 1657 aa26.95■■□□□ 1.91
PCGF3-208ENST00000470161 DIEXFQ68CQ4 756 aaKnown RBP26.95■■□□□ 1.9
PCGF3-208ENST00000470161 NLRP13Q86W25 1043 aa26.94■■□□□ 1.9
PCGF3-208ENST00000470161 NINLQ9Y2I6 1382 aa26.93■■□□□ 1.9
PCGF3-208ENST00000470161 CPSF1Q10570 1443 aaKnown RBP26.92■■□□□ 1.9
PCGF3-208ENST00000470161 NLRP6P59044 892 aa26.91■■□□□ 1.9
PCGF3-208ENST00000470161 POTEAQ6S8J7 498 aa26.91■■□□□ 1.9
PCGF3-208ENST00000470161 POLR3GLQ9BT43 218 aa26.91■■□□□ 1.9
PCGF3-208ENST00000470161 USP21Q9UK80 565 aa26.91■■□□□ 1.9
PCGF3-208ENST00000470161 TTC21BQ7Z4L5 1316 aa26.9■■□□□ 1.9
PCGF3-208ENST00000470161 ILDR2Q71H61 639 aa26.9■■□□□ 1.9
PCGF3-208ENST00000470161 TTC21AQ8NDW8 1320 aa26.89■■□□□ 1.9
PCGF3-208ENST00000470161 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.89■■□□□ 1.893e-6■■□□□ 12.5
PCGF3-208ENST00000470161 FNBP4Q8N3X1 1017 aaPredicted RBP26.89■■□□□ 1.89
PCGF3-208ENST00000470161 AKAP12Q02952 1782 aa26.86■■□□□ 1.89
PCGF3-208ENST00000470161 QTRT2Q9H974 415 aaKnown RBP26.86■■□□□ 1.89
PCGF3-208ENST00000470161 SSH2Q76I76 1423 aa26.86■■□□□ 1.89
PCGF3-208ENST00000470161 A0A1W2PP64 1363 aa26.86■■□□□ 1.89
PCGF3-208ENST00000470161 MARF1Q9Y4F3 1742 aaKnown RBP26.85■■□□□ 1.89
PCGF3-208ENST00000470161 PRDM11Q9NQV5 511 aa26.85■■□□□ 1.89
PCGF3-208ENST00000470161 CD163L1Q9NR16 1453 aa26.84■■□□□ 1.89
PCGF3-208ENST00000470161 ZC3H6P61129 1189 aaKnown RBP26.83■■□□□ 1.89
PCGF3-208ENST00000470161 ABCA3Q99758 1704 aa26.83■■□□□ 1.89
PCGF3-208ENST00000470161 FAM83GA6ND36 823 aa26.82■■□□□ 1.88
PCGF3-208ENST00000470161 EDC4Q6P2E9 1401 aaKnown RBP26.82■■□□□ 1.88
PCGF3-208ENST00000470161 GCP02774 474 aa26.82■■□□□ 1.88
PCGF3-208ENST00000470161 RXRBP28702 533 aa26.82■■□□□ 1.88
PCGF3-208ENST00000470161 TRPC5Q9UL62 973 aaPredicted RBP26.82■■□□□ 1.88
PCGF3-208ENST00000470161 ANKRD36BQ8N2N9 1353 aa26.81■■□□□ 1.88
PCGF3-208ENST00000470161 USP19O94966 1318 aa26.81■■□□□ 1.88
PCGF3-208ENST00000470161 UNC5CLQ8IV45 518 aa26.8■■□□□ 1.88
PCGF3-208ENST00000470161 MON2Q7Z3U7 1717 aa26.8■■□□□ 1.88
PCGF3-208ENST00000470161 KIAA0232Q92628 1395 aa26.79■■□□□ 1.88
PCGF3-208ENST00000470161 BCL9LQ86UU0 1499 aa26.77■■□□□ 1.88
PCGF3-208ENST00000470161 RBM6P78332 1123 aaKnown RBP26.77■■□□□ 1.88
PCGF3-208ENST00000470161 NME9Q86XW9 330 aa26.77■■□□□ 1.88
PCGF3-208ENST00000470161 KCNH5Q8NCM2 988 aa26.77■■□□□ 1.88
PCGF3-208ENST00000470161 BTG4Q9NY30 223 aa26.77■■□□□ 1.88
PCGF3-208ENST00000470161 SLIT2O94813 1529 aa26.77■■□□□ 1.88
PCGF3-208ENST00000470161 ZBTB7CA1YPR0 619 aa26.76■■□□□ 1.87
PCGF3-208ENST00000470161 PIK3C2AO00443 1686 aa26.76■■□□□ 1.87
PCGF3-208ENST00000470161 PHRF1Q9P1Y6 1649 aaKnown RBP26.76■■□□□ 1.87
PCGF3-208ENST00000470161 NRKQ7Z2Y5 1582 aa26.76■■□□□ 1.87
PCGF3-208ENST00000470161 CRYBG1Q9Y4K1 1723 aa26.76■■□□□ 1.87
PCGF3-208ENST00000470161 SOX12O15370 315 aa26.76■■□□□ 1.87
PCGF3-208ENST00000470161 CHRNA2Q15822 529 aa26.76■■□□□ 1.87
PCGF3-208ENST00000470161 CCDC9Q9Y3X0 531 aaKnown RBP26.75■■□□□ 1.87
PCGF3-208ENST00000470161 ZRANB1Q9UGI0 708 aa26.73■■□□□ 1.87
PCGF3-208ENST00000470161 COL14A1Q05707 1796 aaKnown RBP26.72■■□□□ 1.87
PCGF3-208ENST00000470161 MYOM1P52179 1685 aa26.71■■□□□ 1.87
PCGF3-208ENST00000470161 CPDO75976 1380 aa26.71■■□□□ 1.87
PCGF3-208ENST00000470161 USP31Q70CQ4 1352 aa26.71■■□□□ 1.87
PCGF3-208ENST00000470161 ATRNO75882 1429 aa26.7■■□□□ 1.87
PCGF3-208ENST00000470161 COG3Q96JB2 828 aa26.7■■□□□ 1.87
PCGF3-208ENST00000470161 EVA1CP58658 441 aa26.7■■□□□ 1.86
PCGF3-208ENST00000470161 GJD4Q96KN9 370 aaPredicted RBP26.7■■□□□ 1.86
PCGF3-208ENST00000470161 PLCH1Q4KWH8 1693 aa26.69■■□□□ 1.86
PCGF3-208ENST00000470161 C11orf95C9JLR9 678 aaPredicted RBP26.69■■□□□ 1.86
PCGF3-208ENST00000470161 NWD2Q9ULI1 1742 aa26.69■■□□□ 1.86
PCGF3-208ENST00000470161 SLIT3O75094 1523 aa26.68■■□□□ 1.86
PCGF3-208ENST00000470161 VPS72Q15906 364 aa26.68■■□□□ 1.86
PCGF3-208ENST00000470161 STRN4Q9NRL3 753 aa26.67■■□□□ 1.86
PCGF3-208ENST00000470161 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.66■■□□□ 1.86
PCGF3-208ENST00000470161 CARD14Q9BXL6 1004 aa26.65■■□□□ 1.86
PCGF3-208ENST00000470161 KIF7Q2M1P5 1343 aa26.64■■□□□ 1.86
PCGF3-208ENST00000470161 NSD3Q9BZ95 1437 aa26.64■■□□□ 1.85
PCGF3-208ENST00000470161 FYB1O15117 783 aa26.63■■□□□ 1.85
PCGF3-208ENST00000470161 ARHGEF25Q86VW2 580 aa26.63■■□□□ 1.85
PCGF3-208ENST00000470161 GGNBP2Q9H3C7 697 aa26.63■■□□□ 1.85
PCGF3-208ENST00000470161 PANK3Q9H999 370 aa26.63■■□□□ 1.85
PCGF3-208ENST00000470161 CDK12Q9NYV4 1490 aaPredicted RBP26.62■■□□□ 1.85
PCGF3-208ENST00000470161 SOCS7O14512 581 aa26.62■■□□□ 1.85
PCGF3-208ENST00000470161 AATKQ6ZMQ8 1374 aa26.62■■□□□ 1.85
PCGF3-208ENST00000470161 CGNL1Q0VF96 1302 aa26.61■■□□□ 1.85
PCGF3-208ENST00000470161 OVOS2A0A0J9YW53 1432 aa26.61■■□□□ 1.85
PCGF3-208ENST00000470161 OVOS2Q6IE36 1432 aa26.61■■□□□ 1.85
PCGF3-208ENST00000470161 A0A0G2JS52 829 aa26.58■■□□□ 1.85
PCGF3-208ENST00000470161 MYT1Q01538 1121 aa26.58■■□□□ 1.85
PCGF3-208ENST00000470161 USP54Q70EL1 1684 aa26.58■■□□□ 1.85
PCGF3-208ENST00000470161 NFAT5O94916 1531 aa26.58■■□□□ 1.84
PCGF3-208ENST00000470161 NRAPQ86VF7 1730 aa26.57■■□□□ 1.84
PCGF3-208ENST00000470161 CAMTA1Q9Y6Y1 1673 aa26.57■■□□□ 1.84
PCGF3-208ENST00000470161 USP35Q9P2H5 1018 aa26.57■■□□□ 1.84
PCGF3-208ENST00000470161 SPATA31A5Q5VU36 1347 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms